RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 SCN1BQ07699 218 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 SNAI3Q3KNW1 292 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 LINC00303Q3SY05 128 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 ZBTB37Q5TC79 503 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 HACD4Q5VWC8 232 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 RTL6Q6ICC9 239 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 OR8H2Q8N162 312 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 C17orf78Q8N4C9 275 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 OR51A2Q8NGJ7 313 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 SPSB4Q96A44 273 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 PTX4Q96A99 478 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 SGK3Q96BR1 496 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 HAVCR1Q96D42 359 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 REEP6Q96HR9 211 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 CHST5Q9GZS9 411 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 TP63Q9H3D4 680 aaPredicted RBP12.35□□□□□ -0.43
SDF2-201ENST00000247020 OPA3Q9H6K4 179 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 PROCRQ9UNN8 238 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 FAM215AQ9Y5M1 114 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 A0A0B4J203 849 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 LOC100289279A0A1B0GTE1 492 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 CTDSPLO15194 276 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 TNFSF13O75888 250 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 PTTG1O95997 202 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 CGAP01215 116 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 TMIGD3P0DMS9 266 aaPredicted RBP12.35□□□□□ -0.43
SDF2-201ENST00000247020 STOMP27105 288 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 MAP2K3P46734 347 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 ART1P52961 327 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 SPOCK1Q08629 439 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 OXA1LQ15070 435 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 P2RY6Q15077 328 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 P2RY14Q15391 338 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 GFOD2Q3B7J2 385 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 C1QTNF12Q5T7M4 302 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 Q6ZNX1 250 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 DCDC5Q6ZRR9 648 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 BEND4Q6ZU67 534 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 SEM1Q6ZVN7 128 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 Q8N402 240 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 SEMA6DQ8NFY4 1073 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 OR13C9Q8NGT0 318 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 SLC25A28Q96A46 364 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 FAM3DQ96BQ1 224 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 SLC25A38Q96DW6 304 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 S100A16Q96FQ6 103 aaKnown RBP12.35□□□□□ -0.43
SDF2-201ENST00000247020 POM121L2Q96KW2 1035 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 NEK6Q9HC98 313 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 OBP2BQ9NPH6 170 aa12.35□□□□□ -0.43
SDF2-201ENST00000247020 ZNF71Q9NQZ8 489 aaPredicted RBP12.35□□□□□ -0.43
SDF2-201ENST00000247020 ANKRD11Q6UB99 2663 aaPredicted RBP12.34□□□□□ -0.43
SDF2-201ENST00000247020 PTPRQQ9UMZ3 2332 aa12.34□□□□□ -0.43
SDF2-201ENST00000247020 ZNF503-AS2A6NEH8 195 aa12.34□□□□□ -0.43
SDF2-201ENST00000247020 PRRG2O14669 202 aa12.34□□□□□ -0.43
SDF2-201ENST00000247020 MAGEB3O15480 346 aa12.34□□□□□ -0.43
SDF2-201ENST00000247020 ZNHIT1O43257 154 aa12.34□□□□□ -0.43
SDF2-201ENST00000247020 CSF3P09919 207 aa12.34□□□□□ -0.43
SDF2-201ENST00000247020 ANOS1P23352 680 aa12.34□□□□□ -0.43
SDF2-201ENST00000247020 AZGP1P25311 298 aaKnown RBP12.34□□□□□ -0.43
SDF2-201ENST00000247020 CEACAM8P31997 349 aaPredicted RBP12.34□□□□□ -0.43
SDF2-201ENST00000247020 APLNRP35414 380 aa12.34□□□□□ -0.43
SDF2-201ENST00000247020 CLDN12P56749 244 aa12.34□□□□□ -0.43
SDF2-201ENST00000247020 MRPS10P82664 201 aaKnown RBP12.34□□□□□ -0.43
SDF2-201ENST00000247020 RIPPLY1Q0D2K3 151 aa12.34□□□□□ -0.43
SDF2-201ENST00000247020 GABRA6Q16445 453 aa12.34□□□□□ -0.43
SDF2-201ENST00000247020 BAK1Q16611 211 aa12.34□□□□□ -0.43
SDF2-201ENST00000247020 HIKESHIQ53FT3 197 aa12.34□□□□□ -0.43
SDF2-201ENST00000247020 GLYATL3Q5SZD4 288 aa12.34□□□□□ -0.43
SDF2-201ENST00000247020 VWA1Q6PCB0 445 aa12.34□□□□□ -0.43
SDF2-201ENST00000247020 UNQ6494/PRO21346Q6UXR6 183 aa12.34□□□□□ -0.43
SDF2-201ENST00000247020 SNX29P2Q8IUI4 249 aa12.34□□□□□ -0.43
SDF2-201ENST00000247020 CMTM4Q8IZR5 234 aa12.34□□□□□ -0.43
SDF2-201ENST00000247020 GABRG1Q8N1C3 465 aa12.34□□□□□ -0.43
SDF2-201ENST00000247020 CENPSQ8N2Z9 138 aa12.34□□□□□ -0.43
SDF2-201ENST00000247020 JAGN1Q8N5M9 183 aa12.34□□□□□ -0.43
SDF2-201ENST00000247020 SYNPRQ8TBG9 265 aa12.34□□□□□ -0.43
SDF2-201ENST00000247020 SSC4DQ8WTU2 575 aa12.34□□□□□ -0.43
SDF2-201ENST00000247020 APOBEC3DQ96AK3 386 aaPredicted RBP12.34□□□□□ -0.43
SDF2-201ENST00000247020 STARD4Q96DR4 205 aa12.34□□□□□ -0.43
SDF2-201ENST00000247020 ZNF75AQ96N20 296 aa12.34□□□□□ -0.43
SDF2-201ENST00000247020 SOX7Q9BT81 388 aa12.34□□□□□ -0.43
SDF2-201ENST00000247020 SFXN3Q9BWM7 321 aa12.34□□□□□ -0.43
SDF2-201ENST00000247020 RHBDL2Q9NX52 303 aa12.34□□□□□ -0.43
SDF2-201ENST00000247020 LUZP4Q9P127 313 aa12.34□□□□□ -0.43
SDF2-201ENST00000247020 ZNF835Q9Y2P0 537 aa12.34□□□□□ -0.43
SDF2-201ENST00000247020 RHBDD3Q9Y3P4 386 aa12.34□□□□□ -0.43
SDF2-201ENST00000247020 CFAP47Q6ZTR5 3102 aa12.34□□□□□ -0.43
SDF2-201ENST00000247020 LOC100509620A0A075B734 347 aa12.33□□□□□ -0.44
SDF2-201ENST00000247020 hCG_38984A0A1B0GV85 526 aa12.33□□□□□ -0.44
SDF2-201ENST00000247020 CIB4A0PJX0 185 aa12.33□□□□□ -0.44
SDF2-201ENST00000247020 TMEM8BA6NDV4 472 aa12.33□□□□□ -0.44
SDF2-201ENST00000247020 PRF1P14222 555 aa12.33□□□□□ -0.44
SDF2-201ENST00000247020 ARSBP15848 533 aa12.33□□□□□ -0.44
SDF2-201ENST00000247020 POU3F4P49335 361 aa12.33□□□□□ -0.44
SDF2-201ENST00000247020 MMP15P51511 669 aa12.33□□□□□ -0.44
SDF2-201ENST00000247020 UBE2NP61088 152 aaKnown RBP12.33□□□□□ -0.44
SDF2-201ENST00000247020 OR8B8Q15620 311 aa12.33□□□□□ -0.44
SDF2-201ENST00000247020 TRIM16LQ309B1 348 aa12.33□□□□□ -0.44
SDF2-201ENST00000247020 C2orf76Q3KRA6 126 aa12.33□□□□□ -0.44
SDF2-201ENST00000247020 OR5AS1Q8N127 324 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms