RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 CAMK2BQ13554 666 aa15.31■□□□□ 0.04
LRFN3-201ENST00000246529 ALKAL2Q6UX46 152 aa15.31■□□□□ 0.04
LRFN3-201ENST00000246529 RPS19BP1Q86WX3 136 aaKnown RBP15.31■□□□□ 0.04
LRFN3-201ENST00000246529 OR2Y1Q8NGV0 311 aa15.31■□□□□ 0.04
LRFN3-201ENST00000246529 ZNF837Q96EG3 531 aaPredicted RBP15.31■□□□□ 0.04
LRFN3-201ENST00000246529 LYZL4Q96KX0 146 aa15.31■□□□□ 0.04
LRFN3-201ENST00000246529 C1orf147Q96MC9 270 aaPredicted RBP15.31■□□□□ 0.04
LRFN3-201ENST00000246529 IFT46Q9NQC8 304 aa15.31■□□□□ 0.04
LRFN3-201ENST00000246529 TRAV14DV4A0A0A6YYC5 116 aa15.31■□□□□ 0.04
LRFN3-201ENST00000246529 LOC102725191A0A1B0GVB3 256 aa15.31■□□□□ 0.04
LRFN3-201ENST00000246529 POM121CA8CG34 1229 aa15.31■□□□□ 0.04
LRFN3-201ENST00000246529 DISC1C4P0D8 188 aa15.31■□□□□ 0.04
LRFN3-201ENST00000246529 LAMTOR5O43504 91 aa15.31■□□□□ 0.04
LRFN3-201ENST00000246529 TLX3O43711 291 aaPredicted RBP15.31■□□□□ 0.04
LRFN3-201ENST00000246529 HLA-AP01891 365 aaKnown RBP15.31■□□□□ 0.04
LRFN3-201ENST00000246529 PMP2P02689 132 aa15.31■□□□□ 0.04
LRFN3-201ENST00000246529 CD63P08962 238 aa15.31■□□□□ 0.04
LRFN3-201ENST00000246529 MC2RQ01718 297 aa15.31■□□□□ 0.04
LRFN3-201ENST00000246529 NHLRC3Q5JS37 347 aa15.31■□□□□ 0.04
LRFN3-201ENST00000246529 PLAC9Q5JTB6 97 aa15.31■□□□□ 0.04
LRFN3-201ENST00000246529 PAQR8Q8TEZ7 354 aa15.31■□□□□ 0.04
LRFN3-201ENST00000246529 RBM24Q9BX46 236 aaKnown RBP15.31■□□□□ 0.04
LRFN3-201ENST00000246529 C1QTNF6Q9BXI9 259 aa15.31■□□□□ 0.04
LRFN3-201ENST00000246529 HPF1Q9NWY4 346 aa15.31■□□□□ 0.04
LRFN3-201ENST00000246529 SLC39A1Q9NY26 324 aa15.31■□□□□ 0.04
LRFN3-201ENST00000246529 KCNN3Q9UGI6 736 aa15.31■□□□□ 0.04
LRFN3-201ENST00000246529 CYC1P08574 325 aa15.3■□□□□ 0.04
LRFN3-201ENST00000246529 SLC6A9P48067 706 aa15.3■□□□□ 0.04
LRFN3-201ENST00000246529 DSCR4P56555 118 aaPredicted RBP15.3■□□□□ 0.04
LRFN3-201ENST00000246529 ENDOGQ14249 297 aaKnown RBP15.3■□□□□ 0.04
LRFN3-201ENST00000246529 M1APQ8TC57 530 aa15.3■□□□□ 0.04
LRFN3-201ENST00000246529 TMEM41AQ96HV5 264 aa15.3■□□□□ 0.04
LRFN3-201ENST00000246529 CST11Q9H112 138 aa15.3■□□□□ 0.04
LRFN3-201ENST00000246529 A0A087WZY1 265 aa15.3■□□□□ 0.04
LRFN3-201ENST00000246529 A0A0J9YW62 118 aa15.3■□□□□ 0.04
LRFN3-201ENST00000246529 PMS2P1A4D2B8 440 aa15.3■□□□□ 0.04
LRFN3-201ENST00000246529 OR2AT4A6NND4 320 aa15.3■□□□□ 0.04
LRFN3-201ENST00000246529 NPIPA2E9PIF3 369 aa15.3■□□□□ 0.04
LRFN3-201ENST00000246529 NPIPA3F8WFD2 350 aa15.3■□□□□ 0.04
LRFN3-201ENST00000246529 YKT6O15498 198 aa15.3■□□□□ 0.04
LRFN3-201ENST00000246529 ERCC1P07992 297 aaPredicted RBP15.3■□□□□ 0.04
LRFN3-201ENST00000246529 DBHP09172 617 aa15.3■□□□□ 0.04
LRFN3-201ENST00000246529 CAPZA1P52907 286 aa15.3■□□□□ 0.04
LRFN3-201ENST00000246529 PGAM5Q96HS1 289 aa15.3■□□□□ 0.04
LRFN3-201ENST00000246529 GPER1Q99527 375 aa15.3■□□□□ 0.04
LRFN3-201ENST00000246529 SRXN1Q9BYN0 137 aa15.3■□□□□ 0.04
LRFN3-201ENST00000246529 SH2D2AQ9NP31 389 aa15.3■□□□□ 0.04
LRFN3-201ENST00000246529 NOP16Q9Y3C1 178 aaKnown RBP15.3■□□□□ 0.04
LRFN3-201ENST00000246529 RTTNQ86VV8 2226 aa15.29■□□□□ 0.04
LRFN3-201ENST00000246529 OR6C65A6NJZ3 312 aa15.29■□□□□ 0.04
LRFN3-201ENST00000246529 HMSDA8MTL9 139 aa15.29■□□□□ 0.04
LRFN3-201ENST00000246529 CDC14BO60729 498 aa15.29■□□□□ 0.04
LRFN3-201ENST00000246529 PDGFAP04085 211 aa15.29■□□□□ 0.04
LRFN3-201ENST00000246529 C4BPBP20851 252 aa15.29■□□□□ 0.04
LRFN3-201ENST00000246529 MSR1P21757 451 aa15.29■□□□□ 0.04
LRFN3-201ENST00000246529 CD34P28906 385 aa15.29■□□□□ 0.04
LRFN3-201ENST00000246529 PPP1R1AQ13522 171 aa15.29■□□□□ 0.04
LRFN3-201ENST00000246529 MEF2DQ14814 521 aa15.29■□□□□ 0.04
LRFN3-201ENST00000246529 MPPED2Q15777 294 aa15.29■□□□□ 0.04
LRFN3-201ENST00000246529 RHOUQ7L0Q8 258 aa15.29■□□□□ 0.04
LRFN3-201ENST00000246529 CCDC28AQ8IWP9 274 aa15.29■□□□□ 0.04
LRFN3-201ENST00000246529 ADAD2Q8NCV1 583 aaKnown RBP15.29■□□□□ 0.04
LRFN3-201ENST00000246529 OR9K2Q8NGE7 335 aa15.29■□□□□ 0.04
LRFN3-201ENST00000246529 OR14K1Q8NGZ2 314 aa15.29■□□□□ 0.04
LRFN3-201ENST00000246529 ANGPTL6Q8NI99 470 aa15.29■□□□□ 0.04
LRFN3-201ENST00000246529 SEC22AQ96IW7 307 aa15.29■□□□□ 0.04
LRFN3-201ENST00000246529 ZNF107Q9UII5 783 aaPredicted RBP15.29■□□□□ 0.04
LRFN3-201ENST00000246529 RAD51DO75771 328 aa15.28■□□□□ 0.04
LRFN3-201ENST00000246529 SCO1O75880 301 aa15.28■□□□□ 0.04
LRFN3-201ENST00000246529 CASRP41180 1078 aa15.28■□□□□ 0.04
LRFN3-201ENST00000246529 FOLR3P41439 243 aa15.28■□□□□ 0.04
LRFN3-201ENST00000246529 MLF1P58340 268 aa15.28■□□□□ 0.04
LRFN3-201ENST00000246529 GRB2P62993 217 aaKnown RBP15.28■□□□□ 0.04
LRFN3-201ENST00000246529 RSPO1Q2MKA7 263 aaPredicted RBP15.28■□□□□ 0.04
LRFN3-201ENST00000246529 DOK3Q7L591 496 aa15.28■□□□□ 0.04
LRFN3-201ENST00000246529 C1QL2Q7Z5L3 287 aa15.28■□□□□ 0.04
LRFN3-201ENST00000246529 ZIC4Q8N9L1 334 aa15.28■□□□□ 0.04
LRFN3-201ENST00000246529 COQ8AQ8NI60 647 aa15.28■□□□□ 0.04
LRFN3-201ENST00000246529 TMEM54Q969K7 222 aa15.28■□□□□ 0.04
LRFN3-201ENST00000246529 NABP1Q96AH0 204 aa15.28■□□□□ 0.04
LRFN3-201ENST00000246529 PRRT1Q99946 306 aa15.28■□□□□ 0.04
LRFN3-201ENST00000246529 FN3KRPQ9HA64 309 aa15.28■□□□□ 0.04
LRFN3-201ENST00000246529 TPD52L2O43399 206 aaKnown RBP15.28■□□□□ 0.04
LRFN3-201ENST00000246529 RP2O75695 350 aa15.28■□□□□ 0.04
LRFN3-201ENST00000246529 CRTAPO75718 401 aaPredicted RBP15.28■□□□□ 0.04
LRFN3-201ENST00000246529 STK17BO94768 372 aa15.28■□□□□ 0.04
LRFN3-201ENST00000246529 RRASP10301 218 aa15.28■□□□□ 0.04
LRFN3-201ENST00000246529 CCL1P22362 96 aa15.28■□□□□ 0.04
LRFN3-201ENST00000246529 FKBP2P26885 142 aaKnown RBP15.28■□□□□ 0.04
LRFN3-201ENST00000246529 OTX2P32243 289 aa15.28■□□□□ 0.04
LRFN3-201ENST00000246529 GUCA1AP43080 201 aaPredicted RBP15.28■□□□□ 0.04
LRFN3-201ENST00000246529 AANATQ16613 207 aa15.28■□□□□ 0.04
LRFN3-201ENST00000246529 LRRC37A5PQ49AS3 106 aa15.28■□□□□ 0.04
LRFN3-201ENST00000246529 CCDC157Q569K6 752 aa15.28■□□□□ 0.04
LRFN3-201ENST00000246529 PGAP1Q75T13 922 aa15.28■□□□□ 0.04
LRFN3-201ENST00000246529 YRDCQ86U90 279 aaKnown RBP15.28■□□□□ 0.04
LRFN3-201ENST00000246529 TMEM123Q8N131 208 aa15.28■□□□□ 0.04
LRFN3-201ENST00000246529 ST8SIA4Q92187 359 aa15.28■□□□□ 0.04
LRFN3-201ENST00000246529 CXorf58Q96LI9 332 aa15.28■□□□□ 0.04
LRFN3-201ENST00000246529 IER2Q9BTL4 223 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms