RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 ASB13Q8WXK3 278 aa8.34□□□□□ -1.07
COL21A1-201ENST00000244728 GNRHR2Q96P88 292 aa8.34□□□□□ -1.07
COL21A1-201ENST00000244728 CMSS1Q9BQ75 279 aaKnown RBP8.34□□□□□ -1.07
COL21A1-201ENST00000244728 ADAT1Q9BUB4 502 aaKnown RBP8.34□□□□□ -1.07
COL21A1-201ENST00000244728 TMPRSS13Q9BYE2 586 aa8.34□□□□□ -1.07
COL21A1-201ENST00000244728 VN1R1Q9GZP7 353 aa8.34□□□□□ -1.07
COL21A1-201ENST00000244728 FAM212BQ9NTI7 297 aaPredicted RBP8.34□□□□□ -1.07
COL21A1-201ENST00000244728 MRPS28Q9Y2Q9 187 aaKnown RBP8.34□□□□□ -1.07
COL21A1-201ENST00000244728 TRAV8-7A0A075B6U6 113 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 IGHV1OR21-1A0A087WYE8 117 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 ABHD16AO95870 558 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 EPPINO95925 133 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 WNT11O96014 354 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 BTCP35070 178 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 SNRPEP62304 92 aaKnown RBP8.33□□□□□ -1.08
COL21A1-201ENST00000244728 EGR3Q06889 387 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 PPP1R1AQ13522 171 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 IL10RAQ13651 578 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 ZNF660Q6AZW8 331 aaPredicted RBP8.33□□□□□ -1.08
COL21A1-201ENST00000244728 UQCC3Q6UW78 93 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 STPG2Q8N412 459 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 NKAIN3Q8N8D7 197 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 TMEM229BQ8NBD8 167 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 OR52H1Q8NGJ2 320 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 GPBAR1Q8TDU6 330 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 ZNF681Q96N22 645 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 GABRG3Q99928 467 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 CFHR5Q9BXR6 569 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 UNKLQ9H9P5 680 aaKnown RBP8.33□□□□□ -1.08
COL21A1-201ENST00000244728 SLC22A11Q9NSA0 550 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 NOTCH3Q9UM47 2321 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 TMEM218A2RU14 115 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 FTCDNL1E5RQL4 147 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 CD46P15529 392 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 FOXK1P85037 733 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 DEFA6Q01524 100 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 PPA1Q15181 289 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 C1QL3Q5VWW1 255 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 MRGPREQ86SM8 312 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 HSD17B11Q8NBQ5 300 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 OR51E1Q8TCB6 317 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 DNAJB12Q9NXW2 375 aaKnown RBP8.33□□□□□ -1.08
COL21A1-201ENST00000244728 MRM2Q9UI43 246 aaKnown RBP8.33□□□□□ -1.08
COL21A1-201ENST00000244728 ZNF230Q9UIE0 474 aaPredicted RBP8.33□□□□□ -1.08
COL21A1-201ENST00000244728 CXCL13O43927 109 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 GLULP15104 373 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 GNB3P16520 340 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 ALOX5APP20292 161 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 ABCD3P28288 659 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 MEOX2P50222 304 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 NANOS3P60323 173 aaKnown RBP8.33□□□□□ -1.08
COL21A1-201ENST00000244728 TGFBR3Q03167 851 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 EIF2S3LQ2VIR3 472 aaKnown RBP8.33□□□□□ -1.08
COL21A1-201ENST00000244728 Q6ZRG5 221 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 MISPQ8IVT2 679 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 MKXQ8IYA7 352 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 OR14K1Q8NGZ2 314 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 NT5CQ8TCD5 201 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 SLC25A38Q96DW6 304 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 RRNAD1Q96FB5 475 aaKnown RBP8.33□□□□□ -1.08
COL21A1-201ENST00000244728 C4orf45Q96LM5 186 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 SLC19A3Q9BZV2 496 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 DEFB127Q9H1M4 99 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 RHOFQ9HBH0 211 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 EXOSC3Q9NQT5 275 aaKnown RBP8.33□□□□□ -1.08
COL21A1-201ENST00000244728 NXT1Q9UKK6 140 aaKnown RBP8.33□□□□□ -1.08
COL21A1-201ENST00000244728 A0A096LPE4 126 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 A0A1W2PPZ6 126 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 C5orf67F2Z3F1 127 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 SDCBPO00560 298 aaPredicted RBP8.33□□□□□ -1.08
COL21A1-201ENST00000244728 NKX6-1P78426 367 aaPredicted RBP8.33□□□□□ -1.08
COL21A1-201ENST00000244728 GLIPR1L1Q6UWM5 242 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 OR5M8Q8NGP6 311 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 FAM213BQ8TBF2 198 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 WWTR1Q9GZV5 400 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 FRRS1LQ9P0K9 344 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 DUSP13Q9UII6 198 aa8.33□□□□□ -1.08
COL21A1-201ENST00000244728 CREBBPQ92793 2442 aa8.32□□□□□ -1.08
COL21A1-201ENST00000244728 ZNF646O15015 1829 aaPredicted RBP8.32□□□□□ -1.08
COL21A1-201ENST00000244728 TMEM272A0A1B0GTI8 110 aa8.32□□□□□ -1.08
COL21A1-201ENST00000244728 NKX2-2O95096 273 aa8.32□□□□□ -1.08
COL21A1-201ENST00000244728 CHATP28329 748 aa8.32□□□□□ -1.08
COL21A1-201ENST00000244728 EFNB2P52799 333 aa8.32□□□□□ -1.08
COL21A1-201ENST00000244728 SSBP1Q04837 148 aaKnown RBP8.32□□□□□ -1.08
COL21A1-201ENST00000244728 FOXF1Q12946 379 aa8.32□□□□□ -1.08
COL21A1-201ENST00000244728 SLC16A13Q7RTY0 426 aa8.32□□□□□ -1.08
COL21A1-201ENST00000244728 NPEPL1Q8NDH3 523 aa8.32□□□□□ -1.08
COL21A1-201ENST00000244728 TMEM52Q8NDY8 209 aa8.32□□□□□ -1.08
COL21A1-201ENST00000244728 CMBLQ96DG6 245 aa8.32□□□□□ -1.08
COL21A1-201ENST00000244728 TWSG1Q9GZX9 223 aa8.32□□□□□ -1.08
COL21A1-201ENST00000244728 OBP2BQ9NPH6 170 aa8.32□□□□□ -1.08
COL21A1-201ENST00000244728 SHISA7A6NL88 538 aa8.32□□□□□ -1.08
COL21A1-201ENST00000244728 NME2P1O60361 137 aa8.32□□□□□ -1.08
COL21A1-201ENST00000244728 IFNA4P05014 189 aa8.32□□□□□ -1.08
COL21A1-201ENST00000244728 S100A8P05109 93 aa8.32□□□□□ -1.08
COL21A1-201ENST00000244728 CDAP32320 146 aa8.32□□□□□ -1.08
COL21A1-201ENST00000244728 RAB5CP51148 216 aa8.32□□□□□ -1.08
COL21A1-201ENST00000244728 H2BFSP57053 126 aa8.32□□□□□ -1.08
COL21A1-201ENST00000244728 PRICKLE4Q2TBC4 344 aa8.32□□□□□ -1.08
COL21A1-201ENST00000244728 ACTBL2Q562R1 376 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms