RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 DEFB108AA8MXU0 73 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 PIGPP57054 158 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 FOXK1P85037 733 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 ZNF787Q6DD87 383 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 OR10AC1Q8NH08 325 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 OR6C1Q96RD1 312 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 TERTO14746 1132 aaKnown RBP6.81□□□□□ -1.32
RIF1-201ENST00000243326 USF1P22415 310 aaPredicted RBP6.81□□□□□ -1.32
RIF1-201ENST00000243326 GABREP78334 506 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 GUK1Q16774 197 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 RBMS3Q6XE24 437 aaKnown RBP6.81□□□□□ -1.32
RIF1-201ENST00000243326 ADAD2Q8NCV1 583 aaKnown RBP6.81□□□□□ -1.32
RIF1-201ENST00000243326 GPR84Q9NQS5 396 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 MRPS17Q9Y2R5 130 aaKnown RBP6.81□□□□□ -1.32
RIF1-201ENST00000243326 ZNF462Q96JM2 2506 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 GFYI3L273 518 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 LYG2Q86SG7 212 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 EPHX3Q9H6B9 360 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 V9GYH0 126 aa6.81□□□□□ -1.32
RIF1-201ENST00000243326 MT-ND4LP03901 98 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 FOLR3P41439 243 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 TAS2R30P59541 319 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 C9orf62Q8N4C0 152 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 BCORP1Q8N888 145 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 FAM3CQ92520 227 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 KTI12Q96EK9 354 aaPredicted RBP6.8□□□□□ -1.32
RIF1-201ENST00000243326 TRAPPC1Q9Y5R8 145 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 CDC34P49427 236 aaPredicted RBP6.8□□□□□ -1.32
RIF1-201ENST00000243326 FAM26DQ5JW98 314 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 VN1R2Q8NFZ6 395 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 GOT1L1Q8NHS2 421 aaPredicted RBP6.8□□□□□ -1.32
RIF1-201ENST00000243326 SLC25A21Q9BQT8 299 aaPredicted RBP6.8□□□□□ -1.32
RIF1-201ENST00000243326 CDC14BO60729 498 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 NKX2-1P43699 371 aaPredicted RBP6.8□□□□□ -1.32
RIF1-201ENST00000243326 RABIFP47224 123 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 RAB32Q13637 225 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 PRSS41Q7RTY9 318 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 CA10Q9NS85 328 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 ZNF25P17030 456 aaPredicted RBP6.8□□□□□ -1.32
RIF1-201ENST00000243326 HLA-BQ31612 363 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 TMEM65Q6PI78 240 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 SFTPA1Q8IWL2 248 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 LHX4Q969G2 390 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 VN1R1Q9GZP7 353 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 ZMAT5Q9UDW3 170 aaKnown RBP6.8□□□□□ -1.32
RIF1-201ENST00000243326 A3GALT2U3KPV4 340 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 ACAA1P09110 424 aaPredicted RBP6.8□□□□□ -1.32
RIF1-201ENST00000243326 CD96P40200 585 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 B4GALNT1Q00973 533 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 NKAIN1Q4KMZ8 207 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 C19orf47Q8N9M1 422 aaKnown RBP6.8□□□□□ -1.32
RIF1-201ENST00000243326 SFXN1Q9H9B4 322 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 GAR1Q9NY12 217 aaKnown RBP6.8□□□□□ -1.32
RIF1-201ENST00000243326 POMT1Q9Y6A1 747 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 DNAJB6O75190 326 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 HBE1P02100 147 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 FGF7P21781 194 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 ZNF121P58317 390 aaPredicted RBP6.8□□□□□ -1.32
RIF1-201ENST00000243326 ABHD17BQ5VST6 288 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 KPTNQ9Y664 436 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 A0A1B0GUH1 482 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 SEC14L6B5MCN3 397 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 PDGFBP01127 241 aaPredicted RBP6.8□□□□□ -1.32
RIF1-201ENST00000243326 CCL2P13500 99 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 IRF3Q14653 427 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 PLPP6Q8IY26 295 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 FBXL6Q8N531 539 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 RHBDD1Q8TEB9 315 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 HBQ1P09105 142 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 LGALSLQ3ZCW2 172 aaPredicted RBP6.8□□□□□ -1.32
RIF1-201ENST00000243326 CD300LGQ6UXG3 332 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 FGF13Q92913 245 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 SIGLEC11Q96RL6 698 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 NCOR2Q9Y618 2525 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 MORN1Q5T089 497 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 TMEM164Q5U3C3 297 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 KIAA0895LQ68EN5 471 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 ARL6IP6Q8N6S5 226 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 ANKRD53Q8N9V6 530 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 GPR32P1Q8NGA4 272 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 LCORQ96JN0 433 aaPredicted RBP6.8□□□□□ -1.32
RIF1-201ENST00000243326 NPAS1Q99742 590 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 ZDHHC11Q9H8X9 412 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 PSENENQ9NZ42 101 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 MRPL33O75394 65 aaKnown RBP6.8□□□□□ -1.32
RIF1-201ENST00000243326 ABHD16AO95870 558 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 AGBL4Q5VU57 503 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 CYHR1Q6ZMK1 362 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 JAM3Q9BX67 310 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 LPAR5Q9H1C0 372 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 TMEM272A0A1B0GTI8 110 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 C5orf49A4QMS7 147 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 MBTPS2O43462 519 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 CTSLP07711 333 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 IHHQ14623 411 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 CLLU1Q5K131 121 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 FGF22Q9HCT0 170 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 B4GALT7Q9UBV7 327 aa6.8□□□□□ -1.32
RIF1-201ENST00000243326 SLCO2B1O94956 709 aa6.79□□□□□ -1.32
RIF1-201ENST00000243326 CER1O95813 267 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms