RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 SFXN2Q96NB2 322 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 ZNF385AQ96PM9 386 aaKnown RBP7.62□□□□□ -1.19
VPS4B-201ENST00000238497 OR51J1Q9H342 316 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 BANF2Q9H503 90 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 ZNF703Q9H7S9 590 aaPredicted RBP7.62□□□□□ -1.19
VPS4B-201ENST00000238497 ZDHHC11Q9H8X9 412 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 IGLV1-36A0A0B4J1U3 117 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 A0A1B0GVI7 797 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 TMEM235A6NFC5 223 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 CLDN20P56880 219 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 SNTB1Q13884 538 aaKnown RBP7.62□□□□□ -1.19
VPS4B-201ENST00000238497 CDSNQ15517 529 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 GLT8D1Q68CQ7 371 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 TIGD3Q6B0B8 471 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 MCEMP1Q8IX19 187 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 ZNF441Q8N8Z8 693 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 ITPKCQ96DU7 683 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 SLC25A38Q96DW6 304 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 GPX7Q96SL4 187 aaPredicted RBP7.62□□□□□ -1.19
VPS4B-201ENST00000238497 OR51B6Q9H340 312 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 C1orf198Q9H425 327 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 KCNJ16Q9NPI9 418 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 PLEK2Q9NYT0 353 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 ZNF835Q9Y2P0 537 aa7.62□□□□□ -1.19
VPS4B-201ENST00000238497 OR2M5A3KFT3 312 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 LRRC3CA6NJW4 275 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 HPXP02790 462 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 BMP5P22003 454 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 LRRC37A5PQ49AS3 106 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 SLC22A6Q4U2R8 563 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 MEX3BQ6ZN04 569 aaKnown RBP7.61□□□□□ -1.19
VPS4B-201ENST00000238497 OR4S1Q8NGB4 309 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 OR4D10Q8NGI6 311 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 OR10K1Q8NGX5 313 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 MFSD8Q8NHS3 518 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 POC1BQ8TC44 478 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 STK35Q8TDR2 534 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 TNFAIP8L1Q8WVP5 186 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 JAM3Q9BX67 310 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 PRRG4Q9BZD6 226 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 NOX3Q9HBY0 568 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 SPRR3Q9UBC9 169 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 MGAT4AQ9UM21 535 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 A6NIZ1 184 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 CXCL13O43927 109 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 SC5DO75845 299 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 GLSO94925 669 aaPredicted RBP7.61□□□□□ -1.19
VPS4B-201ENST00000238497 MPIG6BO95866 241 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 HTR2CP28335 458 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 RAD52P43351 418 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 RAP1BP61224 184 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 RAP1AP62834 184 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 SLC36A2Q495M3 483 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 LIN54Q6MZP7 749 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 CFAP77Q6ZQR2 320 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 MISPQ8IVT2 679 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 ASCC1Q8N9N2 400 aaKnown RBP7.61□□□□□ -1.19
VPS4B-201ENST00000238497 OR2M3Q8NG83 312 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 OR2T35Q8NGX2 323 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 ZNF431Q8TF32 576 aaPredicted RBP7.61□□□□□ -1.19
VPS4B-201ENST00000238497 ASB10Q8WXI3 467 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 PGAM5Q96HS1 289 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 ALKBH3Q96Q83 286 aaPredicted RBP7.61□□□□□ -1.19
VPS4B-201ENST00000238497 TRIB1Q96RU8 372 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 METTL17Q9H7H0 456 aaPredicted RBP7.61□□□□□ -1.19
VPS4B-201ENST00000238497 HRASLSQ9HDD0 168 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 STEAP1Q9UHE8 339 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 GDF2Q9UK05 429 aaPredicted RBP7.61□□□□□ -1.19
VPS4B-201ENST00000238497 ITGB1BP2Q9UKP3 347 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 FREM1Q5H8C1 2179 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 PRR14LQ5THK1 2151 aa7.61□□□□□ -1.19
VPS4B-201ENST00000238497 GPR171O14626 319 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 ABHD16AO95870 558 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 HLA-DQB1P01920 261 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 DBHP09172 617 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 SLC6A1P30531 599 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 PRSS3P35030 304 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 CSNK1A1P48729 337 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 SNU13P55769 128 aaKnown RBP7.6□□□□□ -1.19
VPS4B-201ENST00000238497 EGR3Q06889 387 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 MFSD13AQ14CX5 517 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 ZNF519Q8TB69 540 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 RNF128Q8TEB7 428 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 ASB5Q8WWX0 329 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 DEDD2Q8WXF8 326 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 HGDQ93099 445 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 MCHR2Q969V1 340 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 ZNF837Q96EG3 531 aaPredicted RBP7.6□□□□□ -1.19
VPS4B-201ENST00000238497 ING4Q9UNL4 249 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 B3GALT5Q9Y2C3 310 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 FTCDNL1E5RQL4 147 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 C19orf84I3L1E1 186 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 NPIPB7O75200 414 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 CD3DP04234 171 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 ALDOBP05062 364 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 CD53P19397 219 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 CHRNB4P30926 498 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 SELENOPP49908 381 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 ZNF81P51508 661 aa7.6□□□□□ -1.19
VPS4B-201ENST00000238497 CCR9P51686 369 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms