RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 BCDIN3DQ7Z5W3 292 aaKnown RBP9.62□□□□□ -0.87
SF3B6-201ENST00000233468 ZNF786Q8N393 782 aa9.62□□□□□ -0.87
SF3B6-201ENST00000233468 OR8G5Q8NG78 346 aa9.62□□□□□ -0.87
SF3B6-201ENST00000233468 RHOXF1Q8NHV9 184 aa9.62□□□□□ -0.87
SF3B6-201ENST00000233468 CYGBQ8WWM9 190 aa9.62□□□□□ -0.87
SF3B6-201ENST00000233468 ELMOD3Q96FG2 381 aa9.62□□□□□ -0.87
SF3B6-201ENST00000233468 PGAM5Q96HS1 289 aa9.62□□□□□ -0.87
SF3B6-201ENST00000233468 SAP30LQ9HAJ7 183 aa9.62□□□□□ -0.87
SF3B6-201ENST00000233468 RNPEPL1Q9HAU8 725 aa9.62□□□□□ -0.87
SF3B6-201ENST00000233468 TMEM100Q9NV29 134 aa9.62□□□□□ -0.87
SF3B6-201ENST00000233468 RPL36Q9Y3U8 105 aaKnown RBP9.62□□□□□ -0.87
SF3B6-201ENST00000233468 N6AMT1Q9Y5N5 214 aa9.62□□□□□ -0.87
SF3B6-201ENST00000233468 HSPE1-MOB4S4R3N1 261 aa9.62□□□□□ -0.87
SF3B6-201ENST00000233468 ABCA1O95477 2261 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 TMEM269A0A1B0GVZ9 245 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 IRGMA1A4Y4 181 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 IQCF6A8MYZ5 107 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 H0YAE9 185 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 SPRY3O43610 288 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 ENTPD6O75354 484 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 SULT1C4O75897 302 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 TACSTD2P09758 323 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 PSKH1P11801 424 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 ACHEP22303 614 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 TMEM33P57088 247 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 ZNF121P58317 390 aaPredicted RBP9.61□□□□□ -0.87
SF3B6-201ENST00000233468 PSMA6P60900 246 aaKnown RBP9.61□□□□□ -0.87
SF3B6-201ENST00000233468 IL5RAQ01344 420 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 SLC3A1Q07837 685 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 CDK5R2Q13319 367 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 HLXQ14774 488 aaPredicted RBP9.61□□□□□ -0.87
SF3B6-201ENST00000233468 KLHL22Q53GT1 634 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 OR2T2Q6IF00 324 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 LRRN1Q6UXK5 716 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 PLEKHG7Q6ZR37 379 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 DNM1P46Q6ZS02 220 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 FAM57BQ71RH2 274 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 FAM220AQ7Z4H9 259 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 KCTD20Q7Z5Y7 419 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 NAA40Q86UY6 237 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 KLBQ86Z14 1044 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 EGFL6Q8IUX8 553 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 ENTHD1Q8IYW4 607 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 ZCCHC24Q8N2G6 241 aaKnown RBP9.61□□□□□ -0.87
SF3B6-201ENST00000233468 ZNF525Q8N782 197 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 MAPK1IP1LQ8NDC0 245 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 OR10H4Q8NGA5 316 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 RNFT2Q96EX2 444 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 OR8B4Q96RC9 309 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 AMELYQ99218 206 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 MOB1AQ9H8S9 216 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 CHODLQ9H9P2 273 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 MRPL15Q9P015 296 aaKnown RBP9.61□□□□□ -0.87
SF3B6-201ENST00000233468 LRP12Q9Y561 859 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 CUBNO60494 3623 aa9.61□□□□□ -0.87
SF3B6-201ENST00000233468 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.6□□□□□ -0.87
SF3B6-201ENST00000233468 ANKRD30BLA7E2S9 258 aa9.6□□□□□ -0.87
SF3B6-201ENST00000233468 CD300LBA8K4G0 201 aa9.6□□□□□ -0.87
SF3B6-201ENST00000233468 H0YJX3 145 aa9.6□□□□□ -0.87
SF3B6-201ENST00000233468 IFNL4K9M1U5 179 aa9.6□□□□□ -0.87
SF3B6-201ENST00000233468 FADS2O95864 444 aaKnown RBP9.6□□□□□ -0.87
SF3B6-201ENST00000233468 IGHV1-46P01743 117 aa9.6□□□□□ -0.87
SF3B6-201ENST00000233468 CD55P08174 381 aa9.6□□□□□ -0.87
SF3B6-201ENST00000233468 SLC2A1P11166 492 aa9.6□□□□□ -0.87
SF3B6-201ENST00000233468 CAPGP40121 348 aa9.6□□□□□ -0.87
SF3B6-201ENST00000233468 SRP9P49458 86 aaKnown RBP9.6□□□□□ -0.87
SF3B6-201ENST00000233468 HCCSP53701 268 aa9.6□□□□□ -0.87
SF3B6-201ENST00000233468 CCL8P80075 99 aa9.6□□□□□ -0.87
SF3B6-201ENST00000233468 TNFAIP6P98066 277 aaPredicted RBP9.6□□□□□ -0.87
SF3B6-201ENST00000233468 KRTAP1-1Q07627 177 aa9.6□□□□□ -0.87
SF3B6-201ENST00000233468 RAB40BQ12829 278 aa9.6□□□□□ -0.87
SF3B6-201ENST00000233468 TNK1Q13470 666 aa9.6□□□□□ -0.87
SF3B6-201ENST00000233468 TSTQ16762 297 aaKnown RBP9.6□□□□□ -0.87
SF3B6-201ENST00000233468 HFEQ30201 348 aa9.6□□□□□ -0.87
SF3B6-201ENST00000233468 SNAI3Q3KNW1 292 aa9.6□□□□□ -0.87
SF3B6-201ENST00000233468 GLYATL3Q5SZD4 288 aa9.6□□□□□ -0.87
SF3B6-201ENST00000233468 SPERTQ8NA61 448 aa9.6□□□□□ -0.87
SF3B6-201ENST00000233468 CSNK2A3Q8NEV1 391 aa9.6□□□□□ -0.87
SF3B6-201ENST00000233468 OR2Z1Q8NG97 314 aa9.6□□□□□ -0.87
SF3B6-201ENST00000233468 C10orf105Q8TEF2 133 aa9.6□□□□□ -0.87
SF3B6-201ENST00000233468 SPSB4Q96A44 273 aa9.6□□□□□ -0.87
SF3B6-201ENST00000233468 TIMD4Q96H15 378 aa9.6□□□□□ -0.87
SF3B6-201ENST00000233468 REEP6Q96HR9 211 aa9.6□□□□□ -0.87
SF3B6-201ENST00000233468 ADI1Q9BV57 179 aa9.6□□□□□ -0.87
SF3B6-201ENST00000233468 REG4Q9BYZ8 158 aa9.6□□□□□ -0.87
SF3B6-201ENST00000233468 POFUT1Q9H488 388 aa9.6□□□□□ -0.87
SF3B6-201ENST00000233468 MSL2Q9HCI7 577 aa9.6□□□□□ -0.87
SF3B6-201ENST00000233468 BRD7Q9NPI1 651 aa9.6□□□□□ -0.87
SF3B6-201ENST00000233468 INPP5EQ9NRR6 644 aa9.6□□□□□ -0.87
SF3B6-201ENST00000233468 IL19Q9UHD0 177 aa9.6□□□□□ -0.87
SF3B6-201ENST00000233468 KLHDC2Q9Y2U9 406 aa9.6□□□□□ -0.87
SF3B6-201ENST00000233468 ANK3Q12955 4377 aaKnown RBP9.59□□□□□ -0.87
SF3B6-201ENST00000233468 PLCE1Q9P212 2302 aa9.59□□□□□ -0.87
SF3B6-201ENST00000233468 STAB1Q9NY15 2570 aa9.59□□□□□ -0.87
SF3B6-201ENST00000233468 IGHV1-69-2A0A0G2JMI3 117 aa9.59□□□□□ -0.87
SF3B6-201ENST00000233468 A0A1W2PQL4 384 aaPredicted RBP9.59□□□□□ -0.87
SF3B6-201ENST00000233468 DAPL1A0PJW8 107 aa9.59□□□□□ -0.87
SF3B6-201ENST00000233468 METTL15A6NJ78 407 aa9.59□□□□□ -0.87
SF3B6-201ENST00000233468 ZSCAN5BA6NJL1 495 aa9.59□□□□□ -0.87
SF3B6-201ENST00000233468 GMDSO60547 372 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms