RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 C1QTNF9BB2RNN3 333 aa7.48□□□□□ -1.21
SPARC-201ENST00000231061 RNASEK-C17orf49H0YIS7 233 aa7.48□□□□□ -1.21
SPARC-201ENST00000231061 C1orf105O95561 183 aa7.48□□□□□ -1.21
SPARC-201ENST00000231061 RAB36O95755 333 aa7.48□□□□□ -1.21
SPARC-201ENST00000231061 RPL3P39023 403 aaKnown RBP7.48□□□□□ -1.21
SPARC-201ENST00000231061 DUSP3P51452 185 aaPredicted RBP7.48□□□□□ -1.21
SPARC-201ENST00000231061 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.48□□□□□ -1.21
SPARC-201ENST00000231061 HSPB3Q12988 150 aa7.48□□□□□ -1.21
SPARC-201ENST00000231061 PDE7AQ13946 482 aa7.48□□□□□ -1.21
SPARC-201ENST00000231061 MEF2DQ14814 521 aa7.48□□□□□ -1.21
SPARC-201ENST00000231061 TEAD2Q15562 447 aa7.48□□□□□ -1.21
SPARC-201ENST00000231061 KHDC3LQ587J8 217 aa7.48□□□□□ -1.21
SPARC-201ENST00000231061 TMEM41BQ5BJD5 291 aa7.48□□□□□ -1.21
SPARC-201ENST00000231061 Q6ZVH6 145 aa7.48□□□□□ -1.21
SPARC-201ENST00000231061 KREMEN2Q8NCW0 462 aa7.48□□□□□ -1.21
SPARC-201ENST00000231061 OR4S1Q8NGB4 309 aa7.48□□□□□ -1.21
SPARC-201ENST00000231061 IRF7Q92985 503 aa7.48□□□□□ -1.21
SPARC-201ENST00000231061 MED28Q9H204 178 aa7.48□□□□□ -1.21
SPARC-201ENST00000231061 SLC6A20Q9NP91 592 aa7.48□□□□□ -1.21
SPARC-201ENST00000231061 DKK4Q9UBT3 224 aa7.48□□□□□ -1.21
SPARC-201ENST00000231061 CUL9Q8IWT3 2517 aa7.48□□□□□ -1.21
SPARC-201ENST00000231061 SPAARA0A1B0GVQ0 90 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 A0A1B0GW55 424 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 WIPF1O43516 503 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 SERPIND1P05546 499 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 CTSLP07711 333 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 DBHP09172 617 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 DUX4L2P0CJ85 424 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 DUX4L3P0CJ86 424 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 DUX4L4P0CJ87 422 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 DUX4L5P0CJ88 424 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 DUX4L6P0CJ89 424 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 DUX4L7P0CJ90 424 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 NPPBP16860 134 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 SOX3P41225 446 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 CCR2P41597 374 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 XCR1P46094 333 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 ERVFC1-1P60608 527 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 NTHL1P78549 312 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 HYAL1Q12794 435 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 FBLN7Q53RD9 439 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 PRICKLE2Q7Z3G6 844 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 PARGQ86W56 976 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 UEVLDQ8IX04 471 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 PTX4Q96A99 478 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 LMLNQ96KR4 655 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 C11orf54Q9H0W9 315 aaPredicted RBP7.47□□□□□ -1.21
SPARC-201ENST00000231061 DPAGT1Q9H3H5 408 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 HRH4Q9H3N8 390 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 DUX4Q9UBX2 424 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 TRBV4-1A0A0J9YWV2 114 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 PPP1R2P9O14990 202 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 ENTPD6O75354 484 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 TSPAN13O95857 204 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 AMBPP02760 352 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 CST2P09228 141 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 EGR1P18146 543 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 FPR2P25090 351 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 GPR1P46091 355 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 MANFP55145 182 aaKnown RBP7.47□□□□□ -1.21
SPARC-201ENST00000231061 WNT4P56705 351 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 PRKCDQ05655 676 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 DOC2BQ14184 412 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 LINC01551Q86U37 167 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 SLC35A4Q96G79 324 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 CLCC1Q96S66 551 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 NAA38Q9BRA0 125 aaKnown RBP7.47□□□□□ -1.21
SPARC-201ENST00000231061 C20orf24Q9BUV8 137 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 RSPO3Q9BXY4 272 aaPredicted RBP7.47□□□□□ -1.21
SPARC-201ENST00000231061 SMIM3Q9BZL3 60 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 NELFAQ9H3P2 528 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 CXorf36Q9H7Y0 433 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 RNF122Q9H9V4 155 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 MYOTQ9UBF9 498 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 VPREB3Q9UKI3 123 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 ASF1AQ9Y294 204 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 MMP24Q9Y5R2 645 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 K7ESF4 209 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 TPST2O60704 377 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 CXCL10P02778 98 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 SLC2A2P11168 524 aaPredicted RBP7.47□□□□□ -1.21
SPARC-201ENST00000231061 RCC1P18754 421 aaPredicted RBP7.47□□□□□ -1.21
SPARC-201ENST00000231061 BAXQ07812 192 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 VAMP3Q15836 100 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 LTC4SQ16873 150 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 PLPPR5Q32ZL2 321 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 TMEM215Q68D42 235 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 FAM71E1Q6IPT2 247 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 YAF2Q8IY57 180 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 RELL2Q8NC24 303 aaPredicted RBP7.47□□□□□ -1.21
SPARC-201ENST00000231061 OR5R1Q8NH85 324 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 OR1S1Q8NH92 325 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 NUDCD2Q8WVJ2 157 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 MESP1Q9BRJ9 268 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 NXF2Q9GZY0 626 aaKnown RBP7.47□□□□□ -1.21
SPARC-201ENST00000231061 IL23AQ9NPF7 189 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 GON4LQ3T8J9 2241 aa7.47□□□□□ -1.21
SPARC-201ENST00000231061 CACNA1GO43497 2377 aa7.46□□□□□ -1.21
SPARC-201ENST00000231061 OR5H15A6NDH6 313 aa7.46□□□□□ -1.21
SPARC-201ENST00000231061 GLOD5A6NK44 160 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms