RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 SERPINA12Q8IW75 414 aa13.8□□□□□ -0.2
SNRPD3-201ENST00000215829 MCFD2Q8NI22 146 aa13.8□□□□□ -0.2
SNRPD3-201ENST00000215829 PRR7Q8TB68 274 aa13.8□□□□□ -0.2
SNRPD3-201ENST00000215829 AKAP1Q92667 903 aaKnown RBP eCLIP13.8□□□□□ -0.22e-10■■■■■ 33.2
SNRPD3-201ENST00000215829 SPSB4Q96A44 273 aa13.8□□□□□ -0.2
SNRPD3-201ENST00000215829 ADAT3Q96EY9 351 aaPredicted RBP13.8□□□□□ -0.2
SNRPD3-201ENST00000215829 CCDC120Q96HB5 630 aa13.8□□□□□ -0.2
SNRPD3-201ENST00000215829 OR10A4Q9H209 315 aa13.8□□□□□ -0.2
SNRPD3-201ENST00000215829 CDH20Q9HBT6 801 aa13.8□□□□□ -0.2
SNRPD3-201ENST00000215829 CKLFQ9UBR5 152 aa13.8□□□□□ -0.2
SNRPD3-201ENST00000215829 PLEKHB1Q9UF11 243 aaPredicted RBP13.8□□□□□ -0.2
SNRPD3-201ENST00000215829 A3GALT2U3KPV4 340 aa13.8□□□□□ -0.2
SNRPD3-201ENST00000215829 ICMTO60725 284 aa13.79□□□□□ -0.2
SNRPD3-201ENST00000215829 NGFP01138 241 aa13.79□□□□□ -0.2
SNRPD3-201ENST00000215829 FSTP19883 344 aa13.79□□□□□ -0.2
SNRPD3-201ENST00000215829 CCKARP32238 428 aa13.79□□□□□ -0.2
SNRPD3-201ENST00000215829 OR10A3P58181 314 aa13.79□□□□□ -0.2
SNRPD3-201ENST00000215829 ZNF92Q03936 586 aa13.79□□□□□ -0.2
SNRPD3-201ENST00000215829 LSAMPQ13449 338 aa13.79□□□□□ -0.2
SNRPD3-201ENST00000215829 PPA1Q15181 289 aa13.79□□□□□ -0.2
SNRPD3-201ENST00000215829 IGFBP7Q16270 282 aa13.79□□□□□ -0.2
SNRPD3-201ENST00000215829 LRRTM1Q86UE6 522 aa13.79□□□□□ -0.2
SNRPD3-201ENST00000215829 BBC3Q96PG8 261 aaPredicted RBP13.79□□□□□ -0.2
SNRPD3-201ENST00000215829 MMP27Q9H306 513 aa13.79□□□□□ -0.2
SNRPD3-201ENST00000215829 ZCCHC4Q9H5U6 513 aa13.79□□□□□ -0.2
SNRPD3-201ENST00000215829 EIF3KQ9UBQ5 218 aaKnown RBP13.79□□□□□ -0.2
SNRPD3-201ENST00000215829 STARD10Q9Y365 291 aa13.79□□□□□ -0.2
SNRPD3-201ENST00000215829 AK6Q9Y3D8 172 aaKnown RBP13.79□□□□□ -0.2
SNRPD3-201ENST00000215829 IGHV1-18A0A0C4DH31 117 aa13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 A0A0G2JK05 382 aa13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 A6NIN4 97 aa13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 DHRS7CA6NNS2 312 aa13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 J3QW42 95 aa13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 CECR9P0C854 216 aa13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 ZNF20P17024 532 aa13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 GNLYP22749 145 aa13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 CFL1P23528 166 aaKnown RBP13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 ASCL1P50553 236 aa13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 MALLQ13021 153 aa13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 C3orf36Q3SXR2 165 aa13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 CROCCP3Q8IVE0 287 aa13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 ZNF101Q8IZC7 436 aa13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 OR5D14Q8NGL3 314 aa13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 LILRB4Q8NHJ6 448 aa13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 C10orf35Q96D05 121 aa13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 SLC30A2Q9BRI3 323 aa13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 TAS2R4Q9NYW5 299 aa13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 ERRFI1Q9UJM3 462 aaPredicted RBP13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 ESPL1Q14674 2120 aa13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 NBASA2RRP1 2371 aa13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 NOTOA8MTQ0 251 aa13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 MAS1P04201 325 aa13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 ZNF35P13682 527 aa13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 ADRA2CP18825 462 aa13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 GNALP38405 381 aa13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 DDOSTP39656 456 aa13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 FAM3AP98173 230 aa13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 FBXL19-AS1Q494R0 122 aa13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 MTFR2Q6P444 385 aa13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 SEMA6DQ8NFY4 1073 aa13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 OR5L1Q8NGL2 311 aa13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 AP3S1Q92572 193 aa13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 GFI1Q99684 422 aa13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 REPIN1Q9BWE0 567 aaKnown RBP13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 PLEKHA1Q9HB21 404 aa13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 SMG1Q96Q15 3661 aaKnown RBP13.78□□□□□ -0.2
SNRPD3-201ENST00000215829 A0A075B6Q4 140 aa13.77□□□□□ -0.21
SNRPD3-201ENST00000215829 hCG_38984A0A1B0GV85 526 aa13.77□□□□□ -0.21
SNRPD3-201ENST00000215829 B8ZZF3 427 aa13.77□□□□□ -0.21
SNRPD3-201ENST00000215829 MAP2K3P46734 347 aa13.77□□□□□ -0.21
SNRPD3-201ENST00000215829 UQCRFS1P47985 274 aa13.77□□□□□ -0.21
SNRPD3-201ENST00000215829 GSK3AP49840 483 aa13.77□□□□□ -0.21
SNRPD3-201ENST00000215829 PSMD7P51665 324 aa13.77□□□□□ -0.21
SNRPD3-201ENST00000215829 GK2Q14410 553 aaPredicted RBP13.77□□□□□ -0.21
SNRPD3-201ENST00000215829 C4orf17Q53FE4 359 aa13.77□□□□□ -0.21
SNRPD3-201ENST00000215829 ZNF529Q6P280 563 aa13.77□□□□□ -0.21
SNRPD3-201ENST00000215829 SFXN4Q6P4A7 337 aa13.77□□□□□ -0.21
SNRPD3-201ENST00000215829 C22orf34Q6ZV56 151 aa13.77□□□□□ -0.21
SNRPD3-201ENST00000215829 PGAP1Q75T13 922 aa13.77□□□□□ -0.21
SNRPD3-201ENST00000215829 SSX8Q7RTT4 187 aa13.77□□□□□ -0.21
SNRPD3-201ENST00000215829 TBC1D15Q8TC07 691 aa13.77□□□□□ -0.21
SNRPD3-201ENST00000215829 PIGLQ9Y2B2 252 aa13.77□□□□□ -0.21
SNRPD3-201ENST00000215829 V9GY05 133 aa13.77□□□□□ -0.21
SNRPD3-201ENST00000215829 PRR14LQ5THK1 2151 aa13.77□□□□□ -0.21
SNRPD3-201ENST00000215829 MEGF11A6BM72 1044 aa13.76□□□□□ -0.21
SNRPD3-201ENST00000215829 EPXP11678 715 aa13.76□□□□□ -0.21
SNRPD3-201ENST00000215829 ACKR3P25106 362 aa13.76□□□□□ -0.21
SNRPD3-201ENST00000215829 THBS4P35443 961 aa13.76□□□□□ -0.21
SNRPD3-201ENST00000215829 ZNF83P51522 516 aa13.76□□□□□ -0.21
SNRPD3-201ENST00000215829 BMXP51813 675 aa13.76□□□□□ -0.21
SNRPD3-201ENST00000215829 UCP2P55851 309 aa13.76□□□□□ -0.21
SNRPD3-201ENST00000215829 PPP3R1P63098 170 aa13.76□□□□□ -0.21
SNRPD3-201ENST00000215829 RIPPLY1Q0D2K3 151 aa13.76□□□□□ -0.21
SNRPD3-201ENST00000215829 TNK1Q13470 666 aa13.76□□□□□ -0.21
SNRPD3-201ENST00000215829 OR8B8Q15620 311 aa13.76□□□□□ -0.21
SNRPD3-201ENST00000215829 LINC00299Q6ZSB3 139 aa13.76□□□□□ -0.21
SNRPD3-201ENST00000215829 RFPL4BQ6ZWI9 263 aa13.76□□□□□ -0.21
SNRPD3-201ENST00000215829 ITFG2Q969R8 447 aa13.76□□□□□ -0.21
SNRPD3-201ENST00000215829 C6orf62Q9GZU0 229 aaPredicted RBP13.76□□□□□ -0.21
SNRPD3-201ENST00000215829 OPA3Q9H6K4 179 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms