RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 KCNG3Q8TAE7 436 aa7.28□□□□□ -1.24
VAMP3-201ENST00000054666 SNAPC3Q92966 411 aa7.28□□□□□ -1.24
VAMP3-201ENST00000054666 CPNE4Q96A23 557 aaPredicted RBP7.28□□□□□ -1.24
VAMP3-201ENST00000054666 RADILQ96JH8 1075 aa7.28□□□□□ -1.24
VAMP3-201ENST00000054666 GPR137Q96N19 417 aa7.28□□□□□ -1.24
VAMP3-201ENST00000054666 PRRT1Q99946 306 aa7.28□□□□□ -1.24
VAMP3-201ENST00000054666 TMEM59Q9BXS4 323 aa7.28□□□□□ -1.24
VAMP3-201ENST00000054666 FOXJ2Q9P0K8 574 aa7.28□□□□□ -1.24
VAMP3-201ENST00000054666 PLEKHA6Q9Y2H5 1048 aa7.28□□□□□ -1.24
VAMP3-201ENST00000054666 FLVCR1Q9Y5Y0 555 aa7.28□□□□□ -1.24
VAMP3-201ENST00000054666 SDK2Q58EX2 2172 aa7.28□□□□□ -1.24
VAMP3-201ENST00000054666 WDR87Q6ZQQ6 2873 aa7.28□□□□□ -1.24
VAMP3-201ENST00000054666 TMEM14DPA8MWL7 114 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 LINC01387J3KSC0 135 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 M0QYG6 137 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 SNAPC5O75971 98 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 TOXO94900 526 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 MPIG6BO95866 241 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 CD74P04233 296 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 MELTFP08582 738 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 VSIG10L2P0DP72 767 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 CD59P13987 128 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 CNR1P21554 472 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 GNG2P59768 71 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 QRFPP83859 136 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 SCRN3Q0VDG4 424 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 ECH1Q13011 328 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 RAB35Q15286 201 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 HYAL4Q2M3T9 481 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 ZNF260Q3ZCT1 412 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 SCGB2B2Q4G0G5 96 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 PLA2G2CQ5R387 149 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 ABLIM2Q6H8Q1 611 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 SEZ6L2Q6UXD5 910 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 AAED1Q7RTV5 226 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 GGNQ86UU5 652 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 OR5AS1Q8N127 324 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 FTMTQ8N4E7 242 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 ZIC4Q8N9L1 334 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 OR11H4Q8NGC9 324 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 OR52B4Q8NGK2 314 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 OR10R2Q8NGX6 335 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 OR14K1Q8NGZ2 314 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 OR10D3Q8NH80 312 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 PP6455Q8WZ26 134 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 SPACA5Q96QH8 159 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 CDC6Q99741 560 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 URM1Q9BTM9 101 aaKnown RBP7.27□□□□□ -1.25
VAMP3-201ENST00000054666 CST11Q9H112 138 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 OR10A2Q9H208 303 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 POFUT1Q9H488 388 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 ZNF319Q9P2F9 582 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 MRPS18CQ9Y3D5 142 aaKnown RBP7.27□□□□□ -1.25
VAMP3-201ENST00000054666 VPS13AQ96RL7 3174 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 OR5H15A6NDH6 313 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 SGCEO43556 437 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 MT-CO3P00414 261 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 F10P00742 488 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 ITGB2P05107 769 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 TPOP07202 933 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 RFPL3SP0C7P2 107 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 ITGA3P26006 1051 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 OR3A4PP47883 348 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 HIST1H3AP68431 136 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 CDNFQ49AH0 187 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 C6orf183Q5T699 404 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 HIST2H3PS2Q5TEC6 136 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 FAM27BQ5VT28 67 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 HIST2H3AQ71DI3 136 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 SLC36A1Q7Z2H8 476 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 TMED4Q7Z7H5 227 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 PAQR4Q8N4S7 273 aaPredicted RBP7.27□□□□□ -1.25
VAMP3-201ENST00000054666 UXS1Q8NBZ7 420 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 OR52H1Q8NGJ2 320 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 NUDCD2Q8WVJ2 157 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 C10orf35Q96D05 121 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 CMBLQ96DG6 245 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 ALKBH3Q96Q83 286 aaPredicted RBP7.27□□□□□ -1.25
VAMP3-201ENST00000054666 S100A13Q99584 98 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 FAM173AQ9BQD7 235 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 SOX7Q9BT81 388 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 EDEM2Q9BV94 578 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 TINAGL1Q9GZM7 467 aaPredicted RBP7.27□□□□□ -1.25
VAMP3-201ENST00000054666 CRLF2Q9HC73 371 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 CA10Q9NS85 328 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 GHRLQ9UBU3 117 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 SLC23A1Q9UHI7 598 aa7.27□□□□□ -1.25
VAMP3-201ENST00000054666 WDFY3Q8IZQ1 3526 aa7.26□□□□□ -1.25
VAMP3-201ENST00000054666 F5H5P2 479 aa7.26□□□□□ -1.25
VAMP3-201ENST00000054666 GOSR2O14653 212 aa7.26□□□□□ -1.25
VAMP3-201ENST00000054666 CDC14BO60729 498 aa7.26□□□□□ -1.25
VAMP3-201ENST00000054666 CRTAPO75718 401 aaPredicted RBP7.26□□□□□ -1.25
VAMP3-201ENST00000054666 IGLV3-1P01715 115 aa7.26□□□□□ -1.25
VAMP3-201ENST00000054666 CSN2P05814 226 aa7.26□□□□□ -1.25
VAMP3-201ENST00000054666 GSTP1P09211 210 aaKnown RBP7.26□□□□□ -1.25
VAMP3-201ENST00000054666 CST2P09228 141 aa7.26□□□□□ -1.25
VAMP3-201ENST00000054666 GNB3P16520 340 aa7.26□□□□□ -1.25
VAMP3-201ENST00000054666 ZNF24P17028 368 aa7.26□□□□□ -1.25
VAMP3-201ENST00000054666 TBPP20226 339 aa7.26□□□□□ -1.25
VAMP3-201ENST00000054666 OTX1P32242 354 aaPredicted RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms