RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 LAP3P28838 519 aa11.63□□□□□ -0.55
CTNS-201ENST00000046640 HSD11B1P28845 292 aa11.63□□□□□ -0.55
CTNS-201ENST00000046640 HSPB2Q16082 182 aa11.63□□□□□ -0.55
CTNS-201ENST00000046640 ADAD2Q8NCV1 583 aaKnown RBP11.63□□□□□ -0.55
CTNS-201ENST00000046640 OR1S2Q8NGQ3 325 aa11.63□□□□□ -0.55
CTNS-201ENST00000046640 RNF133Q8WVZ7 376 aa11.63□□□□□ -0.55
CTNS-201ENST00000046640 CST11Q9H112 138 aa11.63□□□□□ -0.55
CTNS-201ENST00000046640 TMEM231Q9H6L2 316 aa11.63□□□□□ -0.55
CTNS-201ENST00000046640 SLC39A1Q9NY26 324 aa11.63□□□□□ -0.55
CTNS-201ENST00000046640 CYB5R1Q9UHQ9 305 aa11.63□□□□□ -0.55
CTNS-201ENST00000046640 GPN3Q9UHW5 284 aaPredicted RBP11.63□□□□□ -0.55
CTNS-201ENST00000046640 GDF2Q9UK05 429 aaPredicted RBP11.63□□□□□ -0.55
CTNS-201ENST00000046640 LHFPL6Q9Y693 200 aa11.63□□□□□ -0.55
CTNS-201ENST00000046640 OR2AT4A6NND4 320 aa11.63□□□□□ -0.55
CTNS-201ENST00000046640 AQP8O94778 261 aa11.63□□□□□ -0.55
CTNS-201ENST00000046640 QDPRP09417 244 aa11.63□□□□□ -0.55
CTNS-201ENST00000046640 MGMTP16455 207 aa11.63□□□□□ -0.55
CTNS-201ENST00000046640 CALCRP30988 508 aa11.63□□□□□ -0.55
CTNS-201ENST00000046640 SGCAQ16586 387 aa11.63□□□□□ -0.55
CTNS-201ENST00000046640 JMJD6Q6NYC1 403 aaPredicted RBP11.63□□□□□ -0.55
CTNS-201ENST00000046640 ABHD12BQ7Z5M8 362 aaPredicted RBP11.63□□□□□ -0.55
CTNS-201ENST00000046640 TRAPPC6BQ86SZ2 158 aa11.63□□□□□ -0.55
CTNS-201ENST00000046640 NAA40Q86UY6 237 aa11.63□□□□□ -0.55
CTNS-201ENST00000046640 FJX1Q86VR8 437 aa11.63□□□□□ -0.55
CTNS-201ENST00000046640 ZNF416Q9BWM5 594 aa11.63□□□□□ -0.55
CTNS-201ENST00000046640 C1orf198Q9H425 327 aa11.63□□□□□ -0.55
CTNS-201ENST00000046640 PCDHB16Q9NRJ7 776 aa11.63□□□□□ -0.55
CTNS-201ENST00000046640 FAM206AQ9NX38 181 aa11.63□□□□□ -0.55
CTNS-201ENST00000046640 ZNF319Q9P2F9 582 aa11.63□□□□□ -0.55
CTNS-201ENST00000046640 C5orf63A6NC05 138 aa11.62□□□□□ -0.55
CTNS-201ENST00000046640 CCL3P10147 92 aa11.62□□□□□ -0.55
CTNS-201ENST00000046640 GNB3P16520 340 aa11.62□□□□□ -0.55
CTNS-201ENST00000046640 CLDN6P56747 220 aa11.62□□□□□ -0.55
CTNS-201ENST00000046640 CLDN17P56750 224 aa11.62□□□□□ -0.55
CTNS-201ENST00000046640 IL13RA1P78552 427 aa11.62□□□□□ -0.55
CTNS-201ENST00000046640 C11orf87Q6NUJ2 197 aa11.62□□□□□ -0.55
CTNS-201ENST00000046640 MRPL14Q6P1L8 145 aaKnown RBP11.62□□□□□ -0.55
CTNS-201ENST00000046640 ZNF704Q6ZNC4 412 aaPredicted RBP11.62□□□□□ -0.55
CTNS-201ENST00000046640 OR2AJ1Q8NGZ0 328 aa11.62□□□□□ -0.55
CTNS-201ENST00000046640 PAQR8Q8TEZ7 354 aa11.62□□□□□ -0.55
CTNS-201ENST00000046640 NPRL2Q8WTW4 380 aa11.62□□□□□ -0.55
CTNS-201ENST00000046640 MRPL13Q9BYD1 178 aaKnown RBP11.62□□□□□ -0.55
CTNS-201ENST00000046640 MED9Q9NWA0 146 aa11.62□□□□□ -0.55
CTNS-201ENST00000046640 RASL12Q9NYN1 266 aa11.62□□□□□ -0.55
CTNS-201ENST00000046640 C19orf25Q9UFG5 118 aaPredicted RBP11.62□□□□□ -0.55
CTNS-201ENST00000046640 SLC5A6Q9Y289 635 aa11.62□□□□□ -0.55
CTNS-201ENST00000046640 CHCHD2Q9Y6H1 151 aaPredicted RBP11.62□□□□□ -0.55
CTNS-201ENST00000046640 IGHG1P01857 330 aa11.62□□□□□ -0.55
CTNS-201ENST00000046640 PMP2P02689 132 aa11.62□□□□□ -0.55
CTNS-201ENST00000046640 KLK3P07288 261 aaPredicted RBP11.62□□□□□ -0.55
CTNS-201ENST00000046640 ZNF735P0CB33 412 aa11.62□□□□□ -0.55
CTNS-201ENST00000046640 UBBP0CG47 229 aa11.62□□□□□ -0.55
CTNS-201ENST00000046640 UBCP0CG48 685 aaKnown RBP11.62□□□□□ -0.55
CTNS-201ENST00000046640 RPL35P42766 123 aaKnown RBP11.62□□□□□ -0.55
CTNS-201ENST00000046640 SUMO3P55854 103 aaPredicted RBP11.62□□□□□ -0.55
CTNS-201ENST00000046640 RPS18P62269 152 aaKnown RBP11.62□□□□□ -0.55
CTNS-201ENST00000046640 RPS27AP62979 156 aaKnown RBP11.62□□□□□ -0.55
CTNS-201ENST00000046640 UBA52P62987 128 aaKnown RBP11.62□□□□□ -0.55
CTNS-201ENST00000046640 RNASE10Q5GAN6 216 aaKnown RBP11.62□□□□□ -0.55
CTNS-201ENST00000046640 TMEM244Q5VVB8 128 aa11.62□□□□□ -0.55
CTNS-201ENST00000046640 RAET1LQ5VY80 246 aa11.62□□□□□ -0.55
CTNS-201ENST00000046640 RAB12Q6IQ22 244 aa11.62□□□□□ -0.55
CTNS-201ENST00000046640 ADGRE4PQ86SQ3 457 aa11.62□□□□□ -0.55
CTNS-201ENST00000046640 LRRC18Q8N456 261 aa11.62□□□□□ -0.55
CTNS-201ENST00000046640 OR5M8Q8NGP6 311 aa11.62□□□□□ -0.55
CTNS-201ENST00000046640 ROBO4Q8WZ75 1007 aa11.62□□□□□ -0.55
CTNS-201ENST00000046640 NKX6-2Q9C056 277 aaPredicted RBP11.62□□□□□ -0.55
CTNS-201ENST00000046640 GLS2Q9UI32 602 aa11.62□□□□□ -0.55
CTNS-201ENST00000046640 EXPH5Q8NEV8 1989 aa11.62□□□□□ -0.55
CTNS-201ENST00000046640 ZNF726A6NNF4 738 aa11.61□□□□□ -0.55
CTNS-201ENST00000046640 TRAF3IP2O43734 574 aaPredicted RBP11.61□□□□□ -0.55
CTNS-201ENST00000046640 UMODP07911 640 aa11.61□□□□□ -0.55
CTNS-201ENST00000046640 PGA4P0DJD7 388 aa11.61□□□□□ -0.55
CTNS-201ENST00000046640 PGA3P0DJD8 388 aa11.61□□□□□ -0.55
CTNS-201ENST00000046640 PNLIPP16233 465 aa11.61□□□□□ -0.55
CTNS-201ENST00000046640 PI3P19957 117 aa11.61□□□□□ -0.55
CTNS-201ENST00000046640 CNR1P21554 472 aa11.61□□□□□ -0.55
CTNS-201ENST00000046640 PCOLCEQ15113 449 aa11.61□□□□□ -0.55
CTNS-201ENST00000046640 TMPPEQ6ZT21 453 aa11.61□□□□□ -0.55
CTNS-201ENST00000046640 TMEM229BQ8NBD8 167 aa11.61□□□□□ -0.55
CTNS-201ENST00000046640 UCN2Q96RP3 112 aa11.61□□□□□ -0.55
CTNS-201ENST00000046640 SLC25A32Q9H2D1 315 aa11.61□□□□□ -0.55
CTNS-201ENST00000046640 MBD2Q9UBB5 411 aa11.61□□□□□ -0.55
CTNS-201ENST00000046640 WIPF3A6NGB9 483 aa11.61□□□□□ -0.55
CTNS-201ENST00000046640 DISC1C4P0D8 188 aa11.61□□□□□ -0.55
CTNS-201ENST00000046640 WDPCPO95876 746 aa11.61□□□□□ -0.55
CTNS-201ENST00000046640 ERCC1P07992 297 aaPredicted RBP11.61□□□□□ -0.55
CTNS-201ENST00000046640 HRH1P35367 487 aa11.61□□□□□ -0.55
CTNS-201ENST00000046640 P2RY4P51582 365 aa11.61□□□□□ -0.55
CTNS-201ENST00000046640 MPPED2Q15777 294 aa11.61□□□□□ -0.55
CTNS-201ENST00000046640 TRIM61Q5EBN2 209 aa11.61□□□□□ -0.55
CTNS-201ENST00000046640 ZNF468Q5VIY5 522 aaPredicted RBP11.61□□□□□ -0.55
CTNS-201ENST00000046640 ARMC10Q8N2F6 343 aa11.61□□□□□ -0.55
CTNS-201ENST00000046640 OR5D18Q8NGL1 313 aa11.61□□□□□ -0.55
CTNS-201ENST00000046640 TSNAXQ99598 290 aaKnown RBP11.61□□□□□ -0.55
CTNS-201ENST00000046640 ZNF160Q9HCG1 818 aa11.61□□□□□ -0.55
CTNS-201ENST00000046640 PCDHB10Q9UN67 800 aa11.61□□□□□ -0.55
CTNS-201ENST00000046640 A0A0B4J2A0 478 aa11.61□□□□□ -0.55
CTNS-201ENST00000046640 A0A0D9SG52 128 aa11.61□□□□□ -0.55
CTNS-201ENST00000046640 RNF222A6NCQ9 220 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms