RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 MICBQ29980 383 aa9.27□□□□□ -0.93
NIPAL3-201ENST00000003912 C12orf73Q69YU5 71 aa9.27□□□□□ -0.93
NIPAL3-201ENST00000003912 DEGS2Q6QHC5 323 aa9.27□□□□□ -0.93
NIPAL3-201ENST00000003912 FJX1Q86VR8 437 aa9.27□□□□□ -0.93
NIPAL3-201ENST00000003912 OR2AK2Q8NG84 335 aa9.27□□□□□ -0.93
NIPAL3-201ENST00000003912 DVL3Q92997 716 aaPredicted RBP9.27□□□□□ -0.93
NIPAL3-201ENST00000003912 LIN37Q96GY3 246 aaPredicted RBP9.27□□□□□ -0.93
NIPAL3-201ENST00000003912 SPACA5Q96QH8 159 aa9.27□□□□□ -0.93
NIPAL3-201ENST00000003912 TSPAN32Q96QS1 320 aa9.27□□□□□ -0.93
NIPAL3-201ENST00000003912 DUSP21Q9H596 190 aa9.27□□□□□ -0.93
NIPAL3-201ENST00000003912 LTBP1Q14766 1721 aa9.27□□□□□ -0.93
NIPAL3-201ENST00000003912 K7EPK0 472 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 TSPAN4O14817 238 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 PHLDA2Q53GA4 152 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 KRTCAP3Q53RY4 240 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 SSX8Q7RTT4 187 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 KANSL1Q7Z3B3 1105 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 FAM71E2Q8N5Q1 922 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 SEH1LQ96EE3 360 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 SMIM3Q9BZL3 60 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 ST3GAL6Q9Y274 331 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 TMEM127O75204 238 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 ZNF17P17021 662 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 RPS19P39019 145 aaKnown RBP9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 GPM6AP51674 278 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 BLOC1S1P78537 153 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 TAF9Q16594 264 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 SHEQ5VZ18 495 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 OR52W1Q6IF63 320 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 LYPD8Q6UX82 237 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 SIAH3Q8IW03 269 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 OR4Q3Q8NH05 313 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 SMAP2Q8WU79 429 aaPredicted RBP9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 EDARADDQ8WWZ3 215 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 SLAMF9Q96A28 289 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 CCL21O00585 134 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 CDX4O14627 284 aaPredicted RBP9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 CT45A6P0DMU7 189 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 CT45A5P0DMU8 189 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 CT45A7P0DMV0 189 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 CT45A8P0DMV1 189 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 CT45A9P0DMV2 189 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 LIFP15018 202 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 NPY4RP50391 375 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 CCR9P51686 369 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 PCBP3P57721 371 aaKnown RBP9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 CDC20Q12834 499 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 CD226Q15762 336 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 CT45A2Q5DJT8 189 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 CT45A1Q5HYN5 189 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 FAM219BQ5XKK7 198 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 HEPHL1Q6MZM0 1159 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 STAC2Q6ZMT1 411 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 C9orf40Q8IXQ3 194 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 CT45A3Q8NHU0 189 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 MRPS24Q96EL2 167 aaKnown RBP9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 TSNAXQ99598 290 aaKnown RBP9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 DOK1Q99704 481 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 RBFOX1Q9NWB1 397 aaKnown RBP9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 SPDEFO95238 335 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 TATDN3Q17R31 274 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 ZNF774Q6NX45 483 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 BRICD5Q6PL45 260 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 ZNF721Q8TF20 911 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 KCNIP2Q9NS61 270 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 FOXJ3Q9UPW0 622 aa9.26□□□□□ -0.93
NIPAL3-201ENST00000003912 LIPT2A6NK58 231 aa9.25□□□□□ -0.93
NIPAL3-201ENST00000003912 PPIHO43447 177 aaKnown RBP9.25□□□□□ -0.93
NIPAL3-201ENST00000003912 DNPH1O43598 174 aa9.25□□□□□ -0.93
NIPAL3-201ENST00000003912 HLA-HP01893 362 aa9.25□□□□□ -0.93
NIPAL3-201ENST00000003912 ZNF528Q3MIS6 628 aa9.25□□□□□ -0.93
NIPAL3-201ENST00000003912 SOWAHCQ53LP3 525 aaPredicted RBP9.25□□□□□ -0.93
NIPAL3-201ENST00000003912 PRAMEF5Q5TYX0 476 aa9.25□□□□□ -0.93
NIPAL3-201ENST00000003912 PRAMEF6Q5VXH4 476 aa9.25□□□□□ -0.93
NIPAL3-201ENST00000003912 OR2T2Q6IF00 324 aa9.25□□□□□ -0.93
NIPAL3-201ENST00000003912 ARL11Q969Q4 196 aa9.25□□□□□ -0.93
NIPAL3-201ENST00000003912 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.25□□□□□ -0.93
NIPAL3-201ENST00000003912 SIPA1L1O43166 1804 aa9.25□□□□□ -0.93
NIPAL3-201ENST00000003912 ERGP11308 486 aa9.25□□□□□ -0.93
NIPAL3-201ENST00000003912 TAS2R30P59541 319 aa9.25□□□□□ -0.93
NIPAL3-201ENST00000003912 CDK5Q00535 292 aa9.25□□□□□ -0.93
NIPAL3-201ENST00000003912 NCCRP1Q6ZVX7 275 aaPredicted RBP9.25□□□□□ -0.93
NIPAL3-201ENST00000003912 CATSPERDQ86XM0 798 aa9.25□□□□□ -0.93
NIPAL3-201ENST00000003912 OR2M3Q8NG83 312 aa9.25□□□□□ -0.93
NIPAL3-201ENST00000003912 TM4SF19Q96DZ7 209 aa9.25□□□□□ -0.93
NIPAL3-201ENST00000003912 SLC23A1Q9UHI7 598 aa9.25□□□□□ -0.93
NIPAL3-201ENST00000003912 IGHV1-45A0A0A0MS14 117 aa9.25□□□□□ -0.93
NIPAL3-201ENST00000003912 LNP1A1A4G5 178 aa9.25□□□□□ -0.93
NIPAL3-201ENST00000003912 IFITM5A6NNB3 132 aa9.25□□□□□ -0.93
NIPAL3-201ENST00000003912 HRKO00198 91 aa9.25□□□□□ -0.93
NIPAL3-201ENST00000003912 RER1O15258 196 aa9.25□□□□□ -0.93
NIPAL3-201ENST00000003912 NKX2-8O15522 239 aa9.25□□□□□ -0.93
NIPAL3-201ENST00000003912 PMS2P2O95744 297 aa9.25□□□□□ -0.93
NIPAL3-201ENST00000003912 PPP1CBP62140 327 aa9.25□□□□□ -0.93
NIPAL3-201ENST00000003912 ATPAF1Q5TC12 328 aaPredicted RBP9.25□□□□□ -0.93
NIPAL3-201ENST00000003912 TUSC5Q8IXB3 177 aa9.25□□□□□ -0.93
NIPAL3-201ENST00000003912 OR51H1Q8NH63 302 aa9.25□□□□□ -0.93
NIPAL3-201ENST00000003912 TTTY12Q9BZ98 90 aa9.25□□□□□ -0.93
NIPAL3-201ENST00000003912 PILRAQ9UKJ1 303 aa9.25□□□□□ -0.93
NIPAL3-201ENST00000003912 AQP7P3A6NL99 342 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms