RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 DNAJC9-AS1A6NH13 148 aa11.63□□□□□ -0.55
LINC00339-211ENST00000641009 FAM20BO75063 409 aa11.63□□□□□ -0.55
LINC00339-211ENST00000641009 CCNB2O95067 398 aa11.63□□□□□ -0.55
LINC00339-211ENST00000641009 GYPBP06028 91 aa11.63□□□□□ -0.55
LINC00339-211ENST00000641009 IGHV4-38-2P0DP08 117 aa11.63□□□□□ -0.55
LINC00339-211ENST00000641009 IRF2P14316 349 aa11.63□□□□□ -0.55
LINC00339-211ENST00000641009 CA6P23280 308 aa11.63□□□□□ -0.55
LINC00339-211ENST00000641009 CD200P41217 278 aa11.63□□□□□ -0.55
LINC00339-211ENST00000641009 MAGEA2P43356 314 aa11.63□□□□□ -0.55
LINC00339-211ENST00000641009 RAD23AP54725 363 aa11.63□□□□□ -0.55
LINC00339-211ENST00000641009 ZNF92Q03936 586 aa11.63□□□□□ -0.55
LINC00339-211ENST00000641009 OR8G1Q15617 311 aa11.63□□□□□ -0.55
LINC00339-211ENST00000641009 AWAT1Q58HT5 328 aa11.63□□□□□ -0.55
LINC00339-211ENST00000641009 LYPD2Q6UXB3 125 aa11.63□□□□□ -0.55
LINC00339-211ENST00000641009 RASSF6Q6ZTQ3 369 aa11.63□□□□□ -0.55
LINC00339-211ENST00000641009 DOK3Q7L591 496 aa11.63□□□□□ -0.55
LINC00339-211ENST00000641009 DCXRQ7Z4W1 244 aa11.63□□□□□ -0.55
LINC00339-211ENST00000641009 LINC00471Q8N535 108 aa11.63□□□□□ -0.55
LINC00339-211ENST00000641009 CELF2-AS1Q8N7Q2 184 aa11.63□□□□□ -0.55
LINC00339-211ENST00000641009 AQP11Q8NBQ7 271 aa11.63□□□□□ -0.55
LINC00339-211ENST00000641009 OR8B3Q8NGG8 313 aa11.63□□□□□ -0.55
LINC00339-211ENST00000641009 PLEKHA8Q96JA3 519 aa11.63□□□□□ -0.55
LINC00339-211ENST00000641009 C1orf147Q96MC9 270 aaPredicted RBP11.63□□□□□ -0.55
LINC00339-211ENST00000641009 OR8B2Q96RD0 313 aa11.63□□□□□ -0.55
LINC00339-211ENST00000641009 TSSK6Q9BXA6 273 aa11.63□□□□□ -0.55
LINC00339-211ENST00000641009 SOX21Q9Y651 276 aaPredicted RBP11.63□□□□□ -0.55
LINC00339-211ENST00000641009 U3KQV3 271 aa11.63□□□□□ -0.55
LINC00339-211ENST00000641009 CD300LBA8K4G0 201 aa11.62□□□□□ -0.55
LINC00339-211ENST00000641009 B2RBV5 119 aa11.62□□□□□ -0.55
LINC00339-211ENST00000641009 SOX14O95416 240 aa11.62□□□□□ -0.55
LINC00339-211ENST00000641009 FSTL3O95633 263 aa11.62□□□□□ -0.55
LINC00339-211ENST00000641009 SPARCP09486 303 aa11.62□□□□□ -0.55
LINC00339-211ENST00000641009 CLUP10909 449 aa11.62□□□□□ -0.55
LINC00339-211ENST00000641009 OTX1P32242 354 aaPredicted RBP11.62□□□□□ -0.55
LINC00339-211ENST00000641009 PITPNBP48739 271 aa11.62□□□□□ -0.55
LINC00339-211ENST00000641009 CRMP1Q14194 572 aa11.62□□□□□ -0.55
LINC00339-211ENST00000641009 GLYATL3Q5SZD4 288 aa11.62□□□□□ -0.55
LINC00339-211ENST00000641009 BTNL3Q6UXE8 466 aa11.62□□□□□ -0.55
LINC00339-211ENST00000641009 LRRN1Q6UXK5 716 aa11.62□□□□□ -0.55
LINC00339-211ENST00000641009 PARP8Q8N3A8 854 aa11.62□□□□□ -0.55
LINC00339-211ENST00000641009 LNX2Q8N448 690 aa11.62□□□□□ -0.55
LINC00339-211ENST00000641009 FITM2Q8N6M3 262 aa11.62□□□□□ -0.55
LINC00339-211ENST00000641009 ZNF511Q8NB15 262 aa11.62□□□□□ -0.55
LINC00339-211ENST00000641009 OR11L1Q8NGX0 322 aa11.62□□□□□ -0.55
LINC00339-211ENST00000641009 OR4Q3Q8NH05 313 aa11.62□□□□□ -0.55
LINC00339-211ENST00000641009 Q8TCH9 128 aa11.62□□□□□ -0.55
LINC00339-211ENST00000641009 RAB40AQ8WXH6 277 aa11.62□□□□□ -0.55
LINC00339-211ENST00000641009 DACT3Q96B18 629 aaPredicted RBP11.62□□□□□ -0.55
LINC00339-211ENST00000641009 COPS4Q9BT78 406 aa11.62□□□□□ -0.55
LINC00339-211ENST00000641009 ADAT1Q9BUB4 502 aaKnown RBP11.62□□□□□ -0.55
LINC00339-211ENST00000641009 MS4A7Q9GZW8 240 aaPredicted RBP11.62□□□□□ -0.55
LINC00339-211ENST00000641009 ARMC1Q9NVT9 282 aa11.62□□□□□ -0.55
LINC00339-211ENST00000641009 N6AMT1Q9Y5N5 214 aa11.62□□□□□ -0.55
LINC00339-211ENST00000641009 SLC2A1P11166 492 aa11.61□□□□□ -0.55
LINC00339-211ENST00000641009 CPT2P23786 658 aa11.61□□□□□ -0.55
LINC00339-211ENST00000641009 PRTN3P24158 256 aa11.61□□□□□ -0.55
LINC00339-211ENST00000641009 ENTPD1P49961 510 aa11.61□□□□□ -0.55
LINC00339-211ENST00000641009 PRKXP51817 358 aa11.61□□□□□ -0.55
LINC00339-211ENST00000641009 BAMBIQ13145 260 aa11.61□□□□□ -0.55
LINC00339-211ENST00000641009 DRAM2Q6UX65 266 aa11.61□□□□□ -0.55
LINC00339-211ENST00000641009 DCDC5Q6ZRR9 648 aa11.61□□□□□ -0.55
LINC00339-211ENST00000641009 NLRC3Q7RTR2 1065 aa11.61□□□□□ -0.55
LINC00339-211ENST00000641009 ERGIC1Q969X5 290 aa11.61□□□□□ -0.55
LINC00339-211ENST00000641009 SLAMF6Q96DU3 332 aa11.61□□□□□ -0.55
LINC00339-211ENST00000641009 MAGIXQ9H6Y5 334 aa11.61□□□□□ -0.55
LINC00339-211ENST00000641009 CENPMQ9NSP4 180 aa11.61□□□□□ -0.55
LINC00339-211ENST00000641009 CLN8Q9UBY8 286 aa11.61□□□□□ -0.55
LINC00339-211ENST00000641009 SAMHD1Q9Y3Z3 626 aaKnown RBP11.61□□□□□ -0.55
LINC00339-211ENST00000641009 MEGF8Q7Z7M0 2845 aa11.61□□□□□ -0.55
LINC00339-211ENST00000641009 TRAV40A0A0B4J280 105 aa11.6□□□□□ -0.55
LINC00339-211ENST00000641009 GGT3PA6NGU5 568 aa11.6□□□□□ -0.55
LINC00339-211ENST00000641009 ZNF593O00488 134 aaPredicted RBP11.6□□□□□ -0.55
LINC00339-211ENST00000641009 HKR1P10072 659 aa11.6□□□□□ -0.55
LINC00339-211ENST00000641009 SPI1P17947 270 aa11.6□□□□□ -0.55
LINC00339-211ENST00000641009 EGR1P18146 543 aa11.6□□□□□ -0.55
LINC00339-211ENST00000641009 FMO3P31513 532 aa11.6□□□□□ -0.55
LINC00339-211ENST00000641009 MNAT1P51948 309 aa11.6□□□□□ -0.55
LINC00339-211ENST00000641009 MS4A2Q01362 244 aa11.6□□□□□ -0.55
LINC00339-211ENST00000641009 TAF13Q15543 124 aa11.6□□□□□ -0.55
LINC00339-211ENST00000641009 MICAQ29983 383 aa11.6□□□□□ -0.55
LINC00339-211ENST00000641009 WDR25Q64LD2 544 aaPredicted RBP11.6□□□□□ -0.55
LINC00339-211ENST00000641009 SFRP4Q6FHJ7 346 aaPredicted RBP11.6□□□□□ -0.55
LINC00339-211ENST00000641009 OR2T5Q6IEZ7 315 aa11.6□□□□□ -0.55
LINC00339-211ENST00000641009 LCN8Q6JVE9 175 aa11.6□□□□□ -0.55
LINC00339-211ENST00000641009 ZNF841Q6ZN19 808 aa11.6□□□□□ -0.55
LINC00339-211ENST00000641009 SPATC1Q76KD6 591 aa11.6□□□□□ -0.55
LINC00339-211ENST00000641009 DHFR2Q86XF0 187 aa11.6□□□□□ -0.55
LINC00339-211ENST00000641009 BOLLQ8N9W6 283 aaKnown RBP11.6□□□□□ -0.55
LINC00339-211ENST00000641009 OR6K6Q8NGW6 343 aa11.6□□□□□ -0.55
LINC00339-211ENST00000641009 OR2T29Q8NH02 315 aa11.6□□□□□ -0.55
LINC00339-211ENST00000641009 UPRTQ96BW1 309 aa11.6□□□□□ -0.55
LINC00339-211ENST00000641009 ZMYND19Q96E35 227 aaPredicted RBP11.6□□□□□ -0.55
LINC00339-211ENST00000641009 NUDT16L1Q9BRJ7 211 aaKnown RBP11.6□□□□□ -0.55
LINC00339-211ENST00000641009 NMNAT2Q9BZQ4 307 aa11.6□□□□□ -0.55
LINC00339-211ENST00000641009 SLC22A4Q9H015 551 aa11.6□□□□□ -0.55
LINC00339-211ENST00000641009 REEP1Q9H902 201 aa11.6□□□□□ -0.55
LINC00339-211ENST00000641009 FN3KRPQ9HA64 309 aa11.6□□□□□ -0.55
LINC00339-211ENST00000641009 KIR2DS1A0A191URI9 304 aa11.59□□□□□ -0.55
LINC00339-211ENST00000641009 ZNF878C9JN71 531 aa11.59□□□□□ -0.55
LINC00339-211ENST00000641009 C3orf80F5H4A9 247 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms