RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 KDM8Q8N371 416 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 OR1M1Q8NGA1 313 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 NEIL3Q8TAT5 605 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 RPL3LQ92901 407 aaKnown RBP4.52□□□□□ -1.69
SCN1A-218ENST00000640036 NT5C3BQ969T7 300 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 RBMXL1Q96E39 390 aaKnown RBP4.52□□□□□ -1.69
SCN1A-218ENST00000640036 ADAT1Q9BUB4 502 aaKnown RBP4.52□□□□□ -1.69
SCN1A-218ENST00000640036 CACNG6Q9BXT2 260 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 TTTY12Q9BZ98 90 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 FZR1Q9UM11 496 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 A0A1W2PRD5 423 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 A0A1W2PRF3 423 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 A0A1W2PRM7 423 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 FAM24AA6NFZ4 105 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 K7ENP7 123 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 B4GALT1P15291 398 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 PRKACAP17612 351 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 AQP2P41181 271 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 ZNF136P52737 540 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 MAP4K2Q12851 820 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 GPR50Q13585 617 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 ZNF273Q14593 569 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 C18orf21Q32NC0 220 aaPredicted RBP4.52□□□□□ -1.69
SCN1A-218ENST00000640036 SPATA46Q5T0L3 261 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 ZNF322Q6U7Q0 402 aaPredicted RBP4.52□□□□□ -1.69
SCN1A-218ENST00000640036 SVBPQ8N300 66 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 OR4X2Q8NGF9 303 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 OR2A1Q8NGT9 310 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 OR4C3Q8NH37 302 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 LINC01560Q8TB33 94 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 MOB3AQ96BX8 217 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 TM4SF18Q96CE8 201 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 ZMYND19Q96E35 227 aaPredicted RBP4.52□□□□□ -1.69
SCN1A-218ENST00000640036 COMMD5Q9GZQ3 224 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 MRPL22Q9NWU5 206 aaKnown RBP4.52□□□□□ -1.69
SCN1A-218ENST00000640036 KCNG2Q9UJ96 466 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 ADAMTS6Q9UKP5 1117 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 STUB1Q9UNE7 303 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 SORL1Q92673 2214 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 A0A1W2PPV4 95 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 A0A1W2PS29 197 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 OR2A25A4D2G3 310 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 TMEM233B4DJY2 109 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 FRS3O43559 492 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 PRKACGP22612 351 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 GPR12P47775 334 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 MRPL19P49406 292 aaKnown RBP4.52□□□□□ -1.69
SCN1A-218ENST00000640036 ERVFRD-1P60508 538 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 RAP2BP61225 183 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 GUCA2BQ16661 112 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 MEP1BQ16820 701 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 SHEQ5VZ18 495 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 Q8IYB0 196 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 FRZBQ92765 325 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 L3HYPDHQ96EM0 354 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 PLCXD1Q9NUJ7 323 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 GPR45Q9Y5Y3 372 aa4.52□□□□□ -1.69
SCN1A-218ENST00000640036 METTL15A6NJ78 407 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 B9A039 149 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 ALG1L2C9J202 215 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 SULT1C4O75897 302 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 FBP1P09467 338 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 OR8U9P0C7N5 309 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 CELP19835 753 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 CDNFQ49AH0 187 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 RPS26P11Q5JNZ5 115 aaPredicted RBP4.51□□□□□ -1.69
SCN1A-218ENST00000640036 FAM27D1Q5T7N8 215 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 C22orf42Q6IC83 251 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 SBSNQ6UWP8 590 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 DOLPP1Q86YN1 238 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 SLC35F2Q8IXU6 374 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 PRSS33Q8NF86 280 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 OR8J1Q8NGP2 316 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 FAM57AQ8TBR7 257 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 ZFAND1Q8TCF1 268 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 ZNF431Q8TF32 576 aaPredicted RBP4.51□□□□□ -1.69
SCN1A-218ENST00000640036 RASD2Q96D21 266 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 INPP5KQ9BT40 448 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 ACPTQ9BZG2 426 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 LYRM2Q9NU23 88 aaPredicted RBP4.51□□□□□ -1.69
SCN1A-218ENST00000640036 C13orf42A0A1B0GVH6 325 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 A0A1B0GWA3 101 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 TERTO14746 1132 aaKnown RBP4.51□□□□□ -1.69
SCN1A-218ENST00000640036 EEDO75530 441 aaKnown RBP4.51□□□□□ -1.69
SCN1A-218ENST00000640036 B3GALT4O96024 378 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 MAS1P04201 325 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 PAX6P26367 422 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 NPY4RP50391 375 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 GNG3P63215 75 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 GUCA2AQ02747 115 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 VMA21Q3ZAQ7 101 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 NADK2Q4G0N4 442 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 FAM198BQ6UWH4 519 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 HS3ST5Q8IZT8 346 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 TMEM251Q8N6I4 163 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 SGK3Q96BR1 496 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 OR2A5Q96R48 311 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 NICN1Q9BSH3 213 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 FUNDC2Q9BWH2 189 aa4.51□□□□□ -1.69
SCN1A-218ENST00000640036 GCM1Q9NP62 436 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms