RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 RAC1P63000 192 aa13.32□□□□□ -0.28
TRIM3-215ENST00000639856 OR1C1Q15619 314 aa13.32□□□□□ -0.28
TRIM3-215ENST00000639856 WIPI1Q5MNZ9 446 aaPredicted RBP13.32□□□□□ -0.28
TRIM3-215ENST00000639856 ZNF627Q7L945 461 aa13.32□□□□□ -0.28
TRIM3-215ENST00000639856 OR1J2Q8NGS2 313 aa13.32□□□□□ -0.28
TRIM3-215ENST00000639856 SEH1LQ96EE3 360 aa13.32□□□□□ -0.28
TRIM3-215ENST00000639856 SRXN1Q9BYN0 137 aa13.32□□□□□ -0.28
TRIM3-215ENST00000639856 METTL17Q9H7H0 456 aaPredicted RBP13.32□□□□□ -0.28
TRIM3-215ENST00000639856 TMEM138Q9NPI0 162 aa13.32□□□□□ -0.28
TRIM3-215ENST00000639856 RYDENQ9NUL5 291 aaKnown RBP13.32□□□□□ -0.28
TRIM3-215ENST00000639856 A0A1B0GTI1 187 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 EIF1BO60739 113 aaKnown RBP13.31□□□□□ -0.28
TRIM3-215ENST00000639856 CD3DP04234 171 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 NR2C1P13056 603 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 RAB6AP20340 208 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 DNASE1P24855 282 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 GDF1P27539 372 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 STARP49675 285 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 TAF13Q15543 124 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 ZNF626Q68DY1 528 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 OR10K2Q6IF99 312 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 ZNF767PQ75MW2 155 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 MEIOBQ8N635 442 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 OR1M1Q8NGA1 313 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 OR5D14Q8NGL3 314 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 OR6N1Q8NGY5 312 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 GPR137Q96N19 417 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 IP6K3Q96PC2 410 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 GAL3ST1Q99999 423 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 GINS4Q9BRT9 223 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 CNTD2Q9H8S5 307 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 SCPEP1Q9HB40 452 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 PNRC2Q9NPJ4 139 aaKnown RBP13.31□□□□□ -0.28
TRIM3-215ENST00000639856 ARGFXA6NJG6 315 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 RER1O15258 196 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 ENPP1P22413 925 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 CD82P27701 267 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 CASRP41180 1078 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 PRKXP51817 358 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 GALK2Q01415 458 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 PMPCAQ10713 525 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 STEAP1BQ6NZ63 245 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 ZNF529Q6P280 563 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 NLRC3Q7RTR2 1065 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 SPICQ8N5J4 248 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 OR2M7Q8NG81 312 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 OR52N4Q8NGI2 321 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 OR51E1Q8TCB6 317 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 SNAPC3Q92966 411 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 FER1L6-AS2Q96M78 137 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 SFXN2Q96NB2 322 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 PRRX2Q99811 253 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 SLCO5A1Q9H2Y9 848 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 GLTPQ9NZD2 209 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 MYEF2Q9P2K5 600 aaKnown RBP13.31□□□□□ -0.28
TRIM3-215ENST00000639856 ZNF69Q9UC07 566 aa13.31□□□□□ -0.28
TRIM3-215ENST00000639856 LOC400499M0QZD8 3231 aa13.3□□□□□ -0.28
TRIM3-215ENST00000639856 VAMP5O95183 116 aa13.3□□□□□ -0.28
TRIM3-215ENST00000639856 NOVA1P51513 510 aaKnown RBP13.3□□□□□ -0.28
TRIM3-215ENST00000639856 ZNF121P58317 390 aaPredicted RBP13.3□□□□□ -0.28
TRIM3-215ENST00000639856 TAS2R19P59542 299 aa13.3□□□□□ -0.28
TRIM3-215ENST00000639856 C6orf183Q5T699 404 aa13.3□□□□□ -0.28
TRIM3-215ENST00000639856 SLC36A1Q7Z2H8 476 aa13.3□□□□□ -0.28
TRIM3-215ENST00000639856 GGNQ86UU5 652 aa13.3□□□□□ -0.28
TRIM3-215ENST00000639856 SLC22A24Q8N4F4 322 aa13.3□□□□□ -0.28
TRIM3-215ENST00000639856 OR51S1Q8NGJ8 323 aa13.3□□□□□ -0.28
TRIM3-215ENST00000639856 OR2T35Q8NGX2 323 aa13.3□□□□□ -0.28
TRIM3-215ENST00000639856 UQCC2Q9BRT2 126 aa13.3□□□□□ -0.28
TRIM3-215ENST00000639856 ABI3Q9P2A4 366 aa13.3□□□□□ -0.28
TRIM3-215ENST00000639856 MGAT4CQ9UBM8 478 aa13.3□□□□□ -0.28
TRIM3-215ENST00000639856 SLC23A1Q9UHI7 598 aa13.3□□□□□ -0.28
TRIM3-215ENST00000639856 RAB22AQ9UL26 194 aa13.3□□□□□ -0.28
TRIM3-215ENST00000639856 NCOA6Q14686 2063 aaPredicted RBP13.3□□□□□ -0.28
TRIM3-215ENST00000639856 PTPRZ1P23471 2315 aaPredicted RBP13.3□□□□□ -0.28
TRIM3-215ENST00000639856 ZFHX4Q86UP3 3567 aa13.3□□□□□ -0.28
TRIM3-215ENST00000639856 METTL21EPA6NDL7 271 aa13.3□□□□□ -0.28
TRIM3-215ENST00000639856 CELA3AP09093 270 aa13.3□□□□□ -0.28
TRIM3-215ENST00000639856 RAB3AP20336 220 aa13.3□□□□□ -0.28
TRIM3-215ENST00000639856 SUCLG1P53597 346 aaKnown RBP13.3□□□□□ -0.28
TRIM3-215ENST00000639856 LSM6P62312 80 aaKnown RBP13.3□□□□□ -0.28
TRIM3-215ENST00000639856 POU4F3Q15319 338 aa13.3□□□□□ -0.28
TRIM3-215ENST00000639856 MOGAT2Q3SYC2 334 aa13.3□□□□□ -0.28
TRIM3-215ENST00000639856 GABRG1Q8N1C3 465 aa13.3□□□□□ -0.28
TRIM3-215ENST00000639856 GALNT16Q8N428 558 aa13.3□□□□□ -0.28
TRIM3-215ENST00000639856 TMEM229BQ8NBD8 167 aa13.3□□□□□ -0.28
TRIM3-215ENST00000639856 OR8B12Q8NGG6 310 aa13.3□□□□□ -0.28
TRIM3-215ENST00000639856 OR8S1Q8NH09 359 aa13.3□□□□□ -0.28
TRIM3-215ENST00000639856 ZNF385AQ96PM9 386 aaKnown RBP13.3□□□□□ -0.28
TRIM3-215ENST00000639856 FAM173AQ9BQD7 235 aa13.3□□□□□ -0.28
TRIM3-215ENST00000639856 NAA11Q9BSU3 229 aaPredicted RBP13.3□□□□□ -0.28
TRIM3-215ENST00000639856 G3V3Q6 166 aa13.29□□□□□ -0.28
TRIM3-215ENST00000639856 TM4SF5O14894 197 aa13.29□□□□□ -0.28
TRIM3-215ENST00000639856 NKX2-8O15522 239 aa13.29□□□□□ -0.28
TRIM3-215ENST00000639856 FCER2P06734 321 aa13.29□□□□□ -0.28
TRIM3-215ENST00000639856 VSIG10L2P0DP72 767 aa13.29□□□□□ -0.28
TRIM3-215ENST00000639856 HTR2BP41595 481 aa13.29□□□□□ -0.28
TRIM3-215ENST00000639856 CSNK1A1P48729 337 aa13.29□□□□□ -0.28
TRIM3-215ENST00000639856 CSNK2A1P68400 391 aaPredicted RBP13.29□□□□□ -0.28
TRIM3-215ENST00000639856 RAB12Q6IQ22 244 aa13.29□□□□□ -0.28
TRIM3-215ENST00000639856 SULF2Q8IWU5 870 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms