RNA–Protein interactions for RNA: ENST00000637968.1

SCN1A-216, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,614 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-216ENST00000637968 K7EQM0 130 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 IGHA1P01876 353 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 ACRP10323 421 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 MDKP21741 143 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-216ENST00000637968 CCR5P51681 352 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 CNN1P51911 297 aaKnown RBP5.19□□□□□ -1.58
SCN1A-216ENST00000637968 FAM3BP58499 235 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-216ENST00000637968 PLP1P60201 277 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 RPL24P83731 157 aaKnown RBP5.19□□□□□ -1.58
SCN1A-216ENST00000637968 PAX2Q02962 417 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 RBPJQ06330 500 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 TMEM267Q0VDI3 215 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-216ENST00000637968 SPATA45Q537H7 98 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 AADACL3Q5VUY0 350 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 YOD1Q5VVQ6 348 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-216ENST00000637968 KIAA0895LQ68EN5 471 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 SLC35E3Q7Z769 313 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 SERPINA9Q86WD7 417 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 SGPP2Q8IWX5 399 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 OR51L1Q8NGJ5 315 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 OR2Y1Q8NGV0 311 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 OR2AE1Q8NHA4 323 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 LOXL4Q96JB6 756 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 NMES1Q9C002 83 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 SLC5A7Q9GZV3 580 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 NOX4Q9NPH5 578 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 KIR2DL5BA0A0G2JN68 375 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 KIR2DL5BA0A0G2JPC4 375 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 GAGE10A6NGK3 116 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 M0R1X1 148 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 TNFSF15O95150 251 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 OR2T7P0C7T2 308 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 ARAFP10398 606 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 SELPP16109 830 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 TACR1P25103 407 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 THBS2P35442 1172 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 MRPS6P82932 125 aaKnown RBP5.19□□□□□ -1.58
SCN1A-216ENST00000637968 LAMTOR4Q0VGL1 99 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 C18orf21Q32NC0 220 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-216ENST00000637968 TMEM182Q6ZP80 229 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-216ENST00000637968 PLPPR4Q7Z2D5 763 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 TMEM144Q7Z5S9 345 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 KMT5CQ86Y97 462 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 SPNS2Q8IVW8 549 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 KIR2DL5AQ8N109 375 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 ZNF676Q8N7Q3 588 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 GPR148Q8TDV2 347 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 NKD1Q969G9 470 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 VOPP1Q96AW1 172 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 BORCS7Q96B45 105 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 ARRDC3Q96B67 414 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 APIPQ96GX9 242 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 SLC35G5Q96KT7 338 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 SLC6A18Q96N87 628 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 SEMA3CQ99985 751 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 ZFYVE21Q9BQ24 234 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 CHST6Q9GZX3 395 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 G6PC2Q9NQR9 355 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 FUT9Q9Y231 359 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 ST3GAL6Q9Y274 331 aa5.19□□□□□ -1.58
SCN1A-216ENST00000637968 POLR3KQ9Y2Y1 108 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-216ENST00000637968 TJP1Q07157 1748 aa5.18□□□□□ -1.58
SCN1A-216ENST00000637968 GPR137BO60478 399 aa5.18□□□□□ -1.58
SCN1A-216ENST00000637968 CTSVO60911 334 aa5.18□□□□□ -1.58
SCN1A-216ENST00000637968 RCBTB2O95199 551 aa5.18□□□□□ -1.58
SCN1A-216ENST00000637968 CNIH1O95406 144 aa5.18□□□□□ -1.58
SCN1A-216ENST00000637968 CDS2O95674 445 aa5.18□□□□□ -1.58
SCN1A-216ENST00000637968 MAS1P04201 325 aa5.18□□□□□ -1.58
SCN1A-216ENST00000637968 ADH5P11766 374 aa5.18□□□□□ -1.58
SCN1A-216ENST00000637968 CEACAM1P13688 526 aa5.18□□□□□ -1.58
SCN1A-216ENST00000637968 DPP4P27487 766 aa5.18□□□□□ -1.58
SCN1A-216ENST00000637968 PTGER3P43115 390 aa5.18□□□□□ -1.58
SCN1A-216ENST00000637968 RAB9AP51151 201 aa5.18□□□□□ -1.58
SCN1A-216ENST00000637968 MANFP55145 182 aaKnown RBP5.18□□□□□ -1.58
SCN1A-216ENST00000637968 ELLP55199 621 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-216ENST00000637968 RPS20P60866 119 aaKnown RBP5.18□□□□□ -1.58
SCN1A-216ENST00000637968 SMAGPQ0VAQ4 97 aa5.18□□□□□ -1.58
SCN1A-216ENST00000637968 GNMTQ14749 295 aa5.18□□□□□ -1.58
SCN1A-216ENST00000637968 GPNMBQ14956 572 aa5.18□□□□□ -1.58
SCN1A-216ENST00000637968 ALG10BQ5I7T1 473 aa5.18□□□□□ -1.58
SCN1A-216ENST00000637968 TMEM173Q86WV6 379 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-216ENST00000637968 C1orf127Q8N9H9 656 aa5.18□□□□□ -1.58
SCN1A-216ENST00000637968 ZNF485Q8NCK3 441 aa5.18□□□□□ -1.58
SCN1A-216ENST00000637968 OR4K1Q8NGD4 311 aa5.18□□□□□ -1.58
SCN1A-216ENST00000637968 OR4K14Q8NGD5 310 aa5.18□□□□□ -1.58
SCN1A-216ENST00000637968 GPR150Q8NGU9 434 aa5.18□□□□□ -1.58
SCN1A-216ENST00000637968 FNDC9Q8TBE3 224 aa5.18□□□□□ -1.58
SCN1A-216ENST00000637968 MS4A6EQ96DS6 147 aa5.18□□□□□ -1.58
SCN1A-216ENST00000637968 DNAJA3Q96EY1 480 aa5.18□□□□□ -1.58
SCN1A-216ENST00000637968 MS4A8Q9BY19 250 aa5.18□□□□□ -1.58
SCN1A-216ENST00000637968 Q9N2K0 584 aa5.18□□□□□ -1.58
SCN1A-216ENST00000637968 MRPL17Q9NRX2 175 aaKnown RBP5.18□□□□□ -1.58
SCN1A-216ENST00000637968 FBXW11Q9UKB1 542 aa5.18□□□□□ -1.58
SCN1A-216ENST00000637968 CDC42EP3Q9UKI2 254 aa5.18□□□□□ -1.58
SCN1A-216ENST00000637968 ZNF860A6NHJ4 632 aa5.18□□□□□ -1.58
SCN1A-216ENST00000637968 SLC38A8A6NNN8 435 aa5.18□□□□□ -1.58
SCN1A-216ENST00000637968 A8MVM7 634 aa5.18□□□□□ -1.58
SCN1A-216ENST00000637968 SOCS6O14544 535 aa5.18□□□□□ -1.58
SCN1A-216ENST00000637968 DVL2O14641 736 aa5.18□□□□□ -1.58
SCN1A-216ENST00000637968 CDIPTO14735 213 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms