RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 HLA-HP01893 362 aa13.37□□□□□ -0.27
CLN6-219ENST00000637329 INHBBP09529 407 aa13.37□□□□□ -0.27
CLN6-219ENST00000637329 SLC2A1P11166 492 aa13.37□□□□□ -0.27
CLN6-219ENST00000637329 CD79AP11912 226 aa13.37□□□□□ -0.27
CLN6-219ENST00000637329 OPRM1P35372 400 aa13.37□□□□□ -0.27
CLN6-219ENST00000637329 UBE2NP61088 152 aaKnown RBP13.37□□□□□ -0.27
CLN6-219ENST00000637329 RAB1AP62820 205 aa13.37□□□□□ -0.27
CLN6-219ENST00000637329 GABRA6Q16445 453 aa13.37□□□□□ -0.27
CLN6-219ENST00000637329 HIKESHIQ53FT3 197 aa13.37□□□□□ -0.27
CLN6-219ENST00000637329 SFRP5Q5T4F7 317 aa13.37□□□□□ -0.27
CLN6-219ENST00000637329 DDI2Q5TDH0 399 aa13.37□□□□□ -0.27
CLN6-219ENST00000637329 MZT2AQ6P582 158 aa13.37□□□□□ -0.27
CLN6-219ENST00000637329 PARP16Q8N5Y8 322 aa13.37□□□□□ -0.27
CLN6-219ENST00000637329 PLPP7Q8NBV4 271 aa13.37□□□□□ -0.27
CLN6-219ENST00000637329 NAXEQ8NCW5 288 aa13.37□□□□□ -0.27
CLN6-219ENST00000637329 ST6GALNAC3Q8NDV1 305 aa13.37□□□□□ -0.27
CLN6-219ENST00000637329 OR51E1Q8TCB6 317 aa13.37□□□□□ -0.27
CLN6-219ENST00000637329 PPP1R14AQ96A00 147 aa13.37□□□□□ -0.27
CLN6-219ENST00000637329 C10orf35Q96D05 121 aa13.37□□□□□ -0.27
CLN6-219ENST00000637329 WDFY2Q96P53 400 aa13.37□□□□□ -0.27
CLN6-219ENST00000637329 MRI1Q9BV20 369 aa13.37□□□□□ -0.27
CLN6-219ENST00000637329 ZCCHC4Q9H5U6 513 aa13.37□□□□□ -0.27
CLN6-219ENST00000637329 AKIP1Q9NQ31 210 aa13.37□□□□□ -0.27
CLN6-219ENST00000637329 GPR84Q9NQS5 396 aa13.37□□□□□ -0.27
CLN6-219ENST00000637329 ZNF275Q9NSD4 429 aaPredicted RBP13.37□□□□□ -0.27
CLN6-219ENST00000637329 PRRC2CQ9Y520 2896 aaKnown RBP13.36□□□□□ -0.27
CLN6-219ENST00000637329 PHF3Q92576 2039 aaKnown RBP13.36□□□□□ -0.27
CLN6-219ENST00000637329 CIB4A0PJX0 185 aa13.36□□□□□ -0.27
CLN6-219ENST00000637329 ZNF503-AS2A6NEH8 195 aa13.36□□□□□ -0.27
CLN6-219ENST00000637329 MSTNO14793 375 aa13.36□□□□□ -0.27
CLN6-219ENST00000637329 MTRF1O75570 445 aaKnown RBP13.36□□□□□ -0.27
CLN6-219ENST00000637329 RAD51DO75771 328 aa13.36□□□□□ -0.27
CLN6-219ENST00000637329 DBHP09172 617 aa13.36□□□□□ -0.27
CLN6-219ENST00000637329 PATE4P0C8F1 98 aa13.36□□□□□ -0.27
CLN6-219ENST00000637329 IGFBP3P17936 291 aaPredicted RBP13.36□□□□□ -0.27
CLN6-219ENST00000637329 PAX7P23759 505 aa13.36□□□□□ -0.27
CLN6-219ENST00000637329 ETV6P41212 452 aa13.36□□□□□ -0.27
CLN6-219ENST00000637329 PPP3R1P63098 170 aa13.36□□□□□ -0.27
CLN6-219ENST00000637329 STAC2Q6ZMT1 411 aa13.36□□□□□ -0.27
CLN6-219ENST00000637329 LRRTM1Q86UE6 522 aa13.36□□□□□ -0.27
CLN6-219ENST00000637329 NR2C2APQ86WQ0 139 aa13.36□□□□□ -0.27
CLN6-219ENST00000637329 COMMD2Q86X83 199 aa13.36□□□□□ -0.27
CLN6-219ENST00000637329 RPRMLQ8N4K4 120 aa13.36□□□□□ -0.27
CLN6-219ENST00000637329 NKAIN3Q8N8D7 197 aa13.36□□□□□ -0.27
CLN6-219ENST00000637329 C1QTNF5Q9BXJ0 243 aa13.36□□□□□ -0.27
CLN6-219ENST00000637329 NOX3Q9HBY0 568 aa13.36□□□□□ -0.27
CLN6-219ENST00000637329 TLN1Q9Y490 2541 aaKnown RBP13.35□□□□□ -0.27
CLN6-219ENST00000637329 A0A1W2PPK0 400 aa13.35□□□□□ -0.27
CLN6-219ENST00000637329 ANXA2P2A6NMY6 339 aa13.35□□□□□ -0.27
CLN6-219ENST00000637329 CLDN25C9JDP6 229 aa13.35□□□□□ -0.27
CLN6-219ENST00000637329 E9PLN8 166 aa13.35□□□□□ -0.27
CLN6-219ENST00000637329 AIPO00170 330 aa13.35□□□□□ -0.27
CLN6-219ENST00000637329 XRCC2O43543 280 aa13.35□□□□□ -0.27
CLN6-219ENST00000637329 DHRS3O75911 302 aa13.35□□□□□ -0.27
CLN6-219ENST00000637329 LYZL6O75951 148 aa13.35□□□□□ -0.27
CLN6-219ENST00000637329 EPXP11678 715 aa13.35□□□□□ -0.27
CLN6-219ENST00000637329 ZNF20P17024 532 aa13.35□□□□□ -0.27
CLN6-219ENST00000637329 STOMP27105 288 aa13.35□□□□□ -0.27
CLN6-219ENST00000637329 APEX1P27695 318 aaKnown RBP13.35□□□□□ -0.27
CLN6-219ENST00000637329 APLNRP35414 380 aa13.35□□□□□ -0.27
CLN6-219ENST00000637329 PEX19P40855 299 aa13.35□□□□□ -0.27
CLN6-219ENST00000637329 BMXP51813 675 aa13.35□□□□□ -0.27
CLN6-219ENST00000637329 CASP6P55212 293 aa13.35□□□□□ -0.27
CLN6-219ENST00000637329 SCAND1P57086 179 aa13.35□□□□□ -0.27
CLN6-219ENST00000637329 HGFACQ04756 655 aa13.35□□□□□ -0.27
CLN6-219ENST00000637329 ZNF846Q147U1 533 aa13.35□□□□□ -0.27
CLN6-219ENST00000637329 CEP78Q5JTW2 689 aa13.35□□□□□ -0.27
CLN6-219ENST00000637329 COLCA1Q6ZS62 124 aa13.35□□□□□ -0.27
CLN6-219ENST00000637329 SERPINA12Q8IW75 414 aa13.35□□□□□ -0.27
CLN6-219ENST00000637329 CPEB3Q8NE35 698 aaKnown RBP13.35□□□□□ -0.27
CLN6-219ENST00000637329 SLC7A6Q92536 515 aa13.35□□□□□ -0.27
CLN6-219ENST00000637329 VKORC1Q9BQB6 163 aa13.35□□□□□ -0.27
CLN6-219ENST00000637329 OPN3Q9H1Y3 402 aaPredicted RBP13.35□□□□□ -0.27
CLN6-219ENST00000637329 OPA3Q9H6K4 179 aa13.35□□□□□ -0.27
CLN6-219ENST00000637329 PLEKHA1Q9HB21 404 aa13.35□□□□□ -0.27
CLN6-219ENST00000637329 ZNF629Q9UEG4 869 aaPredicted RBP13.35□□□□□ -0.27
CLN6-219ENST00000637329 TINAGQ9UJW2 476 aa13.35□□□□□ -0.27
CLN6-219ENST00000637329 ADAM30Q9UKF2 790 aa13.35□□□□□ -0.27
CLN6-219ENST00000637329 AMDHD2Q9Y303 409 aa13.35□□□□□ -0.27
CLN6-219ENST00000637329 CMAHPQ9Y471 501 aa13.35□□□□□ -0.27
CLN6-219ENST00000637329 V9GYS6 101 aa13.35□□□□□ -0.27
CLN6-219ENST00000637329 TRAV8-7A0A075B6U6 113 aa13.34□□□□□ -0.27
CLN6-219ENST00000637329 SMIM30A4D0T7 59 aa13.34□□□□□ -0.27
CLN6-219ENST00000637329 MEGF11A6BM72 1044 aa13.34□□□□□ -0.27
CLN6-219ENST00000637329 IFITM5A6NNB3 132 aa13.34□□□□□ -0.27
CLN6-219ENST00000637329 TBX1O43435 398 aa13.34□□□□□ -0.27
CLN6-219ENST00000637329 NCR1O76036 304 aa13.34□□□□□ -0.27
CLN6-219ENST00000637329 SERPINA5P05154 406 aa13.34□□□□□ -0.27
CLN6-219ENST00000637329 THBS2P35442 1172 aa13.34□□□□□ -0.27
CLN6-219ENST00000637329 MAGEB1P43366 347 aa13.34□□□□□ -0.27
CLN6-219ENST00000637329 CAV3P56539 151 aa13.34□□□□□ -0.27
CLN6-219ENST00000637329 OR10A3P58181 314 aa13.34□□□□□ -0.27
CLN6-219ENST00000637329 SNAI3Q3KNW1 292 aa13.34□□□□□ -0.27
CLN6-219ENST00000637329 C4orf17Q53FE4 359 aa13.34□□□□□ -0.27
CLN6-219ENST00000637329 TMEM211Q6ICI0 200 aa13.34□□□□□ -0.27
CLN6-219ENST00000637329 PGAP1Q75T13 922 aa13.34□□□□□ -0.27
CLN6-219ENST00000637329 MRGPRGQ86SM5 289 aa13.34□□□□□ -0.27
CLN6-219ENST00000637329 MDP1Q86V88 176 aa13.34□□□□□ -0.27
CLN6-219ENST00000637329 MFSD4AQ8N468 514 aa13.34□□□□□ -0.27
CLN6-219ENST00000637329 FAM169BQ8N8A8 192 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms