RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 EMP2P54851 167 aa13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 SLC37A1P57057 533 aa13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 SQSTM1Q13501 440 aa13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 ZNF248Q8NDW4 579 aa13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 SLC26A10Q8NG04 563 aa13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 ST7LQ8TDW4 575 aa13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 HIST1H2BAQ96A08 127 aa13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 TMEM230Q96A57 120 aa13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 ARL5BQ96KC2 179 aa13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 ADOQ96SZ5 270 aa13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 GABRG3Q99928 467 aa13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 SEBOXQ9HB31 216 aaPredicted RBP13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 METTL1Q9UBP6 276 aaKnown RBP13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 A8MVM7 634 aa13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 PLPP3O14495 311 aa13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 PRKNO60260 465 aaPredicted RBP13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 ADAP1O75689 374 aa13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 NUDT14O95848 222 aa13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 POLR2HP52434 150 aaKnown RBP13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 RBM39Q14498 530 aaKnown RBP13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 SLC9A3R2Q15599 337 aa13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 TMEM196Q5HYL7 178 aa13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 ZNF600Q6ZNG1 722 aa13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 PEG10Q86TG7 708 aaKnown RBP13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 NUBPLQ8TB37 319 aa13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 GPBAR1Q8TDU6 330 aa13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 SLC37A2Q8TED4 501 aa13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 KLHDC3Q9BQ90 382 aa13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 OR51M1Q9H341 326 aa13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 NIT2Q9NQR4 276 aa13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 DHCR7Q9UBM7 475 aaKnown RBP13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 CACFD1Q9UGQ2 172 aa13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 KIF26BQ2KJY2 2108 aa13.19□□□□□ -0.3
CACNA1A-220ENST00000635988 A0A1W2PQD3 144 aa13.18□□□□□ -0.3
CACNA1A-220ENST00000635988 ICOSLGO75144 302 aa13.18□□□□□ -0.3
CACNA1A-220ENST00000635988 NPIPB7O75200 414 aa13.18□□□□□ -0.3
CACNA1A-220ENST00000635988 TNFP01375 233 aa13.18□□□□□ -0.3
CACNA1A-220ENST00000635988 RCC1P18754 421 aaPredicted RBP13.18□□□□□ -0.3
CACNA1A-220ENST00000635988 AGAP20933 346 aa13.18□□□□□ -0.3
CACNA1A-220ENST00000635988 CPT2P23786 658 aa13.18□□□□□ -0.3
CACNA1A-220ENST00000635988 SLC26A5P58743 744 aa13.18□□□□□ -0.3
CACNA1A-220ENST00000635988 FAM209BQ5JX69 171 aa13.18□□□□□ -0.3
CACNA1A-220ENST00000635988 C1orf140Q5VVS0 124 aa13.18□□□□□ -0.3
CACNA1A-220ENST00000635988 DHRS11Q6UWP2 260 aa13.18□□□□□ -0.3
CACNA1A-220ENST00000635988 C5orf46Q6UWT4 87 aa13.18□□□□□ -0.3
CACNA1A-220ENST00000635988 Q7L0L9 218 aa13.18□□□□□ -0.3
CACNA1A-220ENST00000635988 SLC16A13Q7RTY0 426 aa13.18□□□□□ -0.3
CACNA1A-220ENST00000635988 AVL9Q8NBF6 648 aa13.18□□□□□ -0.3
CACNA1A-220ENST00000635988 POC1AQ8NBT0 407 aa13.18□□□□□ -0.3
CACNA1A-220ENST00000635988 ROBO4Q8WZ75 1007 aa13.18□□□□□ -0.3
CACNA1A-220ENST00000635988 LHX6Q9UPM6 363 aa13.18□□□□□ -0.3
CACNA1A-220ENST00000635988 FIGNL2A6NMB9 653 aa13.18□□□□□ -0.3
CACNA1A-220ENST00000635988 SYT7O43581 403 aa13.18□□□□□ -0.3
CACNA1A-220ENST00000635988 EIF1BO60739 113 aaKnown RBP13.18□□□□□ -0.3
CACNA1A-220ENST00000635988 MPZL1O95297 269 aa13.18□□□□□ -0.3
CACNA1A-220ENST00000635988 GAPDHP04406 335 aaKnown RBP13.18□□□□□ -0.3
CACNA1A-220ENST00000635988 ZNF44P15621 663 aa13.18□□□□□ -0.3
CACNA1A-220ENST00000635988 NME2P22392 152 aa13.18□□□□□ -0.3
CACNA1A-220ENST00000635988 EIF1P41567 113 aaKnown RBP13.18□□□□□ -0.3
CACNA1A-220ENST00000635988 RAB32Q13637 225 aa13.18□□□□□ -0.3
CACNA1A-220ENST00000635988 NSUN5P2Q63ZY6 315 aa13.18□□□□□ -0.3
CACNA1A-220ENST00000635988 RPL7L1Q6DKI1 246 aaKnown RBP13.18□□□□□ -0.3
CACNA1A-220ENST00000635988 SLC29A4Q7RTT9 530 aa13.18□□□□□ -0.3
CACNA1A-220ENST00000635988 COMMD1Q8N668 190 aa13.18□□□□□ -0.3
CACNA1A-220ENST00000635988 MMABQ96EY8 250 aaPredicted RBP13.18□□□□□ -0.3
CACNA1A-220ENST00000635988 CLCC1Q96S66 551 aa13.18□□□□□ -0.3
CACNA1A-220ENST00000635988 TMED7-TICAM2A0A0A6YYA0 188 aa13.17□□□□□ -0.3
CACNA1A-220ENST00000635988 FAM157AC9JC47 383 aa13.17□□□□□ -0.3
CACNA1A-220ENST00000635988 JTBO76095 146 aa13.17□□□□□ -0.3
CACNA1A-220ENST00000635988 AHSA1O95433 338 aa13.17□□□□□ -0.3
CACNA1A-220ENST00000635988 SERPINA5P05154 406 aa13.17□□□□□ -0.3
CACNA1A-220ENST00000635988 IL12BP29460 328 aa13.17□□□□□ -0.3
CACNA1A-220ENST00000635988 CSNK1EP49674 416 aaKnown RBP13.17□□□□□ -0.3
CACNA1A-220ENST00000635988 NPY4RP50391 375 aa13.17□□□□□ -0.3
CACNA1A-220ENST00000635988 IL15RAQ13261 267 aa13.17□□□□□ -0.3
CACNA1A-220ENST00000635988 KLHL24Q6TFL4 600 aa13.17□□□□□ -0.3
CACNA1A-220ENST00000635988 ANGPTL5Q86XS5 388 aa13.17□□□□□ -0.3
CACNA1A-220ENST00000635988 ZNF101Q8IZC7 436 aa13.17□□□□□ -0.3
CACNA1A-220ENST00000635988 OR5H2Q8NGV7 314 aa13.17□□□□□ -0.3
CACNA1A-220ENST00000635988 RAB3CQ96E17 227 aa13.17□□□□□ -0.3
CACNA1A-220ENST00000635988 DNAJA3Q96EY1 480 aa13.17□□□□□ -0.3
CACNA1A-220ENST00000635988 TAAR9Q96RI9 348 aa13.17□□□□□ -0.3
CACNA1A-220ENST00000635988 CRISPLD2Q9H0B8 497 aa13.17□□□□□ -0.3
CACNA1A-220ENST00000635988 RPS10P5Q9NQ39 176 aa13.17□□□□□ -0.3
CACNA1A-220ENST00000635988 C5orf67F2Z3F1 127 aa13.17□□□□□ -0.3
CACNA1A-220ENST00000635988 GMFGO60234 142 aa13.17□□□□□ -0.3
CACNA1A-220ENST00000635988 HIST1H1DP16402 221 aaKnown RBP13.17□□□□□ -0.3
CACNA1A-220ENST00000635988 ZNF93P35789 620 aaPredicted RBP13.17□□□□□ -0.3
CACNA1A-220ENST00000635988 HAAOP46952 286 aa13.17□□□□□ -0.3
CACNA1A-220ENST00000635988 PPT1P50897 306 aa13.17□□□□□ -0.3
CACNA1A-220ENST00000635988 DCAF7P61962 342 aa13.17□□□□□ -0.3
CACNA1A-220ENST00000635988 ZNF529Q6P280 563 aa13.17□□□□□ -0.3
CACNA1A-220ENST00000635988 COX15Q7KZN9 410 aa13.17□□□□□ -0.3
CACNA1A-220ENST00000635988 LYPD6BQ8NI32 183 aa13.17□□□□□ -0.3
CACNA1A-220ENST00000635988 KCNG3Q8TAE7 436 aa13.17□□□□□ -0.3
CACNA1A-220ENST00000635988 PTPMT1Q8WUK0 201 aaPredicted RBP13.17□□□□□ -0.3
CACNA1A-220ENST00000635988 RNF133Q8WVZ7 376 aa13.17□□□□□ -0.3
CACNA1A-220ENST00000635988 ZC3H10Q96K80 434 aaKnown RBP13.17□□□□□ -0.3
CACNA1A-220ENST00000635988 OR10C1Q96KK4 312 aa13.17□□□□□ -0.3
CACNA1A-220ENST00000635988 OCSTAMPQ9BR26 566 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms