RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 KIR3DL3Q8N743 410 aa2.48□□□□□ -2.01
PSPC1-208ENST00000635562 ZNF676Q8N7Q3 588 aa2.48□□□□□ -2.01
PSPC1-208ENST00000635562 C4orf32Q8N8J7 132 aa2.48□□□□□ -2.01
PSPC1-208ENST00000635562 ACOT4Q8N9L9 421 aa2.48□□□□□ -2.01
PSPC1-208ENST00000635562 OR4D9Q8NGE8 314 aa2.48□□□□□ -2.01
PSPC1-208ENST00000635562 AENQ8WTP8 325 aaKnown RBP2.48□□□□□ -2.01
PSPC1-208ENST00000635562 TMEM255BQ8WV15 326 aa2.48□□□□□ -2.01
PSPC1-208ENST00000635562 HPSE2Q8WWQ2 592 aa2.48□□□□□ -2.01
PSPC1-208ENST00000635562 DLX4Q92988 240 aaPredicted RBP2.48□□□□□ -2.01
PSPC1-208ENST00000635562 ART4Q93070 314 aa2.48□□□□□ -2.01
PSPC1-208ENST00000635562 PNPLA2Q96AD5 504 aa2.48□□□□□ -2.01
PSPC1-208ENST00000635562 ZHX1-C8orf76Q96EF9 292 aa2.48□□□□□ -2.01
PSPC1-208ENST00000635562 CPNE2Q96FN4 548 aaPredicted RBP2.48□□□□□ -2.01
PSPC1-208ENST00000635562 TMEM80Q96HE8 168 aa2.48□□□□□ -2.01
PSPC1-208ENST00000635562 PCED1BQ96HM7 432 aa2.48□□□□□ -2.01
PSPC1-208ENST00000635562 ZNF488Q96MN9 340 aa2.48□□□□□ -2.01
PSPC1-208ENST00000635562 CLCC1Q96S66 551 aa2.48□□□□□ -2.01
PSPC1-208ENST00000635562 DOK1Q99704 481 aa2.48□□□□□ -2.01
PSPC1-208ENST00000635562 EBF4Q9BQW3 602 aa2.48□□□□□ -2.01
PSPC1-208ENST00000635562 TMEM208Q9BTX3 173 aa2.48□□□□□ -2.01
PSPC1-208ENST00000635562 GGACTQ9BVM4 153 aa2.48□□□□□ -2.01
PSPC1-208ENST00000635562 FAIM2Q9BWQ8 316 aa2.48□□□□□ -2.01
PSPC1-208ENST00000635562 UGT2B28Q9BY64 529 aa2.48□□□□□ -2.01
PSPC1-208ENST00000635562 NXF2Q9GZY0 626 aaKnown RBP2.48□□□□□ -2.01
PSPC1-208ENST00000635562 DSN1Q9H410 356 aa2.48□□□□□ -2.01
PSPC1-208ENST00000635562 RNF121Q9H920 327 aa2.48□□□□□ -2.01
PSPC1-208ENST00000635562 ZBTB20Q9HC78 741 aaPredicted RBP2.48□□□□□ -2.01
PSPC1-208ENST00000635562 AMBNQ9NP70 447 aa2.48□□□□□ -2.01
PSPC1-208ENST00000635562 MIEF1Q9NQG6 463 aa2.48□□□□□ -2.01
PSPC1-208ENST00000635562 BIN3Q9NQY0 253 aa2.48□□□□□ -2.01
PSPC1-208ENST00000635562 AGPAT4Q9NRZ5 378 aa2.48□□□□□ -2.01
PSPC1-208ENST00000635562 MCUBQ9NWR8 336 aa2.48□□□□□ -2.01
PSPC1-208ENST00000635562 DDIT4Q9NX09 232 aa2.48□□□□□ -2.01
PSPC1-208ENST00000635562 THAP10Q9P2Z0 257 aaPredicted RBP2.48□□□□□ -2.01
PSPC1-208ENST00000635562 LSM7Q9UK45 103 aaKnown RBP2.48□□□□□ -2.01
PSPC1-208ENST00000635562 ELF5Q9UKW6 265 aaPredicted RBP2.48□□□□□ -2.01
PSPC1-208ENST00000635562 SAMD4AQ9UPU9 718 aaKnown RBP2.48□□□□□ -2.01
PSPC1-208ENST00000635562 VDAC3Q9Y277 283 aa2.48□□□□□ -2.01
PSPC1-208ENST00000635562 SLC35A3Q9Y2D2 325 aa2.48□□□□□ -2.01
PSPC1-208ENST00000635562 RPL36Q9Y3U8 105 aaKnown RBP2.48□□□□□ -2.01
PSPC1-208ENST00000635562 HSPB11Q9Y547 144 aa2.48□□□□□ -2.01
PSPC1-208ENST00000635562 NCOA1Q15788 1441 aa2.48□□□□□ -2.01
PSPC1-208ENST00000635562 CD109Q6YHK3 1445 aa2.48□□□□□ -2.01
PSPC1-208ENST00000635562 AKAP12Q02952 1782 aa2.48□□□□□ -2.01
PSPC1-208ENST00000635562 EIF4G3O43432 1585 aaKnown RBP2.48□□□□□ -2.01
PSPC1-208ENST00000635562 MYO5BQ9ULV0 1848 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 MYH2Q9UKX2 1941 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 A0A1B0GTH9 108 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 A0A1B0GUV1 79 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 MED19A0JLT2 244 aaPredicted RBP2.47□□□□□ -2.01
PSPC1-208ENST00000635562 IGSF23A1L1A6 192 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 FAM231BA6NCW3 169 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 TRABD2BA6NFA1 517 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 CYSRT1A8MQ03 144 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 FAM25AB3EWG3 89 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 FAM25CB3EWG5 89 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 FAM25GB3EWG6 89 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 LOC110117498-PIK3R3F6TDL0 507 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 GPR31O00270 319 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 HSD17B6O14756 317 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 RGS16O15492 202 aaPredicted RBP2.47□□□□□ -2.01
PSPC1-208ENST00000635562 PHF1O43189 567 aaPredicted RBP2.47□□□□□ -2.01
PSPC1-208ENST00000635562 PLIN3O60664 434 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 ENTPD6O75354 484 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 CLDN11O75508 207 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 EIF3GO75821 320 aaKnown RBP eCLIP2.47□□□□□ -2.01
PSPC1-208ENST00000635562 OR2J2O76002 312 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 OR7A10O76100 309 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 VENTXO95231 258 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 IGSF6O95976 241 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 IFNA1P01562 189 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 HBE1P02100 147 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 APOHP02749 345 aaPredicted RBP2.47□□□□□ -2.01
PSPC1-208ENST00000635562 CATP04040 527 aaKnown RBP2.47□□□□□ -2.01
PSPC1-208ENST00000635562 RLN2P04090 185 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 OR10J4P0C629 311 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 LIPCP11150 499 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 FGF3P11487 239 aaPredicted RBP2.47□□□□□ -2.01
PSPC1-208ENST00000635562 GP1BBP13224 206 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 IGFBP3P17936 291 aaPredicted RBP2.47□□□□□ -2.01
PSPC1-208ENST00000635562 PVALBP20472 110 aaPredicted RBP2.47□□□□□ -2.01
PSPC1-208ENST00000635562 CXCR1P25024 350 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 HTR1DP28221 377 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 PHBP35232 272 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 RFC3P40938 356 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 SULT1A1P50225 295 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 SULT1A2P50226 295 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 EMDP50402 254 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 EFNA3P52797 238 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 AQP5P55064 265 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 PAX9P55771 341 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 ZNF121P58317 390 aaPredicted RBP2.47□□□□□ -2.01
PSPC1-208ENST00000635562 DNAJB13P59910 316 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 PITX1P78337 314 aaPredicted RBP2.47□□□□□ -2.01
PSPC1-208ENST00000635562 RPL24P83731 157 aaKnown RBP2.47□□□□□ -2.01
PSPC1-208ENST00000635562 HPCAP84074 193 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 GTF2BQ00403 316 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 CD164Q04900 197 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 RIPPLY1Q0D2K3 151 aa2.47□□□□□ -2.01
PSPC1-208ENST00000635562 CNTN1Q12860 1018 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms