RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 OTX1P32242 354 aaPredicted RBP13.2□□□□□ -0.3
LINC00339-209ENST00000635450 CRYBB2P43320 205 aa13.2□□□□□ -0.3
LINC00339-209ENST00000635450 TMEM33P57088 247 aa13.2□□□□□ -0.3
LINC00339-209ENST00000635450 TNFAIP6P98066 277 aaPredicted RBP13.2□□□□□ -0.3
LINC00339-209ENST00000635450 HFEQ30201 348 aa13.2□□□□□ -0.3
LINC00339-209ENST00000635450 SPRNQ5BIV9 151 aa13.2□□□□□ -0.3
LINC00339-209ENST00000635450 AVPI1Q5T686 147 aa13.2□□□□□ -0.3
LINC00339-209ENST00000635450 OR2T2Q6IF00 324 aa13.2□□□□□ -0.3
LINC00339-209ENST00000635450 USP51Q70EK9 711 aa13.2□□□□□ -0.3
LINC00339-209ENST00000635450 PGAP1Q75T13 922 aa13.2□□□□□ -0.3
LINC00339-209ENST00000635450 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.2□□□□□ -0.3
LINC00339-209ENST00000635450 TCEANCQ8N8B7 351 aa13.2□□□□□ -0.3
LINC00339-209ENST00000635450 ZNF454Q8N9F8 522 aa13.2□□□□□ -0.3
LINC00339-209ENST00000635450 BBS1Q8NFJ9 593 aa13.2□□□□□ -0.3
LINC00339-209ENST00000635450 THEM6Q8WUY1 208 aa13.2□□□□□ -0.3
LINC00339-209ENST00000635450 ABHD6Q9BV23 337 aa13.2□□□□□ -0.3
LINC00339-209ENST00000635450 RIBC2Q9H4K1 309 aa13.2□□□□□ -0.3
LINC00339-209ENST00000635450 SP140LQ9H930 580 aa13.2□□□□□ -0.3
LINC00339-209ENST00000635450 PPIHO43447 177 aaKnown RBP13.19□□□□□ -0.3
LINC00339-209ENST00000635450 PRKYO43930 277 aa13.19□□□□□ -0.3
LINC00339-209ENST00000635450 CD55P08174 381 aa13.19□□□□□ -0.3
LINC00339-209ENST00000635450 H2BFMP0C1H6 154 aa13.19□□□□□ -0.3
LINC00339-209ENST00000635450 TNFRSF1AP19438 455 aa13.19□□□□□ -0.3
LINC00339-209ENST00000635450 EPHA2P29317 976 aa13.19□□□□□ -0.3
LINC00339-209ENST00000635450 NAA10P41227 235 aaPredicted RBP13.19□□□□□ -0.3
LINC00339-209ENST00000635450 CX3CR1P49238 355 aa13.19□□□□□ -0.3
LINC00339-209ENST00000635450 CDK5R2Q13319 367 aa13.19□□□□□ -0.3
LINC00339-209ENST00000635450 C12orf73Q69YU5 71 aa13.19□□□□□ -0.3
LINC00339-209ENST00000635450 RHOUQ7L0Q8 258 aa13.19□□□□□ -0.3
LINC00339-209ENST00000635450 MRPL21Q7Z2W9 205 aaKnown RBP13.19□□□□□ -0.3
LINC00339-209ENST00000635450 OR8G5Q8NG78 346 aa13.19□□□□□ -0.3
LINC00339-209ENST00000635450 OR2Z1Q8NG97 314 aa13.19□□□□□ -0.3
LINC00339-209ENST00000635450 OR13G1Q8NGZ3 307 aa13.19□□□□□ -0.3
LINC00339-209ENST00000635450 OTOSQ8NHW6 89 aa13.19□□□□□ -0.3
LINC00339-209ENST00000635450 TMEM163Q8TC26 289 aa13.19□□□□□ -0.3
LINC00339-209ENST00000635450 RNF133Q8WVZ7 376 aa13.19□□□□□ -0.3
LINC00339-209ENST00000635450 TEAD3Q99594 435 aa13.19□□□□□ -0.3
LINC00339-209ENST00000635450 GABARAPL3Q9BY60 117 aa13.19□□□□□ -0.3
LINC00339-209ENST00000635450 S100A14Q9HCY8 104 aa13.19□□□□□ -0.3
LINC00339-209ENST00000635450 LAMP5Q9UJQ1 280 aa13.19□□□□□ -0.3
LINC00339-209ENST00000635450 N6AMT1Q9Y5N5 214 aa13.19□□□□□ -0.3
LINC00339-209ENST00000635450 IQCF6A8MYZ5 107 aa13.18□□□□□ -0.3
LINC00339-209ENST00000635450 ANXA2P07355 339 aaKnown RBP13.18□□□□□ -0.3
LINC00339-209ENST00000635450 HNF1AP20823 631 aa13.18□□□□□ -0.3
LINC00339-209ENST00000635450 RAD23AP54725 363 aa13.18□□□□□ -0.3
LINC00339-209ENST00000635450 LMO4P61968 165 aa13.18□□□□□ -0.3
LINC00339-209ENST00000635450 SLC3A1Q07837 685 aa13.18□□□□□ -0.3
LINC00339-209ENST00000635450 GK2Q14410 553 aaPredicted RBP13.18□□□□□ -0.3
LINC00339-209ENST00000635450 SNAI3Q3KNW1 292 aa13.18□□□□□ -0.3
LINC00339-209ENST00000635450 NXNL2Q5VZ03 156 aa13.18□□□□□ -0.3
LINC00339-209ENST00000635450 SLC16A9Q7RTY1 509 aa13.18□□□□□ -0.3
LINC00339-209ENST00000635450 STMN2Q93045 179 aa13.18□□□□□ -0.3
LINC00339-209ENST00000635450 TIMD4Q96H15 378 aa13.18□□□□□ -0.3
LINC00339-209ENST00000635450 IL4I1Q96RQ9 567 aa13.18□□□□□ -0.3
LINC00339-209ENST00000635450 C19orf24Q9BVV8 132 aa13.18□□□□□ -0.3
LINC00339-209ENST00000635450 SLC22A31A6NKX4 558 aa13.17□□□□□ -0.3
LINC00339-209ENST00000635450 CLDN25C9JDP6 229 aa13.17□□□□□ -0.3
LINC00339-209ENST00000635450 EI24O14681 340 aa13.17□□□□□ -0.3
LINC00339-209ENST00000635450 TBX1O43435 398 aa13.17□□□□□ -0.3
LINC00339-209ENST00000635450 XRCC2O43543 280 aa13.17□□□□□ -0.3
LINC00339-209ENST00000635450 MRPL3P09001 348 aaKnown RBP13.17□□□□□ -0.3
LINC00339-209ENST00000635450 SLC2A1P11166 492 aa13.17□□□□□ -0.3
LINC00339-209ENST00000635450 ALDH3A2P51648 485 aa13.17□□□□□ -0.3
LINC00339-209ENST00000635450 DVL1P1P54792 670 aaPredicted RBP13.17□□□□□ -0.3
LINC00339-209ENST00000635450 CDC42P60953 191 aa13.17□□□□□ -0.3
LINC00339-209ENST00000635450 MVKQ03426 396 aa13.17□□□□□ -0.3
LINC00339-209ENST00000635450 KCTD18Q6PI47 426 aaPredicted RBP13.17□□□□□ -0.3
LINC00339-209ENST00000635450 Q6ZR03 302 aa13.17□□□□□ -0.3
LINC00339-209ENST00000635450 MEPCEQ7L2J0 689 aaKnown RBP13.17□□□□□ -0.3
LINC00339-209ENST00000635450 ZNF771Q7L3S4 317 aaPredicted RBP13.17□□□□□ -0.3
LINC00339-209ENST00000635450 GID4Q8IVV7 300 aa13.17□□□□□ -0.3
LINC00339-209ENST00000635450 BHLHE23Q8NDY6 225 aa13.17□□□□□ -0.3
LINC00339-209ENST00000635450 SPRYD4Q8WW59 207 aaPredicted RBP13.17□□□□□ -0.3
LINC00339-209ENST00000635450 CCL17Q92583 94 aa13.17□□□□□ -0.3
LINC00339-209ENST00000635450 C9orf16Q9BUW7 83 aa13.17□□□□□ -0.3
LINC00339-209ENST00000635450 YIPF3Q9GZM5 350 aa13.17□□□□□ -0.3
LINC00339-209ENST00000635450 OPA3Q9H6K4 179 aa13.17□□□□□ -0.3
LINC00339-209ENST00000635450 TMEM100Q9NV29 134 aa13.17□□□□□ -0.3
LINC00339-209ENST00000635450 DCAF16Q9NXF7 216 aa13.17□□□□□ -0.3
LINC00339-209ENST00000635450 USE1Q9NZ43 259 aa13.17□□□□□ -0.3
LINC00339-209ENST00000635450 IL19Q9UHD0 177 aa13.17□□□□□ -0.3
LINC00339-209ENST00000635450 CCDC182A6NF36 153 aa13.16□□□□□ -0.3
LINC00339-209ENST00000635450 GGT3PA6NGU5 568 aa13.16□□□□□ -0.3
LINC00339-209ENST00000635450 M0R129 80 aa13.16□□□□□ -0.3
LINC00339-209ENST00000635450 BAG2O95816 211 aa13.16□□□□□ -0.3
LINC00339-209ENST00000635450 ALPLP05186 524 aa13.16□□□□□ -0.3
LINC00339-209ENST00000635450 POLR2IP36954 125 aaKnown RBP13.16□□□□□ -0.3
LINC00339-209ENST00000635450 OPRL1P41146 370 aa13.16□□□□□ -0.3
LINC00339-209ENST00000635450 TIGD6Q17RP2 521 aa13.16□□□□□ -0.3
LINC00339-209ENST00000635450 GLYATL3Q5SZD4 288 aa13.16□□□□□ -0.3
LINC00339-209ENST00000635450 KRT77Q7Z794 578 aa13.16□□□□□ -0.3
LINC00339-209ENST00000635450 PEG10Q86TG7 708 aaKnown RBP13.16□□□□□ -0.3
LINC00339-209ENST00000635450 PQLC1Q8N2U9 271 aa13.16□□□□□ -0.3
LINC00339-209ENST00000635450 OR2AE1Q8NHA4 323 aa13.16□□□□□ -0.3
LINC00339-209ENST00000635450 ITLN1Q8WWA0 313 aa13.16□□□□□ -0.3
LINC00339-209ENST00000635450 RAB1CQ92928 201 aa13.16□□□□□ -0.3
LINC00339-209ENST00000635450 AMELYQ99218 206 aa13.16□□□□□ -0.3
LINC00339-209ENST00000635450 CNN2Q99439 309 aaKnown RBP13.16□□□□□ -0.3
LINC00339-209ENST00000635450 SLC30A2Q9BRI3 323 aa13.16□□□□□ -0.3
LINC00339-209ENST00000635450 NIPAL2Q9H841 368 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms