RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 SRA1Q9HD15 236 aaKnown RBP10.61□□□□□ -0.71
LINC00339-206ENST00000634451 SAR1AQ9NR31 198 aa10.61□□□□□ -0.71
LINC00339-206ENST00000634451 ATPIF1Q9UII2 106 aa10.61□□□□□ -0.71
LINC00339-206ENST00000634451 B9D1Q9UPM9 204 aa10.61□□□□□ -0.71
LINC00339-206ENST00000634451 POMT1Q9Y6A1 747 aa10.61□□□□□ -0.71
LINC00339-206ENST00000634451 NBEAL2Q6ZNJ1 2754 aa10.6□□□□□ -0.71
LINC00339-206ENST00000634451 J3QW42 95 aa10.6□□□□□ -0.71
LINC00339-206ENST00000634451 CXCR6O00574 342 aa10.6□□□□□ -0.71
LINC00339-206ENST00000634451 DVL1O14640 695 aa10.6□□□□□ -0.71
LINC00339-206ENST00000634451 SERPINA1P01009 418 aa10.6□□□□□ -0.71
LINC00339-206ENST00000634451 SELLP14151 372 aa10.6□□□□□ -0.71
LINC00339-206ENST00000634451 CPT2P23786 658 aa10.6□□□□□ -0.71
LINC00339-206ENST00000634451 GGT2P36268 569 aa10.6□□□□□ -0.71
LINC00339-206ENST00000634451 ZNF92Q03936 586 aa10.6□□□□□ -0.71
LINC00339-206ENST00000634451 LIPEQ05469 1076 aa10.6□□□□□ -0.71
LINC00339-206ENST00000634451 EGR3Q06889 387 aa10.6□□□□□ -0.71
LINC00339-206ENST00000634451 TRAP1Q12931 704 aaKnown RBP10.6□□□□□ -0.71
LINC00339-206ENST00000634451 OR8G1Q15617 311 aa10.6□□□□□ -0.71
LINC00339-206ENST00000634451 ANKDD1AQ495B1 522 aa10.6□□□□□ -0.71
LINC00339-206ENST00000634451 IFI44LQ53G44 452 aa10.6□□□□□ -0.71
LINC00339-206ENST00000634451 METTL11BQ5VVY1 283 aa10.6□□□□□ -0.71
LINC00339-206ENST00000634451 BTN2A1Q7KYR7 527 aa10.6□□□□□ -0.71
LINC00339-206ENST00000634451 VMO1Q7Z5L0 202 aa10.6□□□□□ -0.71
LINC00339-206ENST00000634451 WDR86Q86TI4 376 aa10.6□□□□□ -0.71
LINC00339-206ENST00000634451 SLC15A3Q8IY34 581 aa10.6□□□□□ -0.71
LINC00339-206ENST00000634451 RNF113BQ8IZP6 322 aaKnown RBP10.6□□□□□ -0.71
LINC00339-206ENST00000634451 GCSAMQ8N6F7 178 aa10.6□□□□□ -0.71
LINC00339-206ENST00000634451 C11orf44Q8N8P7 122 aa10.6□□□□□ -0.71
LINC00339-206ENST00000634451 ZSCAN4Q8NAM6 433 aaPredicted RBP10.6□□□□□ -0.71
LINC00339-206ENST00000634451 SCCPDHQ8NBX0 429 aa10.6□□□□□ -0.71
LINC00339-206ENST00000634451 GJC3Q8NFK1 279 aa10.6□□□□□ -0.71
LINC00339-206ENST00000634451 ZNRF4Q8WWF5 429 aa10.6□□□□□ -0.71
LINC00339-206ENST00000634451 MAP6Q96JE9 813 aa10.6□□□□□ -0.71
LINC00339-206ENST00000634451 PITX2Q99697 317 aa10.6□□□□□ -0.71
LINC00339-206ENST00000634451 ADAT1Q9BUB4 502 aaKnown RBP10.6□□□□□ -0.71
LINC00339-206ENST00000634451 HCAR1Q9BXC0 346 aa10.6□□□□□ -0.71
LINC00339-206ENST00000634451 SIRT7Q9NRC8 400 aa10.6□□□□□ -0.71
LINC00339-206ENST00000634451 MRPL22Q9NWU5 206 aaKnown RBP10.6□□□□□ -0.71
LINC00339-206ENST00000634451 C1orf123Q9NWV4 160 aa10.6□□□□□ -0.71
LINC00339-206ENST00000634451 ERVK-18Q9QC07 812 aa10.6□□□□□ -0.71
LINC00339-206ENST00000634451 RNF7Q9UBF6 113 aa10.6□□□□□ -0.71
LINC00339-206ENST00000634451 ZNF816-ZNF321PA0A0X1KG74 233 aa10.59□□□□□ -0.71
LINC00339-206ENST00000634451 HTR3EA5X5Y0 456 aa10.59□□□□□ -0.71
LINC00339-206ENST00000634451 OOEPA6NGQ2 149 aa10.59□□□□□ -0.71
LINC00339-206ENST00000634451 CD300LBA8K4G0 201 aa10.59□□□□□ -0.71
LINC00339-206ENST00000634451 NME4O00746 187 aa10.59□□□□□ -0.71
LINC00339-206ENST00000634451 AHCYL1O43865 530 aa10.59□□□□□ -0.71
LINC00339-206ENST00000634451 TXNDC12O95881 172 aa10.59□□□□□ -0.71
LINC00339-206ENST00000634451 GRPP07492 148 aa10.59□□□□□ -0.71
LINC00339-206ENST00000634451 SLC2A1P11166 492 aa10.59□□□□□ -0.71
LINC00339-206ENST00000634451 PAX6P26367 422 aa10.59□□□□□ -0.71
LINC00339-206ENST00000634451 MDH1P40925 334 aaKnown RBP10.59□□□□□ -0.71
LINC00339-206ENST00000634451 PDCD1Q15116 288 aa10.59□□□□□ -0.71
LINC00339-206ENST00000634451 BEAN1Q3B7T3 259 aa10.59□□□□□ -0.71
LINC00339-206ENST00000634451 COQ5Q5HYK3 327 aa10.59□□□□□ -0.71
LINC00339-206ENST00000634451 FGD3Q5JSP0 725 aa10.59□□□□□ -0.71
LINC00339-206ENST00000634451 GLYATL3Q5SZD4 288 aa10.59□□□□□ -0.71
LINC00339-206ENST00000634451 GPR139Q6DWJ6 353 aa10.59□□□□□ -0.71
LINC00339-206ENST00000634451 Q6ZPA2 131 aa10.59□□□□□ -0.71
LINC00339-206ENST00000634451 FKBP9P1Q75LS8 142 aa10.59□□□□□ -0.71
LINC00339-206ENST00000634451 CBLL1Q75N03 491 aa10.59□□□□□ -0.71
LINC00339-206ENST00000634451 PGAP1Q75T13 922 aa10.59□□□□□ -0.71
LINC00339-206ENST00000634451 LDLRAD3Q86YD5 345 aa10.59□□□□□ -0.71
LINC00339-206ENST00000634451 FAM216BQ8N7L0 139 aa10.59□□□□□ -0.71
LINC00339-206ENST00000634451 OR4K13Q8NH42 304 aa10.59□□□□□ -0.71
LINC00339-206ENST00000634451 OR52J3Q8NH60 311 aa10.59□□□□□ -0.71
LINC00339-206ENST00000634451 TBC1D15Q8TC07 691 aa10.59□□□□□ -0.71
LINC00339-206ENST00000634451 C17orf50Q8WW18 174 aa10.59□□□□□ -0.71
LINC00339-206ENST00000634451 SPRYD4Q8WW59 207 aaPredicted RBP10.59□□□□□ -0.71
LINC00339-206ENST00000634451 ST8SIA4Q92187 359 aa10.59□□□□□ -0.71
LINC00339-206ENST00000634451 ERMAPQ96PL5 475 aaPredicted RBP10.59□□□□□ -0.71
LINC00339-206ENST00000634451 TRIM15Q9C019 465 aa10.59□□□□□ -0.71
LINC00339-206ENST00000634451 TOR3AQ9H497 397 aa10.59□□□□□ -0.71
LINC00339-206ENST00000634451 FN3KRPQ9HA64 309 aa10.59□□□□□ -0.71
LINC00339-206ENST00000634451 RPRD1BQ9NQG5 326 aaKnown RBP10.59□□□□□ -0.71
LINC00339-206ENST00000634451 ENPP4Q9Y6X5 453 aa10.59□□□□□ -0.71
LINC00339-206ENST00000634451 KMT2CQ8NEZ4 4911 aaKnown RBP10.58□□□□□ -0.72
LINC00339-206ENST00000634451 OR6C68A6NDL8 312 aa10.58□□□□□ -0.72
LINC00339-206ENST00000634451 UNC119BA6NIH7 251 aa10.58□□□□□ -0.72
LINC00339-206ENST00000634451 HIST1H1CP16403 213 aaKnown RBP10.58□□□□□ -0.72
LINC00339-206ENST00000634451 AMY2BP19961 511 aa10.58□□□□□ -0.72
LINC00339-206ENST00000634451 PYCR1P32322 319 aa10.58□□□□□ -0.72
LINC00339-206ENST00000634451 IFNA8P32881 189 aa10.58□□□□□ -0.72
LINC00339-206ENST00000634451 BPIFB3P59826 476 aa10.58□□□□□ -0.72
LINC00339-206ENST00000634451 CSNK2BP67870 215 aa10.58□□□□□ -0.72
LINC00339-206ENST00000634451 METTL21CQ5VZV1 264 aa10.58□□□□□ -0.72
LINC00339-206ENST00000634451 MRPL21Q7Z2W9 205 aaKnown RBP10.58□□□□□ -0.72
LINC00339-206ENST00000634451 ADCK1Q86TW2 530 aa10.58□□□□□ -0.72
LINC00339-206ENST00000634451 C11orf53Q8IXP5 236 aa10.58□□□□□ -0.72
LINC00339-206ENST00000634451 CELF2-AS1Q8N7Q2 184 aa10.58□□□□□ -0.72
LINC00339-206ENST00000634451 SDR9C7Q8NEX9 313 aa10.58□□□□□ -0.72
LINC00339-206ENST00000634451 LZICQ8WZA0 190 aa10.58□□□□□ -0.72
LINC00339-206ENST00000634451 CCL13Q99616 98 aa10.58□□□□□ -0.72
LINC00339-206ENST00000634451 ATF6BQ99941 703 aa10.58□□□□□ -0.72
LINC00339-206ENST00000634451 NDUFAF4Q9P032 175 aa10.58□□□□□ -0.72
LINC00339-206ENST00000634451 ONECUT1Q9UBC0 465 aa10.58□□□□□ -0.72
LINC00339-206ENST00000634451 N6AMT1Q9Y5N5 214 aa10.58□□□□□ -0.72
LINC00339-206ENST00000634451 hCG_1807616A0A1W2PRN6 198 aa10.57□□□□□ -0.72
LINC00339-206ENST00000634451 MEGF11A6BM72 1044 aa10.57□□□□□ -0.72
LINC00339-206ENST00000634451 TVP23AA6NH52 213 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms