RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 NPIPA2E9PIF3 369 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 NPIPA3F8WFD2 350 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 LINC01387J3KSC0 135 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 EEF1E1O43324 174 aaKnown RBP6.34□□□□□ -1.39
BRCA1-230ENST00000634433 ORC5O43913 435 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 CCNKO75909 580 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 MPZL1O95297 269 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 ECDO95905 644 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-230ENST00000634433 OPN1LWP04000 364 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 PSKH1P11801 424 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 CHRNA7P36544 502 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 CASRP41180 1078 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 MNDAP41218 407 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 KIR2DL3P43628 341 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 MMP16P51512 607 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 CAPZA1P52907 286 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 TPTEP56180 551 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 AP3S2P59780 193 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 H3F3AP84243 136 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 BCL2L15Q5TBC7 163 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 LRFN4Q6PJG9 635 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 UNQ6494/PRO21346Q6UXR6 183 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 FCRLAQ7L513 359 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 TMPRSS12Q86WS5 348 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 CMTM4Q8IZR5 234 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 TOMM5Q8N4H5 51 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 GFI1Q99684 422 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 CITED1Q99966 193 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 MOB1AQ9H8S9 216 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 SEC61A2Q9H9S3 476 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 CGGBP1Q9UFW8 167 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-230ENST00000634433 MRPS7Q9Y2R9 242 aaKnown RBP6.34□□□□□ -1.39
BRCA1-230ENST00000634433 POLR1DQ9Y2S0 133 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 CPAMD8Q8IZJ3 1885 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 AHRRA9YTQ3 701 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 C22orf46C9J442 243 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 ST8SIA3O43173 380 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 SSX4O60224 188 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 MAS1P04201 325 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 GSTT2BP0CG30 244 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 FSTP19883 344 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 CNR1P21554 472 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 HLA-DMAP28067 261 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 DLSTP36957 453 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 MAGEB1P43366 347 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 CSNK1A1P48729 337 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 DNASE1L1P49184 302 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 BTG1P62324 171 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 VAMP2P63027 116 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 DYRK1AQ13627 763 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 TAF13Q15543 124 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 BCL2A1Q16548 175 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 HIST3H3Q16695 136 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 ODF4Q2M2E3 257 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 PDSS1Q5T2R2 415 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 ASB18Q6ZVZ8 466 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 ASB5Q8WWX0 329 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 CREB3L1Q96BA8 519 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 FOXRED1Q96CU9 486 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-230ENST00000634433 SLAMF6Q96DU3 332 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 ZFP3Q96NJ6 502 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 EGLN1Q9GZT9 426 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 MMP28Q9H239 520 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 ZNF552Q9H707 407 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-230ENST00000634433 STMN3Q9NZ72 180 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 COPZ2Q9P299 210 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 OR5V1Q9UGF6 321 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 SLC22A13Q9Y226 551 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 EMC9Q9Y3B6 208 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 CACNG2Q9Y698 323 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 KIF26BQ2KJY2 2108 aa6.34□□□□□ -1.4
BRCA1-230ENST00000634433 IGKV1D-43A0A0B4J1Z2 117 aa6.33□□□□□ -1.4
BRCA1-230ENST00000634433 ZNF878C9JN71 531 aa6.33□□□□□ -1.4
BRCA1-230ENST00000634433 TFECO14948 347 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-230ENST00000634433 RAD1O60671 282 aa6.33□□□□□ -1.4
BRCA1-230ENST00000634433 SRSF10O75494 262 aaKnown RBP6.33□□□□□ -1.4
BRCA1-230ENST00000634433 HSD11B1P28845 292 aa6.33□□□□□ -1.4
BRCA1-230ENST00000634433 CLDN17P56750 224 aa6.33□□□□□ -1.4
BRCA1-230ENST00000634433 CLDN20P56880 219 aa6.33□□□□□ -1.4
BRCA1-230ENST00000634433 LSM6P62312 80 aaKnown RBP6.33□□□□□ -1.4
BRCA1-230ENST00000634433 OC90Q02509 493 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-230ENST00000634433 SPEM2Q0P670 501 aa6.33□□□□□ -1.4
BRCA1-230ENST00000634433 Q0VFX4 171 aa6.33□□□□□ -1.4
BRCA1-230ENST00000634433 GPR176Q14439 515 aa6.33□□□□□ -1.4
BRCA1-230ENST00000634433 RAB11BQ15907 218 aa6.33□□□□□ -1.4
BRCA1-230ENST00000634433 ABHD17BQ5VST6 288 aa6.33□□□□□ -1.4
BRCA1-230ENST00000634433 CDPF1Q6NVV7 123 aa6.33□□□□□ -1.4
BRCA1-230ENST00000634433 CREB3L2Q70SY1 520 aa6.33□□□□□ -1.4
BRCA1-230ENST00000634433 BPIFCQ8NFQ6 507 aa6.33□□□□□ -1.4
BRCA1-230ENST00000634433 OR13C3Q8NGS6 347 aa6.33□□□□□ -1.4
BRCA1-230ENST00000634433 OR6N1Q8NGY5 312 aa6.33□□□□□ -1.4
BRCA1-230ENST00000634433 OR14L1PQ8NHC6 308 aa6.33□□□□□ -1.4
BRCA1-230ENST00000634433 SYNPRQ8TBG9 265 aa6.33□□□□□ -1.4
BRCA1-230ENST00000634433 HAVCR1Q96D42 359 aa6.33□□□□□ -1.4
BRCA1-230ENST00000634433 THOC3Q96J01 351 aaKnown RBP6.33□□□□□ -1.4
BRCA1-230ENST00000634433 MARVELD1Q9BSK0 173 aa6.33□□□□□ -1.4
BRCA1-230ENST00000634433 POFUT1Q9H488 388 aa6.33□□□□□ -1.4
BRCA1-230ENST00000634433 G6PC2Q9NQR9 355 aa6.33□□□□□ -1.4
BRCA1-230ENST00000634433 DIABLOQ9NR28 239 aa6.33□□□□□ -1.4
BRCA1-230ENST00000634433 SLC17A5Q9NRA2 495 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms