RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 PGAM5Q96HS1 289 aa12.62□□□□□ -0.39
PNKP-221ENST00000627317 COX4I2Q96KJ9 171 aa12.62□□□□□ -0.39
PNKP-221ENST00000627317 POFUT1Q9H488 388 aa12.62□□□□□ -0.39
PNKP-221ENST00000627317 FGF20Q9NP95 211 aaPredicted RBP12.62□□□□□ -0.39
PNKP-221ENST00000627317 DYNLRB1Q9NP97 96 aa12.62□□□□□ -0.39
PNKP-221ENST00000627317 CNOT2Q9NZN8 540 aaKnown RBP12.62□□□□□ -0.39
PNKP-221ENST00000627317 MRM2Q9UI43 246 aaKnown RBP12.62□□□□□ -0.39
PNKP-221ENST00000627317 GNG8Q9UK08 70 aa12.62□□□□□ -0.39
PNKP-221ENST00000627317 GTF2A1LQ9UNN4 478 aa12.62□□□□□ -0.39
PNKP-221ENST00000627317 MYRFQ9Y2G1 1151 aa12.62□□□□□ -0.39
PNKP-221ENST00000627317 ARID1AO14497 2285 aa12.62□□□□□ -0.39
PNKP-221ENST00000627317 NAV3Q8IVL0 2385 aa12.61□□□□□ -0.39
PNKP-221ENST00000627317 METTL15A6NJ78 407 aa12.61□□□□□ -0.39
PNKP-221ENST00000627317 SLC1A7O00341 560 aa12.61□□□□□ -0.39
PNKP-221ENST00000627317 MAGEB4O15481 346 aaPredicted RBP12.61□□□□□ -0.39
PNKP-221ENST00000627317 PIPP12273 146 aaPredicted RBP12.61□□□□□ -0.39
PNKP-221ENST00000627317 BMP4P12644 408 aa12.61□□□□□ -0.39
PNKP-221ENST00000627317 MYL12AP19105 171 aa12.61□□□□□ -0.39
PNKP-221ENST00000627317 DCKP27707 260 aa12.61□□□□□ -0.39
PNKP-221ENST00000627317 DCTDP32321 178 aa12.61□□□□□ -0.39
PNKP-221ENST00000627317 MPV17P39210 176 aa12.61□□□□□ -0.39
PNKP-221ENST00000627317 RIPPLY3P57055 190 aa12.61□□□□□ -0.39
PNKP-221ENST00000627317 CSNK2BP67870 215 aa12.61□□□□□ -0.39
PNKP-221ENST00000627317 MED21Q13503 144 aa12.61□□□□□ -0.39
PNKP-221ENST00000627317 TIGD6Q17RP2 521 aa12.61□□□□□ -0.39
PNKP-221ENST00000627317 NKPD1Q17RQ9 610 aa12.61□□□□□ -0.39
PNKP-221ENST00000627317 TP53I3Q53FA7 332 aa12.61□□□□□ -0.39
PNKP-221ENST00000627317 MBNL2Q5VZF2 373 aaKnown RBP12.61□□□□□ -0.39
PNKP-221ENST00000627317 AHSA2Q719I0 299 aa12.61□□□□□ -0.39
PNKP-221ENST00000627317 MRPL21Q7Z2W9 205 aaKnown RBP12.61□□□□□ -0.39
PNKP-221ENST00000627317 LRP11Q86VZ4 500 aa12.61□□□□□ -0.39
PNKP-221ENST00000627317 CIARTQ8N365 385 aaPredicted RBP12.61□□□□□ -0.39
PNKP-221ENST00000627317 OR52H1Q8NGJ2 320 aa12.61□□□□□ -0.39
PNKP-221ENST00000627317 C18orf12Q96KH6 178 aa12.61□□□□□ -0.39
PNKP-221ENST00000627317 RHNO1Q9BSD3 238 aa12.61□□□□□ -0.39
PNKP-221ENST00000627317 ALG8Q9BVK2 526 aa12.61□□□□□ -0.39
PNKP-221ENST00000627317 OR10A2Q9H208 303 aa12.61□□□□□ -0.39
PNKP-221ENST00000627317 GSX1Q9H4S2 264 aaPredicted RBP12.61□□□□□ -0.39
PNKP-221ENST00000627317 PLCXD1Q9NUJ7 323 aa12.61□□□□□ -0.39
PNKP-221ENST00000627317 SCN3BQ9NY72 215 aa12.61□□□□□ -0.39
PNKP-221ENST00000627317 GPR160Q9UJ42 338 aa12.61□□□□□ -0.39
PNKP-221ENST00000627317 USF3Q68DE3 2245 aa12.61□□□□□ -0.39
PNKP-221ENST00000627317 TMEM269A0A1B0GVZ9 245 aa12.6□□□□□ -0.39
PNKP-221ENST00000627317 TRIM64A6NGJ6 449 aa12.6□□□□□ -0.39
PNKP-221ENST00000627317 TRIM64BA6NI03 449 aa12.6□□□□□ -0.39
PNKP-221ENST00000627317 LOC110117498-PIK3R3F6TDL0 507 aa12.6□□□□□ -0.39
PNKP-221ENST00000627317 XRCC2O43543 280 aa12.6□□□□□ -0.39
PNKP-221ENST00000627317 TIMM8AO60220 97 aaPredicted RBP12.6□□□□□ -0.39
PNKP-221ENST00000627317 SULT1C4O75897 302 aa12.6□□□□□ -0.39
PNKP-221ENST00000627317 RPP14O95059 124 aaKnown RBP12.6□□□□□ -0.39
PNKP-221ENST00000627317 CLPTM1O96005 669 aa12.6□□□□□ -0.39
PNKP-221ENST00000627317 EVX1P49640 407 aa12.6□□□□□ -0.39
PNKP-221ENST00000627317 GALEQ14376 348 aa12.6□□□□□ -0.39
PNKP-221ENST00000627317 HLXQ14774 488 aaPredicted RBP12.6□□□□□ -0.39
PNKP-221ENST00000627317 MOGQ16653 247 aa12.6□□□□□ -0.39
PNKP-221ENST00000627317 GFOD2Q3B7J2 385 aa12.6□□□□□ -0.39
PNKP-221ENST00000627317 CDONQ4KMG0 1287 aa12.6□□□□□ -0.39
PNKP-221ENST00000627317 GLYATL3Q5SZD4 288 aa12.6□□□□□ -0.39
PNKP-221ENST00000627317 LIPNQ5VXI9 398 aa12.6□□□□□ -0.39
PNKP-221ENST00000627317 FBXW12Q6X9E4 464 aa12.6□□□□□ -0.39
PNKP-221ENST00000627317 DNM1P46Q6ZS02 220 aa12.6□□□□□ -0.39
PNKP-221ENST00000627317 LHFPL3Q86UP9 236 aa12.6□□□□□ -0.39
PNKP-221ENST00000627317 STX19Q8N4C7 294 aa12.6□□□□□ -0.39
PNKP-221ENST00000627317 ZNF540Q8NDQ6 660 aa12.6□□□□□ -0.39
PNKP-221ENST00000627317 OR2AE1Q8NHA4 323 aa12.6□□□□□ -0.39
PNKP-221ENST00000627317 GGHQ92820 318 aa12.6□□□□□ -0.39
PNKP-221ENST00000627317 CMBLQ96DG6 245 aa12.6□□□□□ -0.39
PNKP-221ENST00000627317 TMEM80Q96HE8 168 aa12.6□□□□□ -0.39
PNKP-221ENST00000627317 Q96MF0 132 aa12.6□□□□□ -0.39
PNKP-221ENST00000627317 SMR3AQ99954 134 aa12.6□□□□□ -0.39
PNKP-221ENST00000627317 CACNG6Q9BXT2 260 aa12.6□□□□□ -0.39
PNKP-221ENST00000627317 MOB1AQ9H8S9 216 aa12.6□□□□□ -0.39
PNKP-221ENST00000627317 ACOXLQ9NUZ1 547 aa12.6□□□□□ -0.39
PNKP-221ENST00000627317 FAM206AQ9NX38 181 aa12.6□□□□□ -0.39
PNKP-221ENST00000627317 CHCHD3Q9NX63 227 aaKnown RBP12.6□□□□□ -0.39
PNKP-221ENST00000627317 ERVK13-1Q9NX77 482 aa12.6□□□□□ -0.39
PNKP-221ENST00000627317 TAAR3PQ9P1P4 343 aa12.6□□□□□ -0.39
PNKP-221ENST00000627317 PSORS1C1Q9UIG5 152 aa12.6□□□□□ -0.39
PNKP-221ENST00000627317 FBXO9Q9UK97 447 aaPredicted RBP12.6□□□□□ -0.39
PNKP-221ENST00000627317 DIMT1Q9UNQ2 313 aaKnown RBP12.6□□□□□ -0.39
PNKP-221ENST00000627317 EXOSC1Q9Y3B2 195 aaKnown RBP12.6□□□□□ -0.39
PNKP-221ENST00000627317 R4GMQ9 66 aa12.6□□□□□ -0.39
PNKP-221ENST00000627317 PMF1-BGLAPU3KQ54 211 aa12.6□□□□□ -0.39
PNKP-221ENST00000627317 IGLV3-9A0A075B6K5 115 aa12.59□□□□□ -0.39
PNKP-221ENST00000627317 C5orf63A6NC05 138 aa12.59□□□□□ -0.39
PNKP-221ENST00000627317 ACOD1A6NK06 481 aa12.59□□□□□ -0.39
PNKP-221ENST00000627317 J3QLW9 94 aa12.59□□□□□ -0.39
PNKP-221ENST00000627317 M0R233 179 aa12.59□□□□□ -0.39
PNKP-221ENST00000627317 IGHV3-13P01766 116 aa12.59□□□□□ -0.39
PNKP-221ENST00000627317 IGHV4-39P01824 125 aa12.59□□□□□ -0.39
PNKP-221ENST00000627317 MT-ND5P03915 603 aa12.59□□□□□ -0.39
PNKP-221ENST00000627317 TACSTD2P09758 323 aa12.59□□□□□ -0.39
PNKP-221ENST00000627317 RAC2P15153 192 aa12.59□□□□□ -0.39
PNKP-221ENST00000627317 ZNF19P17023 458 aa12.59□□□□□ -0.39
PNKP-221ENST00000627317 ATP5J2P56134 94 aa12.59□□□□□ -0.39
PNKP-221ENST00000627317 MFGE8Q08431 387 aaPredicted RBP12.59□□□□□ -0.39
PNKP-221ENST00000627317 ST3GAL4Q11206 333 aa12.59□□□□□ -0.39
PNKP-221ENST00000627317 SWI5Q1ZZU3 235 aa12.59□□□□□ -0.39
PNKP-221ENST00000627317 ZNF684Q5T5D7 378 aa12.59□□□□□ -0.39
PNKP-221ENST00000627317 BCL2L15Q5TBC7 163 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms