RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 TEAD3Q99594 435 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 SLC35A5Q9BS91 424 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 BEX2Q9BXY8 128 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 MRPS26Q9BYN8 205 aaKnown RBP2.79□□□□□ -1.96
BRCA1-229ENST00000621897 NAA50Q9GZZ1 169 aaKnown RBP2.79□□□□□ -1.96
BRCA1-229ENST00000621897 PLGRKTQ9HBL7 147 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 FGF20Q9NP95 211 aaPredicted RBP2.79□□□□□ -1.96
BRCA1-229ENST00000621897 NLE1Q9NVX2 485 aaPredicted RBP2.79□□□□□ -1.96
BRCA1-229ENST00000621897 RHBDL2Q9NX52 303 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 CCDC59Q9P031 241 aaKnown RBP2.79□□□□□ -1.96
BRCA1-229ENST00000621897 CYB5R1Q9UHQ9 305 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 GUCA1BQ9UMX6 200 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 ERGIC3Q9Y282 383 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 CDC42BPBQ9Y5S2 1711 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 COL22A1Q8NFW1 1626 aaPredicted RBP2.79□□□□□ -1.96
BRCA1-229ENST00000621897 NUP153P49790 1475 aaKnown RBP2.78□□□□□ -1.96
BRCA1-229ENST00000621897 C9orf84Q5VXU9 1444 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 CEMIPQ8WUJ3 1361 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 ABCB11O95342 1321 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 GLYATL1P3A0A0U1RQE8 302 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 ANKRD20A5PA0PJZ0 165 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 PINLYPA6NC86 204 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 VSTM2BA6NLU5 285 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 FTCDNL1E5RQL4 147 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 H7C0C1 242 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 M0QZ92 97 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 HSD17B6O14756 317 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 PPIHO43447 177 aaKnown RBP2.78□□□□□ -1.96
BRCA1-229ENST00000621897 ATP8B1O43520 1251 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 HPGDSO60760 199 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 RAMP1O60894 148 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 UTS2O95399 124 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 DHFRP00374 187 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 HLA-AP01891 365 aaKnown RBP2.78□□□□□ -1.96
BRCA1-229ENST00000621897 APOEP02649 317 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 CCDC166P0CW27 439 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 C8orf88P0DMB2 117 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 PSMB1P20618 241 aaKnown RBP2.78□□□□□ -1.96
BRCA1-229ENST00000621897 IGHV1-2P23083 117 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 S100A1P23297 94 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 ATP5A1P25705 553 aaKnown RBP2.78□□□□□ -1.96
BRCA1-229ENST00000621897 IDH3GP51553 393 aaPredicted RBP2.78□□□□□ -1.96
BRCA1-229ENST00000621897 DIO3P55073 304 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 TAS2R60P59551 318 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 SLC35B1P78383 322 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 AESQ08117 197 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 SRSF6Q13247 344 aaKnown RBP2.78□□□□□ -1.96
BRCA1-229ENST00000621897 ZIC1Q15915 447 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 DUSP7Q16829 419 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 TRMT5Q32P41 509 aaKnown RBP2.78□□□□□ -1.96
BRCA1-229ENST00000621897 RFX4Q33E94 735 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 ACSM3Q53FZ2 586 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 PDZD11Q5EBL8 140 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 ACTL10Q5JWF8 245 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 OGFRL1Q5TC84 451 aaPredicted RBP2.78□□□□□ -1.96
BRCA1-229ENST00000621897 OTPQ5XKR4 325 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 DUPD1Q68J44 220 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 FRMPD2BQ6IN97 320 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 NIPAL1Q6NVV3 410 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 LRRN1Q6UXK5 716 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 STAC2Q6ZMT1 411 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 TIFABQ6ZNK6 161 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 ACOT7LQ6ZUV0 252 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 CMC1Q7Z7K0 106 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 MRPL52Q86TS9 123 aaKnown RBP2.78□□□□□ -1.96
BRCA1-229ENST00000621897 LINC01561Q8N1V8 128 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 LRRC52Q8N7C0 313 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 ACBD4Q8NC06 268 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 OR4F17Q8NGA8 305 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 OR4K2Q8NGD2 314 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 OR52H1Q8NGJ2 320 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 OR5K2Q8NHB8 316 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 SYNPRQ8TBG9 265 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 DYNC2LI1Q8TCX1 351 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 RNASEH2CQ8TDP1 164 aaKnown RBP2.78□□□□□ -1.96
BRCA1-229ENST00000621897 NEK7Q8TDX7 302 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 NELFBQ8WX92 580 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 OR8D1Q8WZ84 308 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 ELSPBP1Q96BH3 223 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 PPWD1Q96BP3 646 aaKnown RBP2.78□□□□□ -1.96
BRCA1-229ENST00000621897 OR4F4Q96R69 305 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 NIPSNAP1Q9BPW8 284 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 ZNF670Q9BS34 389 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 COPS4Q9BT78 406 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 HCAR1Q9BXC0 346 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 CHRNA10Q9GZZ6 450 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 METTL9Q9H1A3 318 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 GLIPR2Q9H4G4 154 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 ASB7Q9H672 318 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 PARVBQ9HBI1 364 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 C6orf50Q9HD87 102 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 RETNQ9HD89 108 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 C12orf4Q9NQ89 552 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 DIABLOQ9NR28 239 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 FGFR1OP2Q9NVK5 253 aa2.78□□□□□ -1.96
BRCA1-229ENST00000621897 PAIP2BQ9ULR5 123 aaKnown RBP2.78□□□□□ -1.96
BRCA1-229ENST00000621897 DCAF1Q9Y4B6 1507 aa2.78□□□□□ -1.97
BRCA1-229ENST00000621897 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.77□□□□□ -1.97
BRCA1-229ENST00000621897 A0A0B4J2E0 115 aa2.77□□□□□ -1.97
BRCA1-229ENST00000621897 A0A1B0GX12 115 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms