RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 ART1P52961 327 aa18.74■□□□□ 0.59
SPAST-204ENST00000621856 SCAND1P57086 179 aa18.74■□□□□ 0.59
SPAST-204ENST00000621856 SNAI3Q3KNW1 292 aa18.74■□□□□ 0.59
SPAST-204ENST00000621856 ZNF585AQ6P3V2 769 aa18.74■□□□□ 0.59
SPAST-204ENST00000621856 C19orf18Q8NEA5 215 aa18.74■□□□□ 0.59
SPAST-204ENST00000621856 OR13C9Q8NGT0 318 aa18.74■□□□□ 0.59
SPAST-204ENST00000621856 NKX3-1Q99801 234 aaPredicted RBP18.74■□□□□ 0.59
SPAST-204ENST00000621856 SP140LQ9H930 580 aa18.74■□□□□ 0.59
SPAST-204ENST00000621856 TP53TG5Q9Y2B4 290 aa18.74■□□□□ 0.59
SPAST-204ENST00000621856 MRPS7Q9Y2R9 242 aaKnown RBP18.74■□□□□ 0.59
SPAST-204ENST00000621856 LOC400499M0QZD8 3231 aa18.73■□□□□ 0.59
SPAST-204ENST00000621856 IGLV3-1P01715 115 aa18.73■□□□□ 0.59
SPAST-204ENST00000621856 LCATP04180 440 aa18.73■□□□□ 0.59
SPAST-204ENST00000621856 CD79AP11912 226 aa18.73■□□□□ 0.59
SPAST-204ENST00000621856 NR4A2P43354 598 aa18.73■□□□□ 0.59
SPAST-204ENST00000621856 INPP1P49441 399 aa18.73■□□□□ 0.59
SPAST-204ENST00000621856 PITPNAQ00169 270 aa18.73■□□□□ 0.59
SPAST-204ENST00000621856 KRTAP27-1Q3LI81 207 aa18.73■□□□□ 0.59
SPAST-204ENST00000621856 ACSF3Q4G176 576 aaPredicted RBP18.73■□□□□ 0.59
SPAST-204ENST00000621856 FGD2Q7Z6J4 655 aa18.73■□□□□ 0.59
SPAST-204ENST00000621856 OR51D1Q8NGF3 324 aa18.73■□□□□ 0.59
SPAST-204ENST00000621856 OR14K1Q8NGZ2 314 aa18.73■□□□□ 0.59
SPAST-204ENST00000621856 EXTL1Q92935 676 aa18.73■□□□□ 0.59
SPAST-204ENST00000621856 WNT2BQ93097 391 aa18.73■□□□□ 0.59
SPAST-204ENST00000621856 TMEM138Q9NPI0 162 aa18.73■□□□□ 0.59
SPAST-204ENST00000621856 ZNF224Q9NZL3 707 aa18.73■□□□□ 0.59
SPAST-204ENST00000621856 ZFHX4Q86UP3 3567 aa18.73■□□□□ 0.59
SPAST-204ENST00000621856 UBL3O95164 117 aa18.72■□□□□ 0.59
SPAST-204ENST00000621856 HLA-HP01893 362 aa18.72■□□□□ 0.59
SPAST-204ENST00000621856 HTR2CP28335 458 aa18.72■□□□□ 0.59
SPAST-204ENST00000621856 GLYATL3Q5SZD4 288 aa18.72■□□□□ 0.59
SPAST-204ENST00000621856 PGAP1Q75T13 922 aa18.72■□□□□ 0.59
SPAST-204ENST00000621856 FAM214BQ7L5A3 538 aa18.72■□□□□ 0.59
SPAST-204ENST00000621856 IZUMO1Q8IYV9 350 aa18.72■□□□□ 0.59
SPAST-204ENST00000621856 C9orf106Q8NAJ2 232 aa18.72■□□□□ 0.59
SPAST-204ENST00000621856 OR6M1Q8NGM8 313 aa18.72■□□□□ 0.59
SPAST-204ENST00000621856 RAB40AQ8WXH6 277 aa18.72■□□□□ 0.59
SPAST-204ENST00000621856 FAM3DQ96BQ1 224 aa18.72■□□□□ 0.59
SPAST-204ENST00000621856 FOXRED1Q96CU9 486 aaPredicted RBP18.72■□□□□ 0.59
SPAST-204ENST00000621856 S100A16Q96FQ6 103 aaKnown RBP18.72■□□□□ 0.59
SPAST-204ENST00000621856 ABCG5Q9H222 651 aa18.72■□□□□ 0.59
SPAST-204ENST00000621856 RHBDL2Q9NX52 303 aa18.72■□□□□ 0.59
SPAST-204ENST00000621856 ERCC1P07992 297 aaPredicted RBP18.71■□□□□ 0.59
SPAST-204ENST00000621856 ADRB1P08588 477 aa18.71■□□□□ 0.59
SPAST-204ENST00000621856 POU3F4P49335 361 aa18.71■□□□□ 0.59
SPAST-204ENST00000621856 HGFACQ04756 655 aa18.71■□□□□ 0.59
SPAST-204ENST00000621856 FAM166AQ6J272 317 aa18.71■□□□□ 0.59
SPAST-204ENST00000621856 TMEM53Q6P2H8 277 aa18.71■□□□□ 0.59
SPAST-204ENST00000621856 CNEP1R1Q8N9A8 125 aa18.71■□□□□ 0.59
SPAST-204ENST00000621856 CCDC54Q8NEL0 328 aa18.71■□□□□ 0.59
SPAST-204ENST00000621856 OR1K1Q8NGR3 316 aa18.71■□□□□ 0.59
SPAST-204ENST00000621856 GPR137Q96N19 417 aa18.71■□□□□ 0.59
SPAST-204ENST00000621856 ABHD1Q96SE0 405 aa18.71■□□□□ 0.59
SPAST-204ENST00000621856 ATPIF1Q9UII2 106 aa18.71■□□□□ 0.59
SPAST-204ENST00000621856 ACACAQ13085 2346 aa18.71■□□□□ 0.59
SPAST-204ENST00000621856 LOC100289279A0A1B0GTE1 492 aa18.71■□□□□ 0.59
SPAST-204ENST00000621856 MTRF1O75570 445 aaKnown RBP18.71■□□□□ 0.59
SPAST-204ENST00000621856 DHRS3O75911 302 aa18.71■□□□□ 0.59
SPAST-204ENST00000621856 ARR3P36575 388 aa18.71■□□□□ 0.59
SPAST-204ENST00000621856 TMPRSS3P57727 454 aa18.71■□□□□ 0.59
SPAST-204ENST00000621856 C2orf76Q3KRA6 126 aa18.71■□□□□ 0.59
SPAST-204ENST00000621856 OR2A2Q6IF42 318 aa18.71■□□□□ 0.59
SPAST-204ENST00000621856 ANKRD16Q6P6B7 361 aa18.71■□□□□ 0.59
SPAST-204ENST00000621856 FAM180AQ6UWF9 173 aa18.71■□□□□ 0.59
SPAST-204ENST00000621856 CPEB3Q8NE35 698 aaKnown RBP18.71■□□□□ 0.59
SPAST-204ENST00000621856 OR52N4Q8NGI2 321 aa18.71■□□□□ 0.59
SPAST-204ENST00000621856 SGK3Q96BR1 496 aa18.71■□□□□ 0.59
SPAST-204ENST00000621856 ZFP3Q96NJ6 502 aa18.71■□□□□ 0.59
SPAST-204ENST00000621856 SORCS2Q96PQ0 1159 aa18.71■□□□□ 0.59
SPAST-204ENST00000621856 FAIMQ9NVQ4 179 aa18.71■□□□□ 0.59
SPAST-204ENST00000621856 RABL2AQ9UBK7 228 aaPredicted RBP18.71■□□□□ 0.59
SPAST-204ENST00000621856 RABL2BQ9UNT1 228 aa18.71■□□□□ 0.59
SPAST-204ENST00000621856 V9GYS6 101 aa18.71■□□□□ 0.59
SPAST-204ENST00000621856 SULT1B1O43704 296 aa18.7■□□□□ 0.58
SPAST-204ENST00000621856 IL18BPO95998 194 aa18.7■□□□□ 0.58
SPAST-204ENST00000621856 CD37P11049 281 aa18.7■□□□□ 0.58
SPAST-204ENST00000621856 C1orf100Q5SVJ3 147 aa18.7■□□□□ 0.58
SPAST-204ENST00000621856 ZNF529Q6P280 563 aa18.7■□□□□ 0.58
SPAST-204ENST00000621856 TFAP2EQ6VUC0 442 aa18.7■□□□□ 0.58
SPAST-204ENST00000621856 SLC25A28Q96A46 364 aa18.7■□□□□ 0.58
SPAST-204ENST00000621856 LOC390937A0A1W2PQ73 354 aa18.69■□□□□ 0.58
SPAST-204ENST00000621856 HLA-DQB1P01920 261 aa18.69■□□□□ 0.58
SPAST-204ENST00000621856 SPNP16150 400 aa18.69■□□□□ 0.58
SPAST-204ENST00000621856 THBS4P35443 961 aa18.69■□□□□ 0.58
SPAST-204ENST00000621856 PLA2G7Q13093 441 aa18.69■□□□□ 0.58
SPAST-204ENST00000621856 ASAH1Q13510 395 aa18.69■□□□□ 0.58
SPAST-204ENST00000621856 SF3B4Q15427 424 aaKnown RBP eCLIP18.69■□□□□ 0.58
SPAST-204ENST00000621856 GUSBP1Q15486 140 aa18.69■□□□□ 0.58
SPAST-204ENST00000621856 NSUN5P2Q63ZY6 315 aa18.69■□□□□ 0.58
SPAST-204ENST00000621856 GDPD3Q7L5L3 318 aa18.69■□□□□ 0.58
SPAST-204ENST00000621856 OR2AE1Q8NHA4 323 aa18.69■□□□□ 0.58
SPAST-204ENST00000621856 NANOS1Q8WY41 292 aaKnown RBP18.69■□□□□ 0.58
SPAST-204ENST00000621856 RFT1Q96AA3 541 aa18.69■□□□□ 0.58
SPAST-204ENST00000621856 HAVCR1Q96D42 359 aa18.69■□□□□ 0.58
SPAST-204ENST00000621856 REEP6Q96HR9 211 aa18.69■□□□□ 0.58
SPAST-204ENST00000621856 KCNK15Q9H427 330 aa18.69■□□□□ 0.58
SPAST-204ENST00000621856 FRYQ5TBA9 3013 aa18.69■□□□□ 0.58
SPAST-204ENST00000621856 EEF1E1O43324 174 aaKnown RBP18.69■□□□□ 0.58
SPAST-204ENST00000621856 UCNP55089 124 aa18.69■□□□□ 0.58
SPAST-204ENST00000621856 RAB1AP62820 205 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms