RNA–Protein interactions for RNA: ENST00000621242.1

SNHG28-203, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNHG28, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-203ENST00000621242 WDFY2Q96P53 400 aa12.88□□□□□ -0.35
SNHG28-203ENST00000621242 RAB3IPQ96QF0 476 aaPredicted RBP12.88□□□□□ -0.35
SNHG28-203ENST00000621242 C16orf95Q9H693 158 aa12.88□□□□□ -0.35
SNHG28-203ENST00000621242 IL1RAPQ9NPH3 570 aa12.88□□□□□ -0.35
SNHG28-203ENST00000621242 VNN3Q9NY84 501 aa12.88□□□□□ -0.35
SNHG28-203ENST00000621242 TMCC3Q9ULS5 477 aa12.88□□□□□ -0.35
SNHG28-203ENST00000621242 MED31Q9Y3C7 131 aa12.88□□□□□ -0.35
SNHG28-203ENST00000621242 DNAH3Q8TD57 4116 aa12.88□□□□□ -0.35
SNHG28-203ENST00000621242 HLA-DPB1P04440 258 aa12.87□□□□□ -0.35
SNHG28-203ENST00000621242 LIPFP07098 398 aa12.87□□□□□ -0.35
SNHG28-203ENST00000621242 DBHP09172 617 aa12.87□□□□□ -0.35
SNHG28-203ENST00000621242 IRF2P14316 349 aa12.87□□□□□ -0.35
SNHG28-203ENST00000621242 RHCEP18577 417 aa12.87□□□□□ -0.35
SNHG28-203ENST00000621242 NPY4RP50391 375 aa12.87□□□□□ -0.35
SNHG28-203ENST00000621242 HOXA4Q00056 320 aaPredicted RBP12.87□□□□□ -0.35
SNHG28-203ENST00000621242 SPIBQ01892 262 aa12.87□□□□□ -0.35
SNHG28-203ENST00000621242 SAMD5Q5TGI4 173 aa12.87□□□□□ -0.35
SNHG28-203ENST00000621242 METTL11BQ5VVY1 283 aa12.87□□□□□ -0.35
SNHG28-203ENST00000621242 OTPQ5XKR4 325 aa12.87□□□□□ -0.35
SNHG28-203ENST00000621242 LDLRAD3Q86YD5 345 aa12.87□□□□□ -0.35
SNHG28-203ENST00000621242 LRRC75AQ8NAA5 344 aa12.87□□□□□ -0.35
SNHG28-203ENST00000621242 SCCPDHQ8NBX0 429 aa12.87□□□□□ -0.35
SNHG28-203ENST00000621242 FNDC11Q9BVV2 318 aa12.87□□□□□ -0.35
SNHG28-203ENST00000621242 POLR2J2Q9GZM3 115 aaKnown RBP12.87□□□□□ -0.35
SNHG28-203ENST00000621242 POLR2J3Q9H1A7 115 aaKnown RBP12.87□□□□□ -0.35
SNHG28-203ENST00000621242 NMNAT1Q9HAN9 279 aaPredicted RBP12.87□□□□□ -0.35
SNHG28-203ENST00000621242 CTSZQ9UBR2 303 aa12.87□□□□□ -0.35
SNHG28-203ENST00000621242 TRBV4-1A0A0J9YWV2 114 aa12.86□□□□□ -0.35
SNHG28-203ENST00000621242 ZNF816-ZNF321PA0A0X1KG74 233 aa12.86□□□□□ -0.35
SNHG28-203ENST00000621242 A6NIZ1 184 aa12.86□□□□□ -0.35
SNHG28-203ENST00000621242 FKBP6O75344 327 aa12.86□□□□□ -0.35
SNHG28-203ENST00000621242 RAP2AP10114 183 aa12.86□□□□□ -0.35
SNHG28-203ENST00000621242 RRM2P31350 389 aa12.86□□□□□ -0.35
SNHG28-203ENST00000621242 ACTR3P61158 418 aa12.86□□□□□ -0.35
SNHG28-203ENST00000621242 RAP1BP61224 184 aa12.86□□□□□ -0.35
SNHG28-203ENST00000621242 RAP1AP62834 184 aa12.86□□□□□ -0.35
SNHG28-203ENST00000621242 ST3GAL3Q11203 375 aa12.86□□□□□ -0.35
SNHG28-203ENST00000621242 PPP1R8Q12972 351 aaKnown RBP12.86□□□□□ -0.35
SNHG28-203ENST00000621242 DHRS7BQ6IAN0 325 aaPredicted RBP12.86□□□□□ -0.35
SNHG28-203ENST00000621242 CYP4Z1Q86W10 505 aa12.86□□□□□ -0.35
SNHG28-203ENST00000621242 PDZD9Q8IXQ8 264 aa12.86□□□□□ -0.35
SNHG28-203ENST00000621242 OR5L1Q8NGL2 311 aa12.86□□□□□ -0.35
SNHG28-203ENST00000621242 OR52J3Q8NH60 311 aa12.86□□□□□ -0.35
SNHG28-203ENST00000621242 OR1F12Q8NHA8 337 aa12.86□□□□□ -0.35
SNHG28-203ENST00000621242 RASD2Q96D21 266 aa12.86□□□□□ -0.35
SNHG28-203ENST00000621242 DHRS1Q96LJ7 313 aa12.86□□□□□ -0.35
SNHG28-203ENST00000621242 CHID1Q9BWS9 393 aa12.86□□□□□ -0.35
SNHG28-203ENST00000621242 SIRPDQ9H106 197 aa12.86□□□□□ -0.35
SNHG28-203ENST00000621242 DPAGT1Q9H3H5 408 aa12.86□□□□□ -0.35
SNHG28-203ENST00000621242 TMEM100Q9NV29 134 aa12.86□□□□□ -0.35
SNHG28-203ENST00000621242 ERVK-18Q9QC07 812 aa12.86□□□□□ -0.35
SNHG28-203ENST00000621242 FAM32AQ9Y421 112 aaKnown RBP12.86□□□□□ -0.35
SNHG28-203ENST00000621242 COL7A1Q02388 2944 aa12.85□□□□□ -0.35
SNHG28-203ENST00000621242 OR6C6A6NF89 314 aa12.85□□□□□ -0.35
SNHG28-203ENST00000621242 IQCF6A8MYZ5 107 aa12.85□□□□□ -0.35
SNHG28-203ENST00000621242 J3QW42 95 aa12.85□□□□□ -0.35
SNHG28-203ENST00000621242 TIPRLO75663 272 aa12.85□□□□□ -0.35
SNHG28-203ENST00000621242 TSPAN9O75954 239 aa12.85□□□□□ -0.35
SNHG28-203ENST00000621242 H1F0P07305 194 aaKnown RBP12.85□□□□□ -0.35
SNHG28-203ENST00000621242 IFI30P13284 250 aa12.85□□□□□ -0.35
SNHG28-203ENST00000621242 FPR3P25089 353 aa12.85□□□□□ -0.35
SNHG28-203ENST00000621242 GATA4P43694 442 aa12.85□□□□□ -0.35
SNHG28-203ENST00000621242 RGS6P49758 472 aa12.85□□□□□ -0.35
SNHG28-203ENST00000621242 ARF6P62330 175 aa12.85□□□□□ -0.35
SNHG28-203ENST00000621242 EGR3Q06889 387 aa12.85□□□□□ -0.35
SNHG28-203ENST00000621242 MAB21L1Q13394 359 aa12.85□□□□□ -0.35
SNHG28-203ENST00000621242 AQP6Q13520 282 aa12.85□□□□□ -0.35
SNHG28-203ENST00000621242 TRAM2Q15035 370 aa12.85□□□□□ -0.35
SNHG28-203ENST00000621242 SEC23BQ15437 767 aa12.85□□□□□ -0.35
SNHG28-203ENST00000621242 CCDC92Q53HC0 331 aaPredicted RBP12.85□□□□□ -0.35
SNHG28-203ENST00000621242 FGD3Q5JSP0 725 aa12.85□□□□□ -0.35
SNHG28-203ENST00000621242 CLEC12AQ5QGZ9 265 aa12.85□□□□□ -0.35
SNHG28-203ENST00000621242 TBPL2Q6SJ96 375 aa12.85□□□□□ -0.35
SNHG28-203ENST00000621242 REC114Q7Z4M0 266 aa12.85□□□□□ -0.35
SNHG28-203ENST00000621242 PNLDC1Q8NA58 520 aaKnown RBP12.85□□□□□ -0.35
SNHG28-203ENST00000621242 PAPD5Q8NDF8 572 aaKnown RBP12.85□□□□□ -0.35
SNHG28-203ENST00000621242 OR51A7Q8NH64 312 aa12.85□□□□□ -0.35
SNHG28-203ENST00000621242 PYDC1Q8WXC3 89 aa12.85□□□□□ -0.35
SNHG28-203ENST00000621242 LRTOMTQ8WZ04 291 aa12.85□□□□□ -0.35
SNHG28-203ENST00000621242 BPIFA2Q96DR5 249 aa12.85□□□□□ -0.35
SNHG28-203ENST00000621242 RASSF4Q9H2L5 321 aa12.85□□□□□ -0.35
SNHG28-203ENST00000621242 WDR76Q9H967 626 aa12.85□□□□□ -0.35
SNHG28-203ENST00000621242 UFSP2Q9NUQ7 469 aa12.85□□□□□ -0.35
SNHG28-203ENST00000621242 TRAV27A0A087WT01 109 aa12.84□□□□□ -0.35
SNHG28-203ENST00000621242 A0A087WUU8 490 aa12.84□□□□□ -0.35
SNHG28-203ENST00000621242 FAM20BO75063 409 aa12.84□□□□□ -0.35
SNHG28-203ENST00000621242 OPN1MWP04001 364 aa12.84□□□□□ -0.35
SNHG28-203ENST00000621242 OPN1MW2P0DN77 364 aa12.84□□□□□ -0.35
SNHG28-203ENST00000621242 OPN1MW3P0DN78 364 aa12.84□□□□□ -0.35
SNHG28-203ENST00000621242 PRSS12P56730 875 aa12.84□□□□□ -0.35
SNHG28-203ENST00000621242 COX10Q12887 443 aa12.84□□□□□ -0.35
SNHG28-203ENST00000621242 FHL1Q13642 323 aa12.84□□□□□ -0.35
SNHG28-203ENST00000621242 PRAMEF6Q5VXH4 476 aa12.84□□□□□ -0.35
SNHG28-203ENST00000621242 SFRP4Q6FHJ7 346 aaPredicted RBP12.84□□□□□ -0.35
SNHG28-203ENST00000621242 PIP4P2Q8N4L2 257 aa12.84□□□□□ -0.35
SNHG28-203ENST00000621242 OR11L1Q8NGX0 322 aa12.84□□□□□ -0.35
SNHG28-203ENST00000621242 Q8TCH9 128 aa12.84□□□□□ -0.35
SNHG28-203ENST00000621242 SLC7A13Q8TCU3 470 aa12.84□□□□□ -0.35
SNHG28-203ENST00000621242 MRAPQ8TCY5 172 aa12.84□□□□□ -0.35
SNHG28-203ENST00000621242 APOBEC3DQ96AK3 386 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms