RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 H3BSH0 61 aa9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 LILRA1O75019 489 aa9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 LALBAP00709 142 aa9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 APOC1P02654 83 aa9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 TTRP02766 147 aa9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 MYL12AP19105 171 aa9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 GCH1P30793 250 aa9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 DCTDP32321 178 aa9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 ALDH3B1P43353 468 aa9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 MAP2K4P45985 399 aa9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 MMP16P51512 607 aa9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 GTF2A1P52655 376 aaPredicted RBP9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 CDH15P55291 814 aa9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 NANOS3P60323 173 aaKnown RBP9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 GK2Q14410 553 aaPredicted RBP9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 SWI5Q1ZZU3 235 aa9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 ODF4Q2M2E3 257 aa9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 ZNF829Q3KNS6 432 aaPredicted RBP9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 WDR38Q5JTN6 314 aa9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 MBNL2Q5VZF2 373 aaKnown RBP9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 XAF1Q6GPH4 301 aa9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 OR2T2Q6IF00 324 aa9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 C11orf71Q6IPW1 123 aa9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 CATSPERDQ86XM0 798 aa9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 KLBQ86Z14 1044 aa9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 OR5AS1Q8N127 324 aa9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 ZCCHC24Q8N2G6 241 aaKnown RBP9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 KLHL36Q8N4N3 616 aa9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 OR5L1Q8NGL2 311 aa9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 IGFBPL1Q8WX77 278 aa9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 GATAD2BQ8WXI9 593 aa9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 MYDGFQ969H8 173 aa9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 REEP6Q96HR9 211 aa9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 LURAP1Q96LR2 239 aa9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 CCDC90BQ9GZT6 254 aa9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 PLK3Q9H4B4 646 aa9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 CBLN4Q9NTU7 201 aa9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 TAAR3PQ9P1P4 343 aa9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 PLEKHA6Q9Y2H5 1048 aa9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 CAB39Q9Y376 341 aaPredicted RBP9.36□□□□□ -0.91
POLR2J3-221ENST00000621093 IGLV3-9A0A075B6K5 115 aa9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 A0A1W2PPW3 197 aa9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 P2RY10O00398 339 aa9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 RGS10O43665 173 aa9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 TACSTD2P09758 323 aa9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 CD53P19397 219 aa9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 EEF1B2P24534 225 aaKnown RBP9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 CDKN1AP38936 164 aa9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 KLF3P57682 345 aaPredicted RBP9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 ACTA2P62736 377 aa9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 ACTG2P63267 376 aa9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 MALLQ13021 153 aa9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 AKAP6Q13023 2319 aa9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 TNK1Q13470 666 aa9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 IRF3Q14653 427 aa9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 EFNB3Q15768 340 aa9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 TIGD6Q17RP2 521 aa9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 BCL2L15Q5TBC7 163 aa9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 AGAP6Q5VW22 663 aa9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 PAMR1Q6UXH9 720 aa9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 UNQ6126/PRO20091Q6UXV3 157 aa9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 FBXW12Q6X9E4 464 aa9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 C20orf204Q6ZNR8 217 aa9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 MRPL21Q7Z2W9 205 aaKnown RBP9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 KCTD20Q7Z5Y7 419 aa9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 DTX2Q86UW9 622 aa9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 ELMOD2Q8IZ81 293 aa9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 SYS1Q8N2H4 156 aa9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 NANOGP1Q8N7R0 232 aa9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 ZFP41Q8N8Y5 198 aa9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 ZNF485Q8NCK3 441 aa9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 OR2G2Q8NGZ5 317 aa9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 OR51E1Q8TCB6 317 aa9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 HAVCR1Q96D42 359 aa9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 OR5M11Q96RB7 305 aa9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 REPIN1Q9BWE0 567 aaKnown RBP9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 OR10A2Q9H208 303 aa9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 CELSR2Q9HCU4 2923 aa9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 CHCHD3Q9NX63 227 aaKnown RBP9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 FRRS1LQ9P0K9 344 aa9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 NUFIP1Q9UHK0 495 aaKnown RBP9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 PURGQ9UJV8 347 aaKnown RBP9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 SNX5Q9Y5X3 404 aa9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 SIRT4Q9Y6E7 314 aaPredicted RBP9.35□□□□□ -0.91
POLR2J3-221ENST00000621093 LRBAP50851 2863 aa9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 A0A1B0GTI1 187 aa9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 hCG_38984A0A1B0GV85 526 aa9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 ACOD1A6NK06 481 aa9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 B9A039 149 aa9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 J3QW42 95 aa9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 MYL12BO14950 172 aa9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 XRCC2O43543 280 aa9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 TIMM8AO60220 97 aaPredicted RBP9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 LMX1BO60663 402 aa9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 IGLV3-1P01715 115 aa9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 IGHV3-13P01766 116 aa9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 MT-ND5P03915 603 aa9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 NAT2P11245 290 aa9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 RAC2P15153 192 aa9.34□□□□□ -0.91
POLR2J3-221ENST00000621093 KITLGP21583 273 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms