RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 PRSS54Q6PEW0 395 aa17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 C9orf40Q8IXQ3 194 aa17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 TERB2Q8NHR7 220 aa17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 ASB10Q8WXI3 467 aa17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 FOXQ1Q9C009 403 aa17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 DZANK1Q9NVP4 752 aa17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 ANAPC10Q9UM13 185 aa17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 GPR132Q9UNW8 380 aa17.42■□□□□ 0.38
PDLIM3-212ENST00000620787 A0A0A6YYD4 124 aa17.41■□□□□ 0.38
PDLIM3-212ENST00000620787 AHSA1O95433 338 aa17.41■□□□□ 0.38
PDLIM3-212ENST00000620787 NR0B1P51843 470 aaKnown RBP17.41■□□□□ 0.38
PDLIM3-212ENST00000620787 S100A12P80511 92 aa17.41■□□□□ 0.38
PDLIM3-212ENST00000620787 GPR119Q8TDV5 335 aa17.41■□□□□ 0.38
PDLIM3-212ENST00000620787 ADAMTS17Q8TE56 1095 aa17.41■□□□□ 0.38
PDLIM3-212ENST00000620787 C2CD4CQ8TF44 421 aa17.41■□□□□ 0.38
PDLIM3-212ENST00000620787 RNF133Q8WVZ7 376 aa17.41■□□□□ 0.38
PDLIM3-212ENST00000620787 ZNF775Q96BV0 537 aaPredicted RBP17.41■□□□□ 0.38
PDLIM3-212ENST00000620787 PDE7BQ9NP56 450 aa17.41■□□□□ 0.38
PDLIM3-212ENST00000620787 RP1P56715 2156 aa17.41■□□□□ 0.38
PDLIM3-212ENST00000620787 SPTY2D1-AS1A0A0U1RR47 76 aa17.4■□□□□ 0.38
PDLIM3-212ENST00000620787 TMEM150CB9EJG8 249 aa17.4■□□□□ 0.38
PDLIM3-212ENST00000620787 FTCDNL1E5RQL4 147 aa17.4■□□□□ 0.38
PDLIM3-212ENST00000620787 SFT2D2O95562 160 aa17.4■□□□□ 0.38
PDLIM3-212ENST00000620787 CTHP32929 405 aa17.4■□□□□ 0.38
PDLIM3-212ENST00000620787 TDGQ13569 410 aa17.4■□□□□ 0.38
PDLIM3-212ENST00000620787 RNF144BQ7Z419 303 aa17.4■□□□□ 0.38
PDLIM3-212ENST00000620787 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.4■□□□□ 0.38
PDLIM3-212ENST00000620787 AQP10Q96PS8 301 aa17.4■□□□□ 0.38
PDLIM3-212ENST00000620787 RHOFQ9HBH0 211 aa17.4■□□□□ 0.38
PDLIM3-212ENST00000620787 RAB18Q9NP72 206 aa17.4■□□□□ 0.38
PDLIM3-212ENST00000620787 PRR13Q9NZ81 148 aa17.4■□□□□ 0.38
PDLIM3-212ENST00000620787 FLVCR1Q9Y5Y0 555 aa17.4■□□□□ 0.38
PDLIM3-212ENST00000620787 CEACAM18A8MTB9 384 aa17.4■□□□□ 0.38
PDLIM3-212ENST00000620787 MS4A18H0YCH9 400 aa17.4■□□□□ 0.38
PDLIM3-212ENST00000620787 FARS2O95363 451 aaKnown RBP17.4■□□□□ 0.38
PDLIM3-212ENST00000620787 IGHV4-34P06331 123 aa17.4■□□□□ 0.38
PDLIM3-212ENST00000620787 CAPZBP47756 277 aa17.4■□□□□ 0.38
PDLIM3-212ENST00000620787 PLCXD2Q0VAA5 305 aa17.4■□□□□ 0.38
PDLIM3-212ENST00000620787 SLC9A3R2Q15599 337 aa17.4■□□□□ 0.38
PDLIM3-212ENST00000620787 MS4A18Q3C1V0 323 aa17.4■□□□□ 0.38
PDLIM3-212ENST00000620787 AWAT2Q6E213 333 aa17.4■□□□□ 0.38
PDLIM3-212ENST00000620787 ZNF529Q6P280 563 aa17.4■□□□□ 0.38
PDLIM3-212ENST00000620787 CLEC18BQ6UXF7 455 aa17.4■□□□□ 0.38
PDLIM3-212ENST00000620787 COX15Q7KZN9 410 aa17.4■□□□□ 0.38
PDLIM3-212ENST00000620787 GRINAQ7Z429 371 aa17.4■□□□□ 0.38
PDLIM3-212ENST00000620787 OR13C9Q8NGT0 318 aa17.4■□□□□ 0.38
PDLIM3-212ENST00000620787 CPNE2Q96FN4 548 aaPredicted RBP17.4■□□□□ 0.38
PDLIM3-212ENST00000620787 SMIM8Q96KF7 97 aa17.4■□□□□ 0.38
PDLIM3-212ENST00000620787 MICU1Q9BPX6 476 aa17.4■□□□□ 0.38
PDLIM3-212ENST00000620787 HRH4Q9H3N8 390 aa17.4■□□□□ 0.38
PDLIM3-212ENST00000620787 PCDH15Q96QU1 1955 aa17.39■□□□□ 0.38
PDLIM3-212ENST00000620787 IGKV3D-11A0A0A0MRZ8 115 aa17.39■□□□□ 0.38
PDLIM3-212ENST00000620787 A6NIZ1 184 aa17.39■□□□□ 0.38
PDLIM3-212ENST00000620787 MBTPS2O43462 519 aa17.39■□□□□ 0.38
PDLIM3-212ENST00000620787 SEMA4FO95754 770 aa17.39■□□□□ 0.38
PDLIM3-212ENST00000620787 ABCD3P28288 659 aa17.39■□□□□ 0.38
PDLIM3-212ENST00000620787 NPY4RP50391 375 aa17.39■□□□□ 0.38
PDLIM3-212ENST00000620787 CAV2P51636 162 aa17.39■□□□□ 0.38
PDLIM3-212ENST00000620787 EMP2P54851 167 aa17.39■□□□□ 0.38
PDLIM3-212ENST00000620787 RAP1BP61224 184 aa17.39■□□□□ 0.38
PDLIM3-212ENST00000620787 RAP1AP62834 184 aa17.39■□□□□ 0.38
PDLIM3-212ENST00000620787 DNM1P34Q6PK57 102 aa17.39■□□□□ 0.38
PDLIM3-212ENST00000620787 TMEM200AQ86VY9 491 aa17.39■□□□□ 0.38
PDLIM3-212ENST00000620787 ANGPTL5Q86XS5 388 aa17.39■□□□□ 0.38
PDLIM3-212ENST00000620787 ZFP82Q8N141 532 aa17.39■□□□□ 0.38
PDLIM3-212ENST00000620787 SFT2D1Q8WV19 159 aa17.39■□□□□ 0.38
PDLIM3-212ENST00000620787 SAT2Q96F10 170 aaPredicted RBP17.39■□□□□ 0.38
PDLIM3-212ENST00000620787 LPAR5Q9H1C0 372 aa17.39■□□□□ 0.38
PDLIM3-212ENST00000620787 MMACHCQ9Y4U1 282 aa17.39■□□□□ 0.38
PDLIM3-212ENST00000620787 PRAMEF26H0Y7S4 382 aa17.39■□□□□ 0.37
PDLIM3-212ENST00000620787 SYT7O43581 403 aa17.39■□□□□ 0.37
PDLIM3-212ENST00000620787 APOC1P02654 83 aa17.39■□□□□ 0.37
PDLIM3-212ENST00000620787 IFNA4P05014 189 aa17.39■□□□□ 0.37
PDLIM3-212ENST00000620787 EFNA3P52797 238 aa17.39■□□□□ 0.37
PDLIM3-212ENST00000620787 CLDN6P56747 220 aa17.39■□□□□ 0.37
PDLIM3-212ENST00000620787 DCAF7P61962 342 aa17.39■□□□□ 0.37
PDLIM3-212ENST00000620787 SUPT4H1P63272 117 aaKnown RBP17.39■□□□□ 0.37
PDLIM3-212ENST00000620787 VAX1Q5SQQ9 334 aa17.39■□□□□ 0.37
PDLIM3-212ENST00000620787 FAM109BQ6ICB4 259 aaPredicted RBP17.39■□□□□ 0.37
PDLIM3-212ENST00000620787 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.39■□□□□ 0.37
PDLIM3-212ENST00000620787 CYYR1Q96J86 154 aa17.39■□□□□ 0.37
PDLIM3-212ENST00000620787 KCNK17Q96T54 332 aa17.39■□□□□ 0.37
PDLIM3-212ENST00000620787 SLC5A7Q9GZV3 580 aa17.39■□□□□ 0.37
PDLIM3-212ENST00000620787 C10orf142B7Z368 130 aa17.38■□□□□ 0.37
PDLIM3-212ENST00000620787 ANKRD55Q3KP44 614 aa17.38■□□□□ 0.37
PDLIM3-212ENST00000620787 PLAC9Q5JTB6 97 aa17.38■□□□□ 0.37
PDLIM3-212ENST00000620787 SKA3Q8IX90 412 aa17.38■□□□□ 0.37
PDLIM3-212ENST00000620787 PBOV1Q9GZY1 135 aa17.38■□□□□ 0.37
PDLIM3-212ENST00000620787 OR2S2Q9NQN1 319 aa17.38■□□□□ 0.37
PDLIM3-212ENST00000620787 SOHLH2Q9NX45 425 aa17.38■□□□□ 0.37
PDLIM3-212ENST00000620787 PRSS44E7EML9 344 aa17.38■□□□□ 0.37
PDLIM3-212ENST00000620787 TO15178 435 aa17.38■□□□□ 0.37
PDLIM3-212ENST00000620787 OR1D4P47884 311 aa17.38■□□□□ 0.37
PDLIM3-212ENST00000620787 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.38■□□□□ 0.37
PDLIM3-212ENST00000620787 ZNF248Q8NDW4 579 aa17.38■□□□□ 0.37
PDLIM3-212ENST00000620787 OR51F2Q8NH61 342 aa17.38■□□□□ 0.37
PDLIM3-212ENST00000620787 OR10C1Q96KK4 312 aa17.38■□□□□ 0.37
PDLIM3-212ENST00000620787 NPIPA5E9PKD4 350 aa17.37■□□□□ 0.37
PDLIM3-212ENST00000620787 LINC01387J3KSC0 135 aa17.37■□□□□ 0.37
PDLIM3-212ENST00000620787 LINC01565O15544 149 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms