RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 SDR39U1Q9NRG7 319 aaPredicted RBP3.69□□□□□ -1.82
SNCA-213ENST00000618500 ANGPT4Q9Y264 503 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 ARHGAP32A7KAX9 2087 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 PLECQ15149 4684 aaKnown RBP3.69□□□□□ -1.82
SNCA-213ENST00000618500 NBEAL2Q6ZNJ1 2754 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 STARD9Q9P2P6 4700 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 IGKV1D-43A0A0B4J1Z2 117 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.68□□□□□ -1.82
SNCA-213ENST00000618500 FAM90A22PA8MWA6 464 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 C5orf58C9J3I9 102 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 C11orf98E9PRG8 122 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 F5H5P2 479 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 JTBO76095 146 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 SLC2A10O95528 541 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 TXNDC12O95881 172 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 VSIG10L2P0DP72 767 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 MSX2P35548 267 aaPredicted RBP3.68□□□□□ -1.82
SNCA-213ENST00000618500 RPL4P36578 427 aaKnown RBP3.68□□□□□ -1.82
SNCA-213ENST00000618500 RPL14P50914 215 aaKnown RBP3.68□□□□□ -1.82
SNCA-213ENST00000618500 MRPS25P82663 173 aaKnown RBP3.68□□□□□ -1.82
SNCA-213ENST00000618500 MINOS1Q5TGZ0 78 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 FAM90A1Q86YD7 464 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 GCSAMQ8N6F7 178 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 CCDC63Q8NA47 563 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 SLC26A10Q8NG04 563 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 IL17DQ8TAD2 202 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 RAB3IPQ96QF0 476 aaPredicted RBP3.68□□□□□ -1.82
SNCA-213ENST00000618500 GRPEL1Q9HAV7 217 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 PTTG3PQ9NZH4 202 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 MINOS1-NBL1R4GNA1 71 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 IGLV1-36A0A0B4J1U3 117 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 TMEM210A6NLX4 147 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 H3BUI4 141 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 SIGLEC5O15389 551 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 CH25HO95992 272 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 PF4P02776 101 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 ACSM4P0C7M7 580 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 KRT4P19013 534 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 NOS3P29474 1203 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 CASQ1P31415 396 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 NAA10P41227 235 aaPredicted RBP3.68□□□□□ -1.82
SNCA-213ENST00000618500 GUCA1AP43080 201 aaPredicted RBP3.68□□□□□ -1.82
SNCA-213ENST00000618500 ABCE1P61221 599 aaKnown RBP3.68□□□□□ -1.82
SNCA-213ENST00000618500 UFM1P61960 85 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 ARF6P62330 175 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 CDK6Q00534 326 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 SGCAQ16586 387 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 LRRC10Q5BKY1 277 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 ENTPD8Q5MY95 495 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 C9orf66Q5T8R8 295 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 ZNF788Q6ZQV5 615 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 ADCK1Q86TW2 530 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 ARMC8Q8IUR7 673 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 OR11H6Q8NGC7 330 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 RPS4Y2Q8TD47 263 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 GTF2H4Q92759 462 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 MALSU1Q96EH3 234 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 SORT1Q99523 831 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 P2RX4Q99571 388 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 MCHR1Q99705 422 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 TOR3AQ9H497 397 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 KCNK9Q9NPC2 374 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 MEPEQ9NQ76 525 aaPredicted RBP3.68□□□□□ -1.82
SNCA-213ENST00000618500 SIGLEC9Q9Y336 463 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 FIS1Q9Y3D6 152 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 TRPC5OSA6NMA1 111 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 SDHDO14521 159 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 IMPA2O14732 288 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 HDAC3O15379 428 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 NDUFB3O43676 98 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 TYROBPO43914 113 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 GLCEO94923 617 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 CCNOP22674 350 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 CBLP22681 906 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 OTX1P32242 354 aaPredicted RBP3.68□□□□□ -1.82
SNCA-213ENST00000618500 CDAP32320 146 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 DDOSTP39656 456 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 KIR3DL2P43630 455 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 THBS3P49746 956 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 INSL3P51460 131 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 SLC7A5Q01650 507 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 MALLQ13021 153 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 FHL1Q13642 323 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 SELPLGQ14242 412 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 OR8G1Q15617 311 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 PCK2Q16822 640 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 DEFB121Q5J5C9 76 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 ZNF771Q7L3S4 317 aaPredicted RBP3.68□□□□□ -1.82
SNCA-213ENST00000618500 PATL1Q86TB9 770 aaKnown RBP3.68□□□□□ -1.82
SNCA-213ENST00000618500 MRPL41Q8IXM3 137 aaKnown RBP3.68□□□□□ -1.82
SNCA-213ENST00000618500 IFT20Q8IY31 132 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 C10orf53Q8N6V4 93 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 RNF152Q8N8N0 203 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 OR10AD1Q8NGE0 317 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 OR4X2Q8NGF9 303 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 TM2D3Q9BRN9 247 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 ADAT1Q9BUB4 502 aaKnown RBP3.68□□□□□ -1.82
SNCA-213ENST00000618500 RSRP1Q9BUV0 290 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 TMEM109Q9BVC6 243 aa3.68□□□□□ -1.82
SNCA-213ENST00000618500 HEXA-AS1Q9H8Q6 139 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms