RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 ABHD6Q9BV23 337 aa13.53□□□□□ -0.24
BRCA1-228ENST00000618469 OAZ3Q9UMX2 235 aa13.53□□□□□ -0.24
BRCA1-228ENST00000618469 N6AMT1Q9Y5N5 214 aa13.53□□□□□ -0.24
BRCA1-228ENST00000618469 ISPDA4D126 451 aa13.52□□□□□ -0.25
BRCA1-228ENST00000618469 C5orf63A6NC05 138 aa13.52□□□□□ -0.25
BRCA1-228ENST00000618469 SAC3D1A6NKF1 404 aa13.52□□□□□ -0.25
BRCA1-228ENST00000618469 M0R129 80 aa13.52□□□□□ -0.25
BRCA1-228ENST00000618469 MLNRO43193 412 aa13.52□□□□□ -0.25
BRCA1-228ENST00000618469 SLC2A5P22732 501 aa13.52□□□□□ -0.25
BRCA1-228ENST00000618469 SLC15A1P46059 708 aa13.52□□□□□ -0.25
BRCA1-228ENST00000618469 ACTR3P61158 418 aa13.52□□□□□ -0.25
BRCA1-228ENST00000618469 SLC3A1Q07837 685 aa13.52□□□□□ -0.25
BRCA1-228ENST00000618469 APOFQ13790 326 aa13.52□□□□□ -0.25
BRCA1-228ENST00000618469 SLC35D3Q5M8T2 416 aa13.52□□□□□ -0.25
BRCA1-228ENST00000618469 GLYATL3Q5SZD4 288 aa13.52□□□□□ -0.25
BRCA1-228ENST00000618469 KDM4DQ6B0I6 523 aa13.52□□□□□ -0.25
BRCA1-228ENST00000618469 ZNF771Q7L3S4 317 aaPredicted RBP13.52□□□□□ -0.25
BRCA1-228ENST00000618469 OR13G1Q8NGZ3 307 aa13.52□□□□□ -0.25
BRCA1-228ENST00000618469 RNF133Q8WVZ7 376 aa13.52□□□□□ -0.25
BRCA1-228ENST00000618469 RAB1CQ92928 201 aa13.52□□□□□ -0.25
BRCA1-228ENST00000618469 CENPNQ96H22 339 aaPredicted RBP13.52□□□□□ -0.25
BRCA1-228ENST00000618469 LPAR2Q9HBW0 351 aa13.52□□□□□ -0.25
BRCA1-228ENST00000618469 TMEM160Q9NX00 188 aa13.52□□□□□ -0.25
BRCA1-228ENST00000618469 DCAF16Q9NXF7 216 aa13.52□□□□□ -0.25
BRCA1-228ENST00000618469 DNAJC27Q9NZQ0 273 aa13.52□□□□□ -0.25
BRCA1-228ENST00000618469 IL19Q9UHD0 177 aa13.52□□□□□ -0.25
BRCA1-228ENST00000618469 FAM157AC9JC47 383 aa13.51□□□□□ -0.25
BRCA1-228ENST00000618469 H0YL77 283 aa13.51□□□□□ -0.25
BRCA1-228ENST00000618469 TBX1O43435 398 aa13.51□□□□□ -0.25
BRCA1-228ENST00000618469 PRKYO43930 277 aa13.51□□□□□ -0.25
BRCA1-228ENST00000618469 ANXA2P07355 339 aaKnown RBP13.51□□□□□ -0.25
BRCA1-228ENST00000618469 LYNP07948 512 aa13.51□□□□□ -0.25
BRCA1-228ENST00000618469 EPHA2P29317 976 aa13.51□□□□□ -0.25
BRCA1-228ENST00000618469 RBMXP38159 391 aaKnown RBP13.51□□□□□ -0.25
BRCA1-228ENST00000618469 ZNF92Q03936 586 aa13.51□□□□□ -0.25
BRCA1-228ENST00000618469 LCN1P1Q5VSP4 162 aa13.51□□□□□ -0.25
BRCA1-228ENST00000618469 PEG10Q86TG7 708 aaKnown RBP13.51□□□□□ -0.25
BRCA1-228ENST00000618469 OTOSQ8NHW6 89 aa13.51□□□□□ -0.25
BRCA1-228ENST00000618469 SPRYD4Q8WW59 207 aaPredicted RBP13.51□□□□□ -0.25
BRCA1-228ENST00000618469 CIB1Q99828 191 aa13.51□□□□□ -0.25
BRCA1-228ENST00000618469 GAL3ST1Q99999 423 aa13.51□□□□□ -0.25
BRCA1-228ENST00000618469 SLC30A2Q9BRI3 323 aa13.51□□□□□ -0.25
BRCA1-228ENST00000618469 SHARPINQ9H0F6 387 aa13.51□□□□□ -0.25
BRCA1-228ENST00000618469 TOR3AQ9H497 397 aa13.51□□□□□ -0.25
BRCA1-228ENST00000618469 TMEM106BQ9NUM4 274 aa13.51□□□□□ -0.25
BRCA1-228ENST00000618469 ENOPH1Q9UHY7 261 aa13.51□□□□□ -0.25
BRCA1-228ENST00000618469 PPP1R3CQ9UQK1 317 aa13.51□□□□□ -0.25
BRCA1-228ENST00000618469 DYSFO75923 2080 aa13.51□□□□□ -0.25
BRCA1-228ENST00000618469 IGHV3-64DA0A0J9YX35 117 aa13.5□□□□□ -0.25
BRCA1-228ENST00000618469 ZAR1LA6NP61 321 aa13.5□□□□□ -0.25
BRCA1-228ENST00000618469 B4DSR2 109 aa13.5□□□□□ -0.25
BRCA1-228ENST00000618469 F5H5P2 479 aa13.5□□□□□ -0.25
BRCA1-228ENST00000618469 HLA-DPB1P04440 258 aa13.5□□□□□ -0.25
BRCA1-228ENST00000618469 MRPL3P09001 348 aaKnown RBP13.5□□□□□ -0.25
BRCA1-228ENST00000618469 H2BFMP0C1H6 154 aa13.5□□□□□ -0.25
BRCA1-228ENST00000618469 OPRL1P41146 370 aa13.5□□□□□ -0.25
BRCA1-228ENST00000618469 MMP16P51512 607 aa13.5□□□□□ -0.25
BRCA1-228ENST00000618469 SLX4IPQ5VYV7 408 aa13.5□□□□□ -0.25
BRCA1-228ENST00000618469 ZNF454Q8N9F8 522 aa13.5□□□□□ -0.25
BRCA1-228ENST00000618469 THEM6Q8WUY1 208 aa13.5□□□□□ -0.25
BRCA1-228ENST00000618469 RAB39BQ96DA2 213 aa13.5□□□□□ -0.25
BRCA1-228ENST00000618469 C1orf159Q96HA4 380 aa13.5□□□□□ -0.25
BRCA1-228ENST00000618469 MEGF10Q96KG7 1140 aa13.5□□□□□ -0.25
BRCA1-228ENST00000618469 RIBC2Q9H4K1 309 aa13.5□□□□□ -0.25
BRCA1-228ENST00000618469 ZNF665Q9H7R5 613 aa13.5□□□□□ -0.25
BRCA1-228ENST00000618469 TMEM100Q9NV29 134 aa13.5□□□□□ -0.25
BRCA1-228ENST00000618469 LPAR3Q9UBY5 353 aa13.5□□□□□ -0.25
BRCA1-228ENST00000618469 TMEFF2Q9UIK5 374 aaPredicted RBP13.5□□□□□ -0.25
BRCA1-228ENST00000618469 KLHDC2Q9Y2U9 406 aa13.5□□□□□ -0.25
BRCA1-228ENST00000618469 SVEP1Q4LDE5 3571 aa13.5□□□□□ -0.25
BRCA1-228ENST00000618469 CCDC182A6NF36 153 aa13.49□□□□□ -0.25
BRCA1-228ENST00000618469 GGT3PA6NGU5 568 aa13.49□□□□□ -0.25
BRCA1-228ENST00000618469 CD300LBA8K4G0 201 aa13.49□□□□□ -0.25
BRCA1-228ENST00000618469 XRCC2O43543 280 aa13.49□□□□□ -0.25
BRCA1-228ENST00000618469 SRP9P49458 86 aaKnown RBP13.49□□□□□ -0.25
BRCA1-228ENST00000618469 RAD23AP54725 363 aa13.49□□□□□ -0.25
BRCA1-228ENST00000618469 ZNF121P58317 390 aaPredicted RBP13.49□□□□□ -0.25
BRCA1-228ENST00000618469 LMO4P61968 165 aa13.49□□□□□ -0.25
BRCA1-228ENST00000618469 TIGD6Q17RP2 521 aa13.49□□□□□ -0.25
BRCA1-228ENST00000618469 CR1LQ2VPA4 569 aa13.49□□□□□ -0.25
BRCA1-228ENST00000618469 GFOD2Q3B7J2 385 aa13.49□□□□□ -0.25
BRCA1-228ENST00000618469 FAM120AOSQ5T036 256 aa13.49□□□□□ -0.25
BRCA1-228ENST00000618469 C12orf73Q69YU5 71 aa13.49□□□□□ -0.25
BRCA1-228ENST00000618469 GLCCI1Q86VQ1 547 aa13.49□□□□□ -0.25
BRCA1-228ENST00000618469 TCEANCQ8N8B7 351 aa13.49□□□□□ -0.25
BRCA1-228ENST00000618469 ZNF420Q8TAQ5 688 aaPredicted RBP13.49□□□□□ -0.25
BRCA1-228ENST00000618469 PKP2Q99959 881 aa13.49□□□□□ -0.25
BRCA1-228ENST00000618469 ADAT1Q9BUB4 502 aaKnown RBP13.49□□□□□ -0.25
BRCA1-228ENST00000618469 OPA3Q9H6K4 179 aa13.49□□□□□ -0.25
BRCA1-228ENST00000618469 BRD7Q9NPI1 651 aa13.49□□□□□ -0.25
BRCA1-228ENST00000618469 UBAP1Q9NZ09 502 aa13.49□□□□□ -0.25
BRCA1-228ENST00000618469 LAMP5Q9UJQ1 280 aa13.49□□□□□ -0.25
BRCA1-228ENST00000618469 NPTNQ9Y639 398 aa13.49□□□□□ -0.25
BRCA1-228ENST00000618469 H3BNX3 289 aa13.48□□□□□ -0.25
BRCA1-228ENST00000618469 IGHV2-70P01814 119 aa13.48□□□□□ -0.25
BRCA1-228ENST00000618469 IGHV2-5P01817 119 aa13.48□□□□□ -0.25
BRCA1-228ENST00000618469 APOC1P02654 83 aa13.48□□□□□ -0.25
BRCA1-228ENST00000618469 MSMBP08118 114 aa13.48□□□□□ -0.25
BRCA1-228ENST00000618469 SRD5A1P18405 259 aa13.48□□□□□ -0.25
BRCA1-228ENST00000618469 HNF1AP20823 631 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms