RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 GPX8Q8TED1 209 aa10.15□□□□□ -0.79
CCDC144B-208ENST00000618081 NIPSNAP1Q9BPW8 284 aa10.15□□□□□ -0.79
CCDC144B-208ENST00000618081 PRSS37A4D1T9 235 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 SPI1P17947 270 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 PPICP45877 212 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 PPP1CAP62136 330 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 CDK5Q00535 292 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 TMEM81Q6P7N7 255 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 MOB3BQ86TA1 216 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 Q8IYB0 196 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 C14orf79Q96F83 325 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 FRG2CA6NGY1 282 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 HPP00738 406 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 T-ENOLP0DO92 83 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 COX5AP20674 150 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 ACOXLQ9NUZ1 547 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 R4GMQ9 66 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 HMGN4O00479 90 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 SBK2P0C263 348 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 RRASP10301 218 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 CBR1P16152 277 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 SYT14P1Q58G82 188 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 TMEM65Q6PI78 240 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 ANKRD33Q7Z3H0 272 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 ASB13Q8WXK3 278 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 TXNIPQ9H3M7 391 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 FBXO34Q9NWN3 711 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 SULT1C4O75897 302 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 OR2J3O76001 311 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 CASP3P42574 277 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 GPM6AP51674 278 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 PTTG1IPP53801 180 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 ZNF385BQ569K4 471 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 SLCO4A1Q96BD0 722 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 FKBP11Q9NYL4 201 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 ARL2-SNX15V9GYD0 113 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 OR2M5A3KFT3 312 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 G3V3Q6 166 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 ETFRF1Q6IPR1 90 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 DDOQ99489 341 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 PECRQ9BY49 303 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 PATJQ8NI35 1801 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 H3F3AP84243 136 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 ZNF485Q8NCK3 441 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 ST8SIA4Q92187 359 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 ARSGQ96EG1 525 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 TEAD3Q99594 435 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 OR51I2Q9H344 312 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 KLKB1P03952 638 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 APEHP13798 732 aaKnown RBP10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 FGF7P21781 194 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 GPR32P1Q8NGA4 272 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 LILRB4Q8NHJ6 448 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 SCARB1Q8WTV0 552 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 A3GALT2U3KPV4 340 aa10.14□□□□□ -0.79
CCDC144B-208ENST00000618081 UMAD1C9J7I0 102 aa10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 H0Y8X5 98 aa10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 APEX1P27695 318 aaKnown RBP10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 BTG1P62324 171 aa10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 SHBQ15464 509 aa10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 HAGHQ16775 308 aa10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 PELI1Q96FA3 418 aa10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 TAAR9Q96RI9 348 aa10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 ASIC5Q9NY37 505 aa10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 CCDC187A0A096LP49 1063 aa10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 NME2P1O60361 137 aa10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 LALBAP00709 142 aa10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 HFEQ30201 348 aa10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 OTUD1Q5VV17 481 aaPredicted RBP10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 RPL3LQ92901 407 aaKnown RBP10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 AMMECR1Q9Y4X0 333 aaPredicted RBP10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 SPTBN1Q01082 2364 aaKnown RBP10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 OR2B11Q5JQS5 317 aa10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 FAM122BQ7Z309 247 aa10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 DTWD2Q8NBA8 298 aa10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 SLC7A6Q92536 515 aa10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 MBNL1Q9NR56 388 aaKnown RBP10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 IGHV3-15A0A0B4J1V0 119 aa10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 H7BYZ3 331 aa10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 PDGFBP01127 241 aaPredicted RBP10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 NTF3P20783 257 aa10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 SLC19A1P41440 591 aa10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 PIGPP57054 158 aa10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 ZNF239Q16600 458 aaKnown RBP10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 Q1RN00 199 aa10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 TRMT12Q53H54 448 aaKnown RBP10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 ZFP62Q8NB50 900 aaPredicted RBP10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 SMIM19Q96E16 107 aa10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 KPTNQ9Y664 436 aa10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 TMEM202A6NGA9 273 aa10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 NDUFB3O43676 98 aa10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 GIPP09681 153 aaPredicted RBP10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 RPL7P18124 248 aaKnown RBP10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 GPX2P18283 190 aa10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 MMP11P24347 488 aa10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 PNLIPRP2P54317 469 aa10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 CLDN15P56746 228 aa10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 FOXC1Q12948 553 aa10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 LIPNQ5VXI9 398 aa10.13□□□□□ -0.79
CCDC144B-208ENST00000618081 ACOT7LQ6ZUV0 252 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms