RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 IFNA21P01568 189 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 MDKP21741 143 aaPredicted RBP5.97□□□□□ -1.45
LMO3-235ENST00000616247 OMGP23515 440 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 CX3CR1P49238 355 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 ADPRHP54922 357 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 GAMTQ14353 236 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 RHEBQ15382 184 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 SURF2Q15527 256 aaPredicted RBP5.97□□□□□ -1.45
LMO3-235ENST00000616247 ZNF74Q16587 644 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 HAGHQ16775 308 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 PRICKLE4Q2TBC4 344 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 TMEM128Q5BJH2 165 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 TMEM244Q5VVB8 128 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 EXD3Q8N9H8 876 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 TERB2Q8NHR7 220 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 SLC25A43Q8WUT9 341 aaPredicted RBP5.97□□□□□ -1.45
LMO3-235ENST00000616247 FAM3CQ92520 227 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 RNF166Q96A37 237 aaPredicted RBP5.97□□□□□ -1.45
LMO3-235ENST00000616247 COX14Q96I36 57 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 FAM71F1Q96KD3 344 aaPredicted RBP5.97□□□□□ -1.45
LMO3-235ENST00000616247 LRRC3BQ96PB8 259 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 DGAT2Q96PD7 388 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 TGM7Q96PF1 710 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 NICN1Q9BSH3 213 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 ZNF426Q9BUY5 554 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 OR8D2Q9GZM6 311 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 PTGES2Q9H7Z7 377 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 PDE7BQ9NP56 450 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 FAM212BQ9NTI7 297 aaPredicted RBP5.97□□□□□ -1.45
LMO3-235ENST00000616247 RHBDD3Q9Y3P4 386 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 DNAH14Q0VDD8 3507 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 TSTD3H0UI37 97 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 SYT7O43581 403 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 CD1AP06126 327 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 HEXAP06865 529 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 ZNF20P17024 532 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 CEBPBP17676 345 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 TMEM33P57088 247 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 TAS2R31P59538 309 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 UBE2KP61086 200 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 SSTP61278 116 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 BTG2P78543 158 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 ZNF124Q15973 351 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 SP6Q3SY56 376 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 RPUSD3Q6P087 351 aaKnown RBP5.97□□□□□ -1.45
LMO3-235ENST00000616247 KLHL24Q6TFL4 600 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 ANKRD33Q7Z3H0 272 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 OOSP2Q86WS3 158 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 C17orf78Q8N4C9 275 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 OR1J1Q8NGS3 322 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 FNDC9Q8TBE3 224 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 ADAMTS17Q8TE56 1095 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 SAT2Q96F10 170 aaPredicted RBP5.97□□□□□ -1.45
LMO3-235ENST00000616247 ZFYVE21Q9BQ24 234 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 NMNAT2Q9BZQ4 307 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 NELFAQ9H3P2 528 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 PNO1Q9NRX1 252 aaKnown RBP5.97□□□□□ -1.45
LMO3-235ENST00000616247 HRASLS2Q9NWW9 162 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 TREM2Q9NZC2 230 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 DOK5Q9P104 306 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 C14orf166Q9Y224 244 aaKnown RBP5.97□□□□□ -1.45
LMO3-235ENST00000616247 YBX2Q9Y2T7 364 aaKnown RBP5.97□□□□□ -1.45
LMO3-235ENST00000616247 LRP12Q9Y561 859 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 DMRT1Q9Y5R6 373 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 FLVCR1Q9Y5Y0 555 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 B3GALT1Q9Y5Z6 326 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 VCANP13611 3396 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 A0A1W2PP11 408 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 OTOL1A6NHN0 477 aaPredicted RBP5.97□□□□□ -1.45
LMO3-235ENST00000616247 ZNF726A6NNF4 738 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 ST8SIA5O15466 376 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 CYB5BO43169 146 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 MOSPD3O75425 235 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 AHSA1O95433 338 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 RPS4Y1P22090 263 aaKnown RBP5.97□□□□□ -1.45
LMO3-235ENST00000616247 TUBG1P23258 451 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 CST5P28325 142 aaPredicted RBP5.97□□□□□ -1.45
LMO3-235ENST00000616247 DHPSP49366 369 aaPredicted RBP5.97□□□□□ -1.45
LMO3-235ENST00000616247 SSBP1Q04837 148 aaKnown RBP5.97□□□□□ -1.45
LMO3-235ENST00000616247 EGR3Q06889 387 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 CCINQ13939 588 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 ACKR1Q16570 336 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 ANKRD55Q3KP44 614 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 C2orf27AQ580R0 203 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 ZNF684Q5T5D7 378 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 GFI1BQ5VTD9 330 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 NSUN5P2Q63ZY6 315 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 PTCRAQ6ISU1 281 aaPredicted RBP5.97□□□□□ -1.45
LMO3-235ENST00000616247 TMEM182Q6ZP80 229 aaPredicted RBP5.97□□□□□ -1.45
LMO3-235ENST00000616247 DCXRQ7Z4W1 244 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 DPPA2Q7Z7J5 298 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 DMRTC2Q8IXT2 367 aaPredicted RBP5.97□□□□□ -1.45
LMO3-235ENST00000616247 ZDHHC22Q8N966 263 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 RNF128Q8TEB7 428 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 WFIKKN2Q8TEU8 576 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 C2orf50Q96LR7 162 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 OR11A1Q9GZK7 315 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 MMP25Q9NPA2 562 aa5.97□□□□□ -1.45
LMO3-235ENST00000616247 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.97□□□□□ -1.45
LMO3-235ENST00000616247 PPP4R1LQ9P1A2 415 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms