RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 H2AFB1P0C5Y9 115 aa11.5□□□□□ -0.57
TCF4-248ENST00000616053 COX5AP20674 150 aa11.5□□□□□ -0.57
TCF4-248ENST00000616053 KRTDAPP60985 99 aa11.5□□□□□ -0.57
TCF4-248ENST00000616053 AMIGO3Q86WK7 504 aa11.5□□□□□ -0.57
TCF4-248ENST00000616053 RPUSD4Q96CM3 377 aaKnown RBP11.5□□□□□ -0.57
TCF4-248ENST00000616053 PIK3IP1Q96FE7 263 aa11.5□□□□□ -0.57
TCF4-248ENST00000616053 FETUBQ9UGM5 382 aa11.5□□□□□ -0.57
TCF4-248ENST00000616053 MRPS16Q9Y3D3 137 aaKnown RBP11.5□□□□□ -0.57
TCF4-248ENST00000616053 PRDM15P57071 1507 aaPredicted RBP11.5□□□□□ -0.57
TCF4-248ENST00000616053 SMPD2O60906 423 aa11.5□□□□□ -0.57
TCF4-248ENST00000616053 GYPAP02724 150 aa11.5□□□□□ -0.57
TCF4-248ENST00000616053 SELENOWP63302 87 aa11.5□□□□□ -0.57
TCF4-248ENST00000616053 PRDX1Q06830 199 aaKnown RBP11.5□□□□□ -0.57
TCF4-248ENST00000616053 RBMS2Q15434 407 aaKnown RBP11.5□□□□□ -0.57
TCF4-248ENST00000616053 TMEM182Q6ZP80 229 aaPredicted RBP11.5□□□□□ -0.57
TCF4-248ENST00000616053 RFPL4BQ6ZWI9 263 aa11.5□□□□□ -0.57
TCF4-248ENST00000616053 P2RX4Q99571 388 aa11.5□□□□□ -0.57
TCF4-248ENST00000616053 SEMG1P04279 462 aa11.5□□□□□ -0.57
TCF4-248ENST00000616053 CLEC12BQ2HXU8 276 aa11.5□□□□□ -0.57
TCF4-248ENST00000616053 LCN15Q6UWW0 184 aa11.5□□□□□ -0.57
TCF4-248ENST00000616053 ZNF784Q8NCA9 323 aaPredicted RBP11.5□□□□□ -0.57
TCF4-248ENST00000616053 MEGF10Q96KG7 1140 aa11.5□□□□□ -0.57
TCF4-248ENST00000616053 QRSL1Q9H0R6 528 aaKnown RBP11.5□□□□□ -0.57
TCF4-248ENST00000616053 PRSS2P07478 247 aa11.5□□□□□ -0.57
TCF4-248ENST00000616053 KCNJ3P48549 501 aa11.5□□□□□ -0.57
TCF4-248ENST00000616053 CDKN2DP55273 166 aa11.5□□□□□ -0.57
TCF4-248ENST00000616053 ZNF239Q16600 458 aaKnown RBP11.5□□□□□ -0.57
TCF4-248ENST00000616053 ANKRD60Q9BZ19 345 aa11.5□□□□□ -0.57
TCF4-248ENST00000616053 MYF5P13349 255 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 HLA-BQ31612 363 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 OR1B1Q8NGR6 318 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 TMEM106AQ96A25 262 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 PAAF1Q9BRP4 392 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 PIMREGQ9BSJ6 248 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 CDK5RAP2Q96SN8 1893 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 MEGF6O75095 1541 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 LOXHD1Q8IVV2 1947 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 ACOD1A6NK06 481 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 GFYI3L273 518 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 SELENBP1Q13228 472 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 PARM1Q6UWI2 310 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 OR10K1Q8NGX5 313 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 YIPF5Q969M3 257 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 GABRG3Q99928 467 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 TMPRSS2O15393 492 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 KIAA1024LP59773 190 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 PGGHGQ32M88 737 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 HTR3DQ70Z44 454 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 CENPVQ7Z7K6 275 aaPredicted RBP11.49□□□□□ -0.57
TCF4-248ENST00000616053 OR5D13Q8NGL4 314 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 S1PR5Q9H228 398 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 PSENENQ9NZ42 101 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 ANXA10Q9UJ72 324 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 UGT2A1Q9Y4X1 527 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 FLVCR1Q9Y5Y0 555 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 A0A1W2PR80 420 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 C3orf80F5H4A9 247 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 NME2P1O60361 137 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 HIST1H1EP10412 219 aaKnown RBP11.49□□□□□ -0.57
TCF4-248ENST00000616053 ORM2P19652 201 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 C1orf210Q8IVY1 113 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.49□□□□□ -0.57
TCF4-248ENST00000616053 PLA2G12AQ9BZM1 189 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 EXOSC3Q9NQT5 275 aaKnown RBP11.49□□□□□ -0.57
TCF4-248ENST00000616053 COA3Q9Y2R0 106 aaPredicted RBP11.49□□□□□ -0.57
TCF4-248ENST00000616053 OR2J2O76002 312 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 GLYATL3Q5SZD4 288 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 CHCHD4Q8N4Q1 142 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 KHSRPQ92945 711 aaKnown RBP eCLIP11.49□□□□□ -0.572e-6■■■□□ 17.4
TCF4-248ENST00000616053 TGIF2Q9GZN2 237 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 PRSS16Q9NQE7 514 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 TRAV38-1A0A0B4J264 116 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 TMEM30CPA0ZSE6 113 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 HSBP1O75506 76 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 MT-ATP6P00846 226 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 ADRA2CP18825 462 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 ETV1P50549 477 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 ELFN2Q5R3F8 820 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 HES3Q5TGS1 186 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 CD276Q5ZPR3 534 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 OR52H1Q8NGJ2 320 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 JAM3Q9BX67 310 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 GPR87Q9BY21 358 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 POFUT1Q9H488 388 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 MBD1Q9UIS9 605 aaPredicted RBP11.49□□□□□ -0.57
TCF4-248ENST00000616053 TBX19O60806 448 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 TMPRSS3P57727 454 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 BTN1A1Q13410 526 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 KCNRGQ8N5I3 272 aa11.49□□□□□ -0.57
TCF4-248ENST00000616053 ZMAT3Q9HA38 289 aaKnown RBP11.49□□□□□ -0.57
TCF4-248ENST00000616053 GFRA3O60609 400 aa11.48□□□□□ -0.57
TCF4-248ENST00000616053 CTNSO60931 367 aa11.48□□□□□ -0.57
TCF4-248ENST00000616053 ZNF623O75123 536 aa11.48□□□□□ -0.57
TCF4-248ENST00000616053 GIPRP48546 466 aa11.48□□□□□ -0.57
TCF4-248ENST00000616053 TM4SF20Q53R12 229 aa11.48□□□□□ -0.57
TCF4-248ENST00000616053 D2HGDHQ8N465 521 aa11.48□□□□□ -0.57
TCF4-248ENST00000616053 SYT8Q8NBV8 401 aa11.48□□□□□ -0.57
TCF4-248ENST00000616053 RANBP9Q96S59 729 aa11.48□□□□□ -0.57
TCF4-248ENST00000616053 C6orf106Q9H6K1 298 aaPredicted RBP11.48□□□□□ -0.57
TCF4-248ENST00000616053 KRBA1A5PL33 1030 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms