RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 IFNA2P01563 188 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 TPT1P13693 172 aaKnown RBP7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 IRF2P14316 349 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 MKXQ8IYA7 352 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 SLC25A45Q8N413 288 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 OR52N4Q8NGI2 321 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 TMPRSS13Q9BYE2 586 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 NECAP2Q9NVZ3 263 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 SLC23A1Q9UHI7 598 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 TRAPPC2LQ9UL33 140 aa7.99□□□□□ -1.13
PDLIM5-222ENST00000615540 LINC00271P0C7V0 271 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 NME2P22392 152 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 OPRM1P35372 400 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 INPP5JQ15735 1006 aaPredicted RBP7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 NHLRC1Q6VVB1 395 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 CMTM1Q8IZ96 169 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 MARCH1Q8TCQ1 289 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 SMIM4Q8WVI0 70 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 EMG1Q92979 244 aaKnown RBP7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 PRR13Q9NZ81 148 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 DNAJB11Q9UBS4 358 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 ST6GALNAC2Q9UJ37 374 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 TIMM10BQ9Y5J6 103 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 BPNT1O95861 308 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 OR4E1P0C645 316 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 MPLP40238 635 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 RHBDD2Q6NTF9 364 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 PRSS42Q7Z5A4 293 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 SCARF2Q96GP6 870 aaPredicted RBP7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 TAAR9Q96RI9 348 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 HINT2Q9BX68 163 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 B3GNT2Q9NY97 397 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 CSAG2Q9Y5P2 127 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 DSPPQ9NZW4 1301 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 CTAG2O75638 210 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 ETV6P41212 452 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 GPM6AP51674 278 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 NANOS3P60323 173 aaKnown RBP7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 IL10RAQ13651 578 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 KRBOX4Q5JUW0 171 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 PRSS35Q8N3Z0 413 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 OR5M9Q8NGP3 310 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 OR10R2Q8NGX6 335 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 RNF128Q8TEB7 428 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 KCNE4Q8WWG9 221 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 C1orf123Q9NWV4 160 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 QPCTLQ9NXS2 382 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 TGFBR3LH3BV60 316 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 SELENOVP59797 346 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 MGAT2Q10469 447 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 ZNF774Q6NX45 483 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 OR51A2Q8NGJ7 313 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 PCED1AQ9H1Q7 454 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 CNTD2Q9H8S5 307 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 TCRBV16S1A1N1A0A5B0 115 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 SMIM10L1P0DMW3 83 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 SERPINF1P36955 418 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 GPR157Q5UAW9 335 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 SMIM10Q96HG1 83 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 C4orf45Q96LM5 186 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 SNX18Q96RF0 628 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 FZR1Q9UM11 496 aa7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 MRPS18BQ9Y676 258 aaKnown RBP7.98□□□□□ -1.13
PDLIM5-222ENST00000615540 MN1Q10571 1320 aaPredicted RBP7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 D6RAR5 112 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 SIRPB1O00241 398 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 GLSO94925 669 aaPredicted RBP7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 NRASP01111 189 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 SELENOPP49908 381 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 CYCSP99999 105 aaKnown RBP7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 BTN1A1Q13410 526 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 TBC1D28Q2M2D7 210 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 ZNF658BQ4V348 819 aaPredicted RBP7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 ACTBL2Q562R1 376 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 GVQW1Q8N7I0 195 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 OR2V1Q8NHB1 315 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 TTC9Q92623 222 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 NELFAQ9H3P2 528 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 GLTPQ9NZD2 209 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 CBR3O75828 277 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 CCL3P10147 92 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 LTBRP36941 435 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 SUMO3P55854 103 aaPredicted RBP7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 SLC25A30Q5SVS4 291 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 AADACL3Q5VUY0 350 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 OR9K2Q8NGE7 335 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 RRNAD1Q96FB5 475 aaKnown RBP7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 RASL10BQ96S79 203 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 NICN1Q9BSH3 213 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 MTCL1Q9Y4B5 1905 aaKnown RBP7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 SERPINE2P07093 398 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 CPT2P23786 658 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 S100A11P31949 105 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 CEACAM16Q2WEN9 425 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 TMEM217Q8N7C4 229 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 ZNF501Q96CX3 271 aaPredicted RBP7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 ICAM5Q9UMF0 924 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 TRAV8-7A0A075B6U6 113 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 MCRIP1C9JLW8 97 aa7.97□□□□□ -1.13
PDLIM5-222ENST00000615540 EFNB2P52799 333 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms