RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 RAB5CP51148 216 aa19.58■□□□□ 0.73
POLR2J3-220ENST00000613744 PAPD4Q6PIY7 484 aaKnown RBP19.58■□□□□ 0.73
POLR2J3-220ENST00000613744 ZNF501Q96CX3 271 aaPredicted RBP19.58■□□□□ 0.73
POLR2J3-220ENST00000613744 CLCC1Q96S66 551 aa19.58■□□□□ 0.73
POLR2J3-220ENST00000613744 CACFD1Q9UGQ2 172 aa19.58■□□□□ 0.73
POLR2J3-220ENST00000613744 FAM96BQ9Y3D0 163 aa19.58■□□□□ 0.73
POLR2J3-220ENST00000613744 TMEM14AQ9Y6G1 99 aa19.58■□□□□ 0.73
POLR2J3-220ENST00000613744 SCN3AQ9NY46 2000 aa19.58■□□□□ 0.72
POLR2J3-220ENST00000613744 A0A087WV48 116 aa19.58■□□□□ 0.72
POLR2J3-220ENST00000613744 NPIPA5A0A0B4J1W7 369 aa19.58■□□□□ 0.72
POLR2J3-220ENST00000613744 NPIPA7E9PJI5 369 aa19.58■□□□□ 0.72
POLR2J3-220ENST00000613744 ST8SIA5O15466 376 aa19.58■□□□□ 0.72
POLR2J3-220ENST00000613744 OR8U8P0C7N1 319 aa19.58■□□□□ 0.72
POLR2J3-220ENST00000613744 NPIPA8P0DM63 369 aa19.58■□□□□ 0.72
POLR2J3-220ENST00000613744 CPMP14384 443 aa19.58■□□□□ 0.72
POLR2J3-220ENST00000613744 CPT2P23786 658 aa19.58■□□□□ 0.72
POLR2J3-220ENST00000613744 GRPRP30550 384 aa19.58■□□□□ 0.72
POLR2J3-220ENST00000613744 DVL1P1P54792 670 aaPredicted RBP19.58■□□□□ 0.72
POLR2J3-220ENST00000613744 TAS2R31P59538 309 aa19.58■□□□□ 0.72
POLR2J3-220ENST00000613744 RAB2AP61019 212 aa19.58■□□□□ 0.72
POLR2J3-220ENST00000613744 RPS4XP62701 263 aaKnown RBP19.58■□□□□ 0.72
POLR2J3-220ENST00000613744 ADAM8P78325 824 aa19.58■□□□□ 0.72
POLR2J3-220ENST00000613744 HGFACQ04756 655 aa19.58■□□□□ 0.72
POLR2J3-220ENST00000613744 SCGB2B2Q4G0G5 96 aa19.58■□□□□ 0.72
POLR2J3-220ENST00000613744 OR2B11Q5JQS5 317 aa19.58■□□□□ 0.72
POLR2J3-220ENST00000613744 ZNF550Q7Z398 422 aa19.58■□□□□ 0.72
POLR2J3-220ENST00000613744 ZNF584Q8IVC4 421 aa19.58■□□□□ 0.72
POLR2J3-220ENST00000613744 PTX4Q96A99 478 aa19.58■□□□□ 0.72
POLR2J3-220ENST00000613744 DCBLD2Q96PD2 775 aa19.58■□□□□ 0.72
POLR2J3-220ENST00000613744 ZNF587Q96SQ5 575 aaPredicted RBP19.58■□□□□ 0.72
POLR2J3-220ENST00000613744 CMKLR1Q99788 373 aa19.58■□□□□ 0.72
POLR2J3-220ENST00000613744 CST11Q9H112 138 aa19.58■□□□□ 0.72
POLR2J3-220ENST00000613744 FBXO34Q9NWN3 711 aa19.58■□□□□ 0.72
POLR2J3-220ENST00000613744 LHX6Q9UPM6 363 aa19.58■□□□□ 0.72
POLR2J3-220ENST00000613744 KLHDC2Q9Y2U9 406 aa19.58■□□□□ 0.72
POLR2J3-220ENST00000613744 LOXL2Q9Y4K0 774 aa19.58■□□□□ 0.72
POLR2J3-220ENST00000613744 A0A0B4J2A0 478 aa19.57■□□□□ 0.72
POLR2J3-220ENST00000613744 FCGR3AP08637 254 aa19.57■□□□□ 0.72
POLR2J3-220ENST00000613744 LEG1Q6P5S2 330 aa19.57■□□□□ 0.72
POLR2J3-220ENST00000613744 ZPLD1Q8TCW7 415 aa19.57■□□□□ 0.72
POLR2J3-220ENST00000613744 C4orf45Q96LM5 186 aa19.57■□□□□ 0.72
POLR2J3-220ENST00000613744 AQP10Q96PS8 301 aa19.57■□□□□ 0.72
POLR2J3-220ENST00000613744 RNF126Q9BV68 326 aa19.57■□□□□ 0.72
POLR2J3-220ENST00000613744 STRADBQ9C0K7 418 aa19.57■□□□□ 0.72
POLR2J3-220ENST00000613744 ADAP2Q9NPF8 381 aa19.57■□□□□ 0.72
POLR2J3-220ENST00000613744 SHPKQ9UHJ6 478 aa19.57■□□□□ 0.72
POLR2J3-220ENST00000613744 A0A1W2PNU3 283 aaPredicted RBP19.56■□□□□ 0.72
POLR2J3-220ENST00000613744 FAM157AC9JC47 383 aa19.56■□□□□ 0.72
POLR2J3-220ENST00000613744 TAAR5O14804 337 aa19.56■□□□□ 0.72
POLR2J3-220ENST00000613744 TIAF1O95411 115 aa19.56■□□□□ 0.72
POLR2J3-220ENST00000613744 TLX1P31314 330 aaPredicted RBP19.56■□□□□ 0.72
POLR2J3-220ENST00000613744 PLA2G5P39877 138 aa19.56■□□□□ 0.72
POLR2J3-220ENST00000613744 RBM39Q14498 530 aaKnown RBP19.56■□□□□ 0.72
POLR2J3-220ENST00000613744 RNASE10Q5GAN6 216 aaKnown RBP19.56■□□□□ 0.72
POLR2J3-220ENST00000613744 CHRNA10Q9GZZ6 450 aa19.56■□□□□ 0.72
POLR2J3-220ENST00000613744 HRH4Q9H3N8 390 aa19.56■□□□□ 0.72
POLR2J3-220ENST00000613744 DNAJB12Q9NXW2 375 aaKnown RBP19.56■□□□□ 0.72
POLR2J3-220ENST00000613744 KNTC1P50748 2209 aa19.56■□□□□ 0.72
POLR2J3-220ENST00000613744 TXNL1O43396 289 aa19.56■□□□□ 0.72
POLR2J3-220ENST00000613744 AQP2P41181 271 aa19.56■□□□□ 0.72
POLR2J3-220ENST00000613744 HTR5AP47898 357 aa19.56■□□□□ 0.72
POLR2J3-220ENST00000613744 ACY1Q03154 408 aa19.56■□□□□ 0.72
POLR2J3-220ENST00000613744 ELAVL1Q15717 326 aaKnown RBP19.56■□□□□ 0.72
POLR2J3-220ENST00000613744 BTNL8Q6UX41 500 aa19.56■□□□□ 0.72
POLR2J3-220ENST00000613744 C1QL4Q86Z23 238 aa19.56■□□□□ 0.72
POLR2J3-220ENST00000613744 RASD2Q96D21 266 aa19.56■□□□□ 0.72
POLR2J3-220ENST00000613744 CPNE2Q96FN4 548 aaPredicted RBP19.56■□□□□ 0.72
POLR2J3-220ENST00000613744 PTCHD1Q96NR3 888 aa19.56■□□□□ 0.72
POLR2J3-220ENST00000613744 SULT4A1Q9BR01 284 aa19.56■□□□□ 0.72
POLR2J3-220ENST00000613744 NAA11Q9BSU3 229 aaPredicted RBP19.56■□□□□ 0.72
POLR2J3-220ENST00000613744 PARP11Q9NR21 331 aa19.56■□□□□ 0.72
POLR2J3-220ENST00000613744 DNAJB11Q9UBS4 358 aa19.56■□□□□ 0.72
POLR2J3-220ENST00000613744 TRBV23-1A0A0A0MS06 115 aa19.55■□□□□ 0.72
POLR2J3-220ENST00000613744 TRMT12Q53H54 448 aaKnown RBP19.55■□□□□ 0.72
POLR2J3-220ENST00000613744 ZNF627Q7L945 461 aa19.55■□□□□ 0.72
POLR2J3-220ENST00000613744 TMEM151BQ8IW70 566 aa19.55■□□□□ 0.72
POLR2J3-220ENST00000613744 METTL27Q8N6F8 245 aaPredicted RBP19.55■□□□□ 0.72
POLR2J3-220ENST00000613744 ZNF511Q8NB15 262 aa19.55■□□□□ 0.72
POLR2J3-220ENST00000613744 TSEN15Q8WW01 171 aaKnown RBP19.55■□□□□ 0.72
POLR2J3-220ENST00000613744 KIRREL1Q96J84 757 aa19.55■□□□□ 0.72
POLR2J3-220ENST00000613744 SERINC2Q96SA4 455 aa19.55■□□□□ 0.72
POLR2J3-220ENST00000613744 LAT2Q9GZY6 243 aa19.55■□□□□ 0.72
POLR2J3-220ENST00000613744 SYT4Q9H2B2 425 aa19.55■□□□□ 0.72
POLR2J3-220ENST00000613744 WDR76Q9H967 626 aa19.55■□□□□ 0.72
POLR2J3-220ENST00000613744 PISDQ9UG56 409 aa19.55■□□□□ 0.72
POLR2J3-220ENST00000613744 LAMP5Q9UJQ1 280 aa19.55■□□□□ 0.72
POLR2J3-220ENST00000613744 IKZF2Q9UKS7 526 aa19.55■□□□□ 0.72
POLR2J3-220ENST00000613744 RARRES3Q9UL19 164 aa19.55■□□□□ 0.72
POLR2J3-220ENST00000613744 A0A1W2PPE3 182 aa19.55■□□□□ 0.72
POLR2J3-220ENST00000613744 C5orf51A6NDU8 294 aa19.55■□□□□ 0.72
POLR2J3-220ENST00000613744 EEF1E1-BLOC1S5C9J1V9 151 aa19.55■□□□□ 0.72
POLR2J3-220ENST00000613744 H3BMH7 237 aa19.55■□□□□ 0.72
POLR2J3-220ENST00000613744 TBPP20226 339 aa19.55■□□□□ 0.72
POLR2J3-220ENST00000613744 RAB5AP20339 215 aa19.55■□□□□ 0.72
POLR2J3-220ENST00000613744 SKP1P63208 163 aa19.55■□□□□ 0.72
POLR2J3-220ENST00000613744 PMPCAQ10713 525 aa19.55■□□□□ 0.72
POLR2J3-220ENST00000613744 PRTGQ2VWP7 1150 aa19.55■□□□□ 0.72
POLR2J3-220ENST00000613744 ZNF585AQ6P3V2 769 aa19.55■□□□□ 0.72
POLR2J3-220ENST00000613744 PRSS54Q6PEW0 395 aa19.55■□□□□ 0.72
POLR2J3-220ENST00000613744 ADGRE4PQ86SQ3 457 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms