RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 RAB22AQ9UL26 194 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 TCFL5Q9UL49 500 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 FXYD6-FXYD2A0A087WZ82 144 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 A0A1W2PNU3 283 aaPredicted RBP13.04□□□□□ -0.32
CDH1-213ENST00000612417 RFPL4AA6NLU0 287 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 RFPL4AL1F8VTS6 287 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 ACSM4P0C7M7 580 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 SRSF4Q08170 494 aaKnown RBP13.04□□□□□ -0.32
CDH1-213ENST00000612417 TCF15Q12870 199 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 MEF2DQ14814 521 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 ZMYND11Q15326 602 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 MOGAT2Q3SYC2 334 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 LY6G6FQ5SQ64 297 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 CLVS2Q5SYC1 327 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 SFRP5Q5T4F7 317 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 RGS7BPQ6MZT1 257 aaPredicted RBP13.04□□□□□ -0.32
CDH1-213ENST00000612417 TMEM65Q6PI78 240 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.04□□□□□ -0.32
CDH1-213ENST00000612417 LILRB2Q8N423 598 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 C12orf45Q8N5I9 185 aaPredicted RBP13.04□□□□□ -0.32
CDH1-213ENST00000612417 IMMP1LQ96LU5 166 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 RASL10BQ96S79 203 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 ARL6Q9H0F7 186 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 FXYD6Q9H0Q3 95 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 METTL7AQ9H8H3 244 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 FOXJ2Q9P0K8 574 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 CYB5R1Q9UHQ9 305 aa13.04□□□□□ -0.32
CDH1-213ENST00000612417 FARSAQ9Y285 508 aaKnown RBP13.04□□□□□ -0.32
CDH1-213ENST00000612417 RPH3AQ9Y2J0 694 aaPredicted RBP13.04□□□□□ -0.32
CDH1-213ENST00000612417 EML6Q6ZMW3 1958 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 IGLV3-32A0A0A0MS00 114 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 LOC101059948A0A1B0GTJ6 334 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 METTL21EPA6NDL7 271 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 MFSD2BA6NFX1 497 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 M0QYG6 137 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 P2RY10O00398 339 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 LMX1BO60663 402 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 CD8AP01732 235 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 TTRP02766 147 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 MSX1P28360 303 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 BDKRB2P30411 391 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 BAMBIQ13145 260 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 EIF3IQ13347 325 aaKnown RBP13.03□□□□□ -0.32
CDH1-213ENST00000612417 ATPAF1Q5TC12 328 aaPredicted RBP13.03□□□□□ -0.32
CDH1-213ENST00000612417 C11orf88Q6PI97 169 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 GSG1LQ6UXU4 331 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 GALNT11Q8NCW6 608 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 ADPRHL1Q8NDY3 354 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 DEFB124Q8NES8 71 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 OR10G3Q8NGC4 313 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 M1APQ8TC57 530 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 RELTQ969Z4 430 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 MRGPRX4Q96LA9 322 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 NUDT16L1Q9BRJ7 211 aaKnown RBP13.03□□□□□ -0.32
CDH1-213ENST00000612417 MRPL13Q9BYD1 178 aaKnown RBP13.03□□□□□ -0.32
CDH1-213ENST00000612417 SERINC1Q9NRX5 453 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 B3GAT1Q9P2W7 334 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 VDAC3Q9Y277 283 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 A0A1B0GTI1 187 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 TMEM235A6NFC5 223 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 RAB27BO00194 218 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 BPNT1O95861 308 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 FCER2P06734 321 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 QRFPP83859 136 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 GK2Q14410 553 aaPredicted RBP13.03□□□□□ -0.32
CDH1-213ENST00000612417 ZNF260Q3ZCT1 412 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 OR10K2Q6IF99 312 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 LPCAT3Q6P1A2 487 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 ZNF529Q6P280 563 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 CORO6Q6QEF8 472 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 ZNF584Q8IVC4 421 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 BPIFB2Q8N4F0 458 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 OR13C8Q8NGS7 320 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 OR6K3Q8NGY3 331 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 C11orf40Q8WZ69 217 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 SLAMF6Q96DU3 332 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 C5orf34Q96MH7 638 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 CNTD2Q9H8S5 307 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 SDHAF2Q9NX18 166 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 ZNF224Q9NZL3 707 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 FBLN5Q9UBX5 448 aa13.03□□□□□ -0.32
CDH1-213ENST00000612417 OR14I1A6ND48 311 aa13.02□□□□□ -0.33
CDH1-213ENST00000612417 MASP2O00187 686 aa13.02□□□□□ -0.33
CDH1-213ENST00000612417 LRP3O75074 770 aa13.02□□□□□ -0.33
CDH1-213ENST00000612417 SCGNO76038 276 aa13.02□□□□□ -0.33
CDH1-213ENST00000612417 POU3F2P20265 443 aaPredicted RBP13.02□□□□□ -0.33
CDH1-213ENST00000612417 ZP3P21754 424 aa13.02□□□□□ -0.33
CDH1-213ENST00000612417 BIDP55957 195 aa13.02□□□□□ -0.33
CDH1-213ENST00000612417 PLPPR5Q32ZL2 321 aa13.02□□□□□ -0.33
CDH1-213ENST00000612417 THEM4Q5T1C6 240 aa13.02□□□□□ -0.33
CDH1-213ENST00000612417 PIP4P1Q86T03 277 aa13.02□□□□□ -0.33
CDH1-213ENST00000612417 SLC22A24Q8N4F4 322 aa13.02□□□□□ -0.33
CDH1-213ENST00000612417 PAQR4Q8N4S7 273 aaPredicted RBP13.02□□□□□ -0.33
CDH1-213ENST00000612417 PRSS33Q8NF86 280 aa13.02□□□□□ -0.33
CDH1-213ENST00000612417 OR10H5Q8NGA6 315 aa13.02□□□□□ -0.33
CDH1-213ENST00000612417 OR10Z1Q8NGY1 313 aa13.02□□□□□ -0.33
CDH1-213ENST00000612417 SPACA9Q96E40 222 aaPredicted RBP13.02□□□□□ -0.33
CDH1-213ENST00000612417 PRRT1Q99946 306 aa13.02□□□□□ -0.33
CDH1-213ENST00000612417 CENPMQ9NSP4 180 aa13.02□□□□□ -0.33
CDH1-213ENST00000612417 PPP4R1LQ9P1A2 415 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms