RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 LANCL2Q9NS86 450 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 SHPKQ9UHJ6 478 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 IGHV3-64DA0A0J9YX35 117 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 A0A1B0GUH1 482 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 D6RAR5 112 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 TPT1P13693 172 aaKnown RBP11.76□□□□□ -0.53
TCF3-220ENST00000611869 FOXK1P85037 733 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 ECH1Q13011 328 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 HAGHLQ6PII5 290 aaPredicted RBP11.76□□□□□ -0.53
TCF3-220ENST00000611869 C17orf107Q6ZR85 190 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 CDC20BQ86Y33 519 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 ZSCAN1Q8NBB4 408 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 MCHR2Q969V1 340 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 PLA2G3Q9NZ20 509 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 SH3BGRL2Q9UJC5 107 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 COLQQ9Y215 455 aaPredicted RBP11.76□□□□□ -0.53
TCF3-220ENST00000611869 TIMM10BQ9Y5J6 103 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 TRAV8-7A0A075B6U6 113 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 LANCL1O43813 399 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 SLC34A2O95436 690 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 RECKO95980 971 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 BGLAPP02818 100 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 GIPP09681 153 aaPredicted RBP11.76□□□□□ -0.53
TCF3-220ENST00000611869 ZNF806P0C7X5 589 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 EDN3P14138 238 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 RPS4Y1P22090 263 aaKnown RBP11.76□□□□□ -0.53
TCF3-220ENST00000611869 GCH1P30793 250 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 RBP2P50120 134 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 RRADP55042 308 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 B3GNTL1Q67FW5 361 aaPredicted RBP11.76□□□□□ -0.53
TCF3-220ENST00000611869 CRLF2Q9HC73 371 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 ST6GALNAC2Q9UJ37 374 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 KLHDC2Q9Y2U9 406 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 ZNF780AO75290 641 aaPredicted RBP11.75□□□□□ -0.53
TCF3-220ENST00000611869 ISXQ2M1V0 245 aa11.75□□□□□ -0.53
TCF3-220ENST00000611869 TMEM178AQ8NBL3 297 aa11.75□□□□□ -0.53
TCF3-220ENST00000611869 A0A1W2PR77 199 aa11.75□□□□□ -0.53
TCF3-220ENST00000611869 MCRIP1C9JLW8 97 aa11.75□□□□□ -0.53
TCF3-220ENST00000611869 CAMLGP49069 296 aa11.75□□□□□ -0.53
TCF3-220ENST00000611869 ST3GAL2Q16842 350 aa11.75□□□□□ -0.53
TCF3-220ENST00000611869 PHLDA2Q53GA4 152 aa11.75□□□□□ -0.53
TCF3-220ENST00000611869 OR52W1Q6IF63 320 aa11.75□□□□□ -0.53
TCF3-220ENST00000611869 OGFOD3Q6PK18 319 aa11.75□□□□□ -0.53
TCF3-220ENST00000611869 TCTE3Q8IZS6 198 aa11.75□□□□□ -0.53
TCF3-220ENST00000611869 OR2AK2Q8NG84 335 aa11.75□□□□□ -0.53
TCF3-220ENST00000611869 ST6GAL2Q96JF0 529 aa11.75□□□□□ -0.53
TCF3-220ENST00000611869 EDEM2Q9BV94 578 aa11.75□□□□□ -0.53
TCF3-220ENST00000611869 TAS2R5Q9NYW4 299 aa11.75□□□□□ -0.53
TCF3-220ENST00000611869 VSTM5A8MXK1 200 aa11.75□□□□□ -0.53
TCF3-220ENST00000611869 ANGPTL7O43827 346 aa11.75□□□□□ -0.53
TCF3-220ENST00000611869 FADS1O60427 444 aa11.75□□□□□ -0.53
TCF3-220ENST00000611869 GMDSO60547 372 aa11.75□□□□□ -0.53
TCF3-220ENST00000611869 SLC6A1P30531 599 aa11.75□□□□□ -0.53
TCF3-220ENST00000611869 BAMBIQ13145 260 aa11.75□□□□□ -0.53
TCF3-220ENST00000611869 TRA2AQ13595 282 aaKnown RBP eCLIP11.75□□□□□ -0.53
TCF3-220ENST00000611869 TEX19Q8NA77 164 aa11.75□□□□□ -0.53
TCF3-220ENST00000611869 SCGB1C1Q8TD33 95 aa11.75□□□□□ -0.53
TCF3-220ENST00000611869 TCEAL3Q969E4 200 aa11.75□□□□□ -0.53
TCF3-220ENST00000611869 C1QTNF6Q9BXI9 259 aa11.75□□□□□ -0.53
TCF3-220ENST00000611869 A0A0D9SG52 128 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 CTAG2O75638 210 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 OR4E1P0C645 316 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 PRSS12P56730 875 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 ACER2Q5QJU3 275 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 ELFN2Q5R3F8 820 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 RFPL4BQ6ZWI9 263 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 OR52H1Q8NGJ2 320 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 OR51A2Q8NGJ7 313 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 OIT3Q8WWZ8 545 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 TMEM272A0A1B0GTI8 110 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 LUMP51884 338 aaPredicted RBP11.74□□□□□ -0.53
TCF3-220ENST00000611869 OR2V1Q8NHB1 315 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 MARCH1Q8TCQ1 289 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 PPP1R3EQ9H7J1 279 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 OR2M5A3KFT3 312 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 ANKRD34BA5PLL1 514 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 LIPT2A6NK58 231 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 TGFBR3LH3BV60 316 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 ITGB2P05107 769 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 IAH1Q2TAA2 248 aaPredicted RBP11.74□□□□□ -0.53
TCF3-220ENST00000611869 STX12Q86Y82 276 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 DUSP18Q8NEJ0 188 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 OR10R2Q8NGX6 335 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 OR51F2Q8NH61 342 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 ARL11Q969Q4 196 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 SPIN2AQ99865 258 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 SPIN2BQ9BPZ2 258 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 ZNF416Q9BWM5 594 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 GSX2Q9BZM3 304 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 SF3B6Q9Y3B4 125 aaKnown RBP11.74□□□□□ -0.53
TCF3-220ENST00000611869 R4GN57 208 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 DOCK8Q8NF50 2099 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 NOTCH4Q99466 2003 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 F8W036 122 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 CRYZL1O95825 349 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 IFNA5P01569 189 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 MGMTP16455 207 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 BLOC1S1P78537 153 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 INPP5JQ15735 1006 aaPredicted RBP11.74□□□□□ -0.53
TCF3-220ENST00000611869 ANKRD16Q6P6B7 361 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms