RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 C12orf10Q9HB07 376 aa6.51□□□□□ -1.37
CSDE1-218ENST00000610726 ZNF71Q9NQZ8 489 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-218ENST00000610726 PCDHB10Q9UN67 800 aa6.51□□□□□ -1.37
CSDE1-218ENST00000610726 HEATR5BQ9P2D3 2071 aa6.51□□□□□ -1.37
CSDE1-218ENST00000610726 LIPT2A6NK58 231 aa6.51□□□□□ -1.37
CSDE1-218ENST00000610726 TBX6O95947 436 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-218ENST00000610726 IFNA5P01569 189 aa6.51□□□□□ -1.37
CSDE1-218ENST00000610726 DCAF10Q5QP82 559 aa6.51□□□□□ -1.37
CSDE1-218ENST00000610726 HAGHLQ6PII5 290 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-218ENST00000610726 SLC25A26Q70HW3 274 aa6.51□□□□□ -1.37
CSDE1-218ENST00000610726 VRK1Q99986 396 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-218ENST00000610726 NELFAQ9H3P2 528 aa6.51□□□□□ -1.37
CSDE1-218ENST00000610726 AKIRIN1Q9H9L7 192 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-218ENST00000610726 PTTG3PQ9NZH4 202 aa6.51□□□□□ -1.37
CSDE1-218ENST00000610726 EXOGQ9Y2C4 368 aaKnown RBP6.51□□□□□ -1.37
CSDE1-218ENST00000610726 C17orf51A8MQB3 221 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 BPNT1O95861 308 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 CRYAAP02489 173 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 OR8U9P0C7N5 309 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 ZNF32P17041 273 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 ADH6P28332 368 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 MAGEA5P43359 124 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 BCL2A1Q16548 175 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 PAN3Q58A45 887 aaKnown RBP6.5□□□□□ -1.37
CSDE1-218ENST00000610726 ZNF774Q6NX45 483 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 ZNF546Q86UE3 836 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 DEFB108BQ8NET1 73 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 ZFAND1Q8TCF1 268 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 FAM210AQ96ND0 272 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 SPIN2AQ99865 258 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 SPIN2BQ9BPZ2 258 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 MED18Q9BUE0 208 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 SRRQ9GZT4 340 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 C20orf85Q9H1P6 137 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 WDR54Q9H977 334 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 BCO1Q9HAY6 547 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 COQ3Q9NZJ6 369 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 SIP14410 1827 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 MN1Q10571 1320 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-218ENST00000610726 OR5H15A6NDH6 313 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 OR6C6A6NF89 314 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 ZNF891A8MT65 544 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-218ENST00000610726 H3BMH7 237 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 EPPINO95925 133 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 LPLP06858 475 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 RPA2P15927 270 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 GNB3P16520 340 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 PRKACAP17612 351 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 DCTDP32321 178 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 ARR3P36575 388 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 SOX8P57073 446 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 RAC3P60763 192 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 ZNF85Q03923 595 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 ZMYND11Q15326 602 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 KCNJ8Q15842 424 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 PHLDA2Q53GA4 152 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 STPG1Q5TH74 334 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 GLCCI1Q86VQ1 547 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 FJX1Q86VR8 437 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 RNF128Q8TEB7 428 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 GLYATL2Q8WU03 294 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 FYTTD1Q96QD9 318 aaKnown RBP6.5□□□□□ -1.37
CSDE1-218ENST00000610726 KCNJ15Q99712 375 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 ANKRD36A6QL64 1941 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 TRAV1-2A0A0B4J238 106 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 HSPB2A8KAH6 182 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 M0R036 132 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 GDF9O60383 454 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 LALBAP00709 142 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 CD3DP04234 171 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 CCL2P13500 99 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 PI3P19957 117 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 CNR1P21554 472 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 SDHBP21912 280 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 HAAOP46952 286 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 OR8G1Q15617 311 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 HSPB2Q16082 182 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 CLPPQ16740 277 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-218ENST00000610726 JMJD6Q6NYC1 403 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-218ENST00000610726 MAMSTRQ6ZN01 415 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 RHOUQ7L0Q8 258 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 STX12Q86Y82 276 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 WFDC8Q8IUA0 241 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 GTPBP8Q8N3Z3 284 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-218ENST00000610726 OR1F12Q8NHA8 337 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 ZPLD1Q8TCW7 415 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 MRM2Q9UI43 246 aaKnown RBP6.5□□□□□ -1.37
CSDE1-218ENST00000610726 FLVCR2Q9UPI3 526 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 MRPS18BQ9Y676 258 aaKnown RBP6.5□□□□□ -1.37
CSDE1-218ENST00000610726 CACNA1DQ01668 2161 aa6.5□□□□□ -1.37
CSDE1-218ENST00000610726 LNP1A1A4G5 178 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 PMS2P1A4D2B8 440 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 CD300LBA8K4G0 201 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 C21orf140B9A014 251 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 LINC01387J3KSC0 135 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 TNFSF12O43508 249 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 IGLV3-19P01714 112 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 DUSP1P28562 367 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 SELENOPP49908 381 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 RAP2BP61225 183 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms