RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 NPTNQ9Y639 398 aa11.34□□□□□ -0.59
SENP3-209ENST00000610454 LRRC30A6NM36 301 aa11.33□□□□□ -0.6
SENP3-209ENST00000610454 EBAG9O00559 213 aa11.33□□□□□ -0.6
SENP3-209ENST00000610454 XRCC2O43543 280 aa11.33□□□□□ -0.6
SENP3-209ENST00000610454 LYNP07948 512 aa11.33□□□□□ -0.6
SENP3-209ENST00000610454 SLC2A1P11166 492 aa11.33□□□□□ -0.6
SENP3-209ENST00000610454 PSKH1P11801 424 aa11.33□□□□□ -0.6
SENP3-209ENST00000610454 OTX1P32242 354 aaPredicted RBP11.33□□□□□ -0.6
SENP3-209ENST00000610454 NAA10P41227 235 aaPredicted RBP11.33□□□□□ -0.6
SENP3-209ENST00000610454 PRSS12P56730 875 aa11.33□□□□□ -0.6
SENP3-209ENST00000610454 APOFQ13790 326 aa11.33□□□□□ -0.6
SENP3-209ENST00000610454 PTGES3Q15185 160 aaKnown RBP11.33□□□□□ -0.6
SENP3-209ENST00000610454 OR8G1Q15617 311 aa11.33□□□□□ -0.6
SENP3-209ENST00000610454 TIGD6Q17RP2 521 aa11.33□□□□□ -0.6
SENP3-209ENST00000610454 SNAI3Q3KNW1 292 aa11.33□□□□□ -0.6
SENP3-209ENST00000610454 LCN1P1Q5VSP4 162 aa11.33□□□□□ -0.6
SENP3-209ENST00000610454 IL17RELQ6ZVW7 336 aa11.33□□□□□ -0.6
SENP3-209ENST00000610454 RHOUQ7L0Q8 258 aa11.33□□□□□ -0.6
SENP3-209ENST00000610454 ZNF771Q7L3S4 317 aaPredicted RBP11.33□□□□□ -0.6
SENP3-209ENST00000610454 PRIMA1Q86XR5 153 aa11.33□□□□□ -0.6
SENP3-209ENST00000610454 KLHL36Q8N4N3 616 aa11.33□□□□□ -0.6
SENP3-209ENST00000610454 SPICQ8N5J4 248 aa11.33□□□□□ -0.6
SENP3-209ENST00000610454 ZNF454Q8N9F8 522 aa11.33□□□□□ -0.6
SENP3-209ENST00000610454 OR2AE1Q8NHA4 323 aa11.33□□□□□ -0.6
SENP3-209ENST00000610454 LRTOMTQ8WZ04 291 aa11.33□□□□□ -0.6
SENP3-209ENST00000610454 TMEM186Q96B77 213 aa11.33□□□□□ -0.6
SENP3-209ENST00000610454 DUS3LQ96G46 650 aaKnown RBP11.33□□□□□ -0.6
SENP3-209ENST00000610454 C1orf159Q96HA4 380 aa11.33□□□□□ -0.6
SENP3-209ENST00000610454 ABHD6Q9BV23 337 aa11.33□□□□□ -0.6
SENP3-209ENST00000610454 SLC22A4Q9H015 551 aa11.33□□□□□ -0.6
SENP3-209ENST00000610454 MARCH7Q9H992 704 aa11.33□□□□□ -0.6
SENP3-209ENST00000610454 DNAJC27Q9NZQ0 273 aa11.33□□□□□ -0.6
SENP3-209ENST00000610454 H2AFY2Q9P0M6 372 aaPredicted RBP11.33□□□□□ -0.6
SENP3-209ENST00000610454 CD300LBA8K4G0 201 aa11.32□□□□□ -0.6
SENP3-209ENST00000610454 FAM157AC9JC47 383 aa11.32□□□□□ -0.6
SENP3-209ENST00000610454 SELENOFO60613 162 aa11.32□□□□□ -0.6
SENP3-209ENST00000610454 SBK2P0C263 348 aa11.32□□□□□ -0.6
SENP3-209ENST00000610454 IRF2P14316 349 aa11.32□□□□□ -0.6
SENP3-209ENST00000610454 CFL1P23528 166 aaKnown RBP11.32□□□□□ -0.6
SENP3-209ENST00000610454 SRP14P37108 136 aaKnown RBP11.32□□□□□ -0.6
SENP3-209ENST00000610454 LMO4P61968 165 aa11.32□□□□□ -0.6
SENP3-209ENST00000610454 ZNF92Q03936 586 aa11.32□□□□□ -0.6
SENP3-209ENST00000610454 SPRNQ5BIV9 151 aa11.32□□□□□ -0.6
SENP3-209ENST00000610454 GLYATL3Q5SZD4 288 aa11.32□□□□□ -0.6
SENP3-209ENST00000610454 ASRGL1Q7L266 308 aa11.32□□□□□ -0.6
SENP3-209ENST00000610454 TIGD4Q8IY51 512 aa11.32□□□□□ -0.6
SENP3-209ENST00000610454 C10orf67Q8IYJ2 551 aa11.32□□□□□ -0.6
SENP3-209ENST00000610454 C1orf87Q8N0U7 546 aa11.32□□□□□ -0.6
SENP3-209ENST00000610454 OTOSQ8NHW6 89 aa11.32□□□□□ -0.6
SENP3-209ENST00000610454 RNF133Q8WVZ7 376 aa11.32□□□□□ -0.6
SENP3-209ENST00000610454 CENPNQ96H22 339 aaPredicted RBP11.32□□□□□ -0.6
SENP3-209ENST00000610454 MEGF10Q96KG7 1140 aa11.32□□□□□ -0.6
SENP3-209ENST00000610454 ADAT1Q9BUB4 502 aaKnown RBP11.32□□□□□ -0.6
SENP3-209ENST00000610454 GABARAPL1Q9H0R8 117 aa11.32□□□□□ -0.6
SENP3-209ENST00000610454 SEMA6AQ9H2E6 1030 aa11.32□□□□□ -0.6
SENP3-209ENST00000610454 HIF1ANQ9NWT6 349 aa11.32□□□□□ -0.6
SENP3-209ENST00000610454 LAMP5Q9UJQ1 280 aa11.32□□□□□ -0.6
SENP3-209ENST00000610454 TRAV20A0A0B4J274 112 aa11.31□□□□□ -0.6
SENP3-209ENST00000610454 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.31□□□□□ -0.6
SENP3-209ENST00000610454 F5H5P2 479 aa11.31□□□□□ -0.6
SENP3-209ENST00000610454 H0YL77 283 aa11.31□□□□□ -0.6
SENP3-209ENST00000610454 MLNRO43193 412 aa11.31□□□□□ -0.6
SENP3-209ENST00000610454 IGHV2-5P01817 119 aa11.31□□□□□ -0.6
SENP3-209ENST00000610454 HLA-DPB1P04440 258 aa11.31□□□□□ -0.6
SENP3-209ENST00000610454 BTG1P62324 171 aa11.31□□□□□ -0.6
SENP3-209ENST00000610454 MZT1Q08AG7 82 aa11.31□□□□□ -0.6
SENP3-209ENST00000610454 GFOD2Q3B7J2 385 aa11.31□□□□□ -0.6
SENP3-209ENST00000610454 ZFP1Q6P2D0 407 aa11.31□□□□□ -0.6
SENP3-209ENST00000610454 FAM57BQ71RH2 274 aa11.31□□□□□ -0.6
SENP3-209ENST00000610454 KRT77Q7Z794 578 aa11.31□□□□□ -0.6
SENP3-209ENST00000610454 MOGAT3Q86VF5 341 aa11.31□□□□□ -0.6
SENP3-209ENST00000610454 MUC20Q8N307 709 aaPredicted RBP11.31□□□□□ -0.6
SENP3-209ENST00000610454 BBS1Q8NFJ9 593 aa11.31□□□□□ -0.6
SENP3-209ENST00000610454 OR52H1Q8NGJ2 320 aa11.31□□□□□ -0.6
SENP3-209ENST00000610454 OR11L1Q8NGX0 322 aa11.31□□□□□ -0.6
SENP3-209ENST00000610454 PYDC1Q8WXC3 89 aa11.31□□□□□ -0.6
SENP3-209ENST00000610454 PGAM5Q96HS1 289 aa11.31□□□□□ -0.6
SENP3-209ENST00000610454 REPIN1Q9BWE0 567 aaKnown RBP11.31□□□□□ -0.6
SENP3-209ENST00000610454 OR10A2Q9H208 303 aa11.31□□□□□ -0.6
SENP3-209ENST00000610454 GCM1Q9NP62 436 aa11.31□□□□□ -0.6
SENP3-209ENST00000610454 BRD7Q9NPI1 651 aa11.31□□□□□ -0.6
SENP3-209ENST00000610454 OAZ3Q9UMX2 235 aa11.31□□□□□ -0.6
SENP3-209ENST00000610454 ORC6Q9Y5N6 252 aa11.31□□□□□ -0.6
SENP3-209ENST00000610454 IGHV3-64DA0A0J9YX35 117 aa11.3□□□□□ -0.6
SENP3-209ENST00000610454 ANKRD30BLA7E2S9 258 aa11.3□□□□□ -0.6
SENP3-209ENST00000610454 KIAA1324LA8MWY0 1029 aaPredicted RBP11.3□□□□□ -0.6
SENP3-209ENST00000610454 GMDSO60547 372 aa11.3□□□□□ -0.6
SENP3-209ENST00000610454 MITFO75030 526 aaPredicted RBP11.3□□□□□ -0.6
SENP3-209ENST00000610454 IGHV2-70P01814 119 aa11.3□□□□□ -0.6
SENP3-209ENST00000610454 SLC2A5P22732 501 aa11.3□□□□□ -0.6
SENP3-209ENST00000610454 CA6P23280 308 aa11.3□□□□□ -0.6
SENP3-209ENST00000610454 DDOSTP39656 456 aa11.3□□□□□ -0.6
SENP3-209ENST00000610454 MDH2P40926 338 aaKnown RBP11.3□□□□□ -0.6
SENP3-209ENST00000610454 OPRL1P41146 370 aa11.3□□□□□ -0.6
SENP3-209ENST00000610454 MMP16P51512 607 aa11.3□□□□□ -0.6
SENP3-209ENST00000610454 ZNF121P58317 390 aaPredicted RBP11.3□□□□□ -0.6
SENP3-209ENST00000610454 KPNB1Q14974 876 aaKnown RBP11.3□□□□□ -0.6
SENP3-209ENST00000610454 SNCBQ16143 134 aa11.3□□□□□ -0.6
SENP3-209ENST00000610454 TMEM155Q4W5P6 130 aa11.3□□□□□ -0.6
SENP3-209ENST00000610454 KDM4DQ6B0I6 523 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms