RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 NDUFS7O75251 213 aa12.18□□□□□ -0.46
CTSA-219ENST00000607841 WBP4O75554 376 aaKnown RBP12.18□□□□□ -0.46
CTSA-219ENST00000607841 SULT1C4O75897 302 aa12.18□□□□□ -0.46
CTSA-219ENST00000607841 HSPA13P48723 471 aa12.18□□□□□ -0.46
CTSA-219ENST00000607841 MMP15P51511 669 aa12.18□□□□□ -0.46
CTSA-219ENST00000607841 MMP16P51512 607 aa12.18□□□□□ -0.46
CTSA-219ENST00000607841 AQP4P55087 323 aa12.18□□□□□ -0.46
CTSA-219ENST00000607841 GLYATL3Q5SZD4 288 aa12.18□□□□□ -0.46
CTSA-219ENST00000607841 OR2T2Q6IF00 324 aa12.18□□□□□ -0.46
CTSA-219ENST00000607841 SPNS3Q6ZMD2 512 aa12.18□□□□□ -0.46
CTSA-219ENST00000607841 PLEKHG7Q6ZR37 379 aa12.18□□□□□ -0.46
CTSA-219ENST00000607841 PRSS45Q7RTY3 260 aa12.18□□□□□ -0.46
CTSA-219ENST00000607841 ZCCHC24Q8N2G6 241 aaKnown RBP12.18□□□□□ -0.46
CTSA-219ENST00000607841 SPRYD4Q8WW59 207 aaPredicted RBP12.18□□□□□ -0.46
CTSA-219ENST00000607841 LGALS12Q96DT0 336 aa12.18□□□□□ -0.46
CTSA-219ENST00000607841 REPIN1Q9BWE0 567 aaKnown RBP12.18□□□□□ -0.46
CTSA-219ENST00000607841 TTTY10Q9BZA0 68 aa12.18□□□□□ -0.46
CTSA-219ENST00000607841 TPK1Q9H3S4 243 aa12.18□□□□□ -0.46
CTSA-219ENST00000607841 AMBNQ9NP70 447 aa12.18□□□□□ -0.46
CTSA-219ENST00000607841 BRD7Q9NPI1 651 aa12.18□□□□□ -0.46
CTSA-219ENST00000607841 INPP5EQ9NRR6 644 aa12.18□□□□□ -0.46
CTSA-219ENST00000607841 MRPS18AQ9NVS2 196 aaKnown RBP12.18□□□□□ -0.46
CTSA-219ENST00000607841 NKIRAS2Q9NYR9 191 aa12.18□□□□□ -0.46
CTSA-219ENST00000607841 ZNF391Q9UJN7 358 aa12.18□□□□□ -0.46
CTSA-219ENST00000607841 AKAP6Q13023 2319 aa12.17□□□□□ -0.46
CTSA-219ENST00000607841 GGT3PA6NGU5 568 aa12.17□□□□□ -0.46
CTSA-219ENST00000607841 METTL15A6NJ78 407 aa12.17□□□□□ -0.46
CTSA-219ENST00000607841 IQCF6A8MYZ5 107 aa12.17□□□□□ -0.46
CTSA-219ENST00000607841 J3QRE1 110 aa12.17□□□□□ -0.46
CTSA-219ENST00000607841 SPRY3O43610 288 aa12.17□□□□□ -0.46
CTSA-219ENST00000607841 TACSTD2P09758 323 aa12.17□□□□□ -0.46
CTSA-219ENST00000607841 CSF3P09919 207 aa12.17□□□□□ -0.46
CTSA-219ENST00000607841 TNFSF4P23510 183 aa12.17□□□□□ -0.46
CTSA-219ENST00000607841 DDOSTP39656 456 aa12.17□□□□□ -0.46
CTSA-219ENST00000607841 ZNF92Q03936 586 aa12.17□□□□□ -0.46
CTSA-219ENST00000607841 CDK5R2Q13319 367 aa12.17□□□□□ -0.46
CTSA-219ENST00000607841 CLEC12BQ2HXU8 276 aa12.17□□□□□ -0.46
CTSA-219ENST00000607841 FAM209AQ5JX71 171 aa12.17□□□□□ -0.46
CTSA-219ENST00000607841 CLEC2AQ6UVW9 174 aa12.17□□□□□ -0.46
CTSA-219ENST00000607841 FAM220AQ7Z4H9 259 aa12.17□□□□□ -0.46
CTSA-219ENST00000607841 KCTD20Q7Z5Y7 419 aa12.17□□□□□ -0.46
CTSA-219ENST00000607841 THAP5Q7Z6K1 395 aa12.17□□□□□ -0.46
CTSA-219ENST00000607841 RFLNBQ8N5W9 214 aa12.17□□□□□ -0.46
CTSA-219ENST00000607841 YIPF7Q8N8F6 280 aa12.17□□□□□ -0.46
CTSA-219ENST00000607841 OR8G5Q8NG78 346 aa12.17□□□□□ -0.46
CTSA-219ENST00000607841 OR13G1Q8NGZ3 307 aa12.17□□□□□ -0.46
CTSA-219ENST00000607841 CNIH3Q8TBE1 160 aa12.17□□□□□ -0.46
CTSA-219ENST00000607841 SPSB4Q96A44 273 aa12.17□□□□□ -0.46
CTSA-219ENST00000607841 SGK3Q96BR1 496 aa12.17□□□□□ -0.46
CTSA-219ENST00000607841 EGLN1Q9GZT9 426 aa12.17□□□□□ -0.46
CTSA-219ENST00000607841 MOB1AQ9H8S9 216 aa12.17□□□□□ -0.46
CTSA-219ENST00000607841 DECR2Q9NUI1 292 aa12.17□□□□□ -0.46
CTSA-219ENST00000607841 MRM2Q9UI43 246 aaKnown RBP12.17□□□□□ -0.46
CTSA-219ENST00000607841 ANKRD17O75179 2603 aaKnown RBP12.17□□□□□ -0.46
CTSA-219ENST00000607841 PLCE1Q9P212 2302 aa12.16□□□□□ -0.46
CTSA-219ENST00000607841 AKAP9Q99996 3911 aa12.16□□□□□ -0.46
CTSA-219ENST00000607841 PRR32B1ATL7 298 aa12.16□□□□□ -0.46
CTSA-219ENST00000607841 TPD52L2O43399 206 aaKnown RBP12.16□□□□□ -0.46
CTSA-219ENST00000607841 ADH4P08319 380 aa12.16□□□□□ -0.46
CTSA-219ENST00000607841 GNAO1P09471 354 aa12.16□□□□□ -0.46
CTSA-219ENST00000607841 DAOP14920 347 aa12.16□□□□□ -0.46
CTSA-219ENST00000607841 VHLP40337 213 aa12.16□□□□□ -0.46
CTSA-219ENST00000607841 ACTA2P62736 377 aa12.16□□□□□ -0.46
CTSA-219ENST00000607841 ACTG2P63267 376 aa12.16□□□□□ -0.46
CTSA-219ENST00000607841 ZNF85Q03923 595 aa12.16□□□□□ -0.46
CTSA-219ENST00000607841 SNCBQ16143 134 aa12.16□□□□□ -0.46
CTSA-219ENST00000607841 SMN1Q16637 294 aaKnown RBP12.16□□□□□ -0.46
CTSA-219ENST00000607841 TMEM255AQ5JRV8 349 aa12.16□□□□□ -0.46
CTSA-219ENST00000607841 C6orf52Q5T4I8 152 aa12.16□□□□□ -0.46
CTSA-219ENST00000607841 IZUMO2Q6UXV1 221 aa12.16□□□□□ -0.46
CTSA-219ENST00000607841 SSX6Q7RTT6 188 aa12.16□□□□□ -0.46
CTSA-219ENST00000607841 EGFL6Q8IUX8 553 aa12.16□□□□□ -0.46
CTSA-219ENST00000607841 OR5AS1Q8N127 324 aa12.16□□□□□ -0.46
CTSA-219ENST00000607841 OR2AE1Q8NHA4 323 aa12.16□□□□□ -0.46
CTSA-219ENST00000607841 ITFG2Q969R8 447 aa12.16□□□□□ -0.46
CTSA-219ENST00000607841 REEP6Q96HR9 211 aa12.16□□□□□ -0.46
CTSA-219ENST00000607841 RHNO1Q9BSD3 238 aa12.16□□□□□ -0.46
CTSA-219ENST00000607841 PBOV1Q9GZY1 135 aa12.16□□□□□ -0.46
CTSA-219ENST00000607841 SLC22A4Q9H015 551 aa12.16□□□□□ -0.46
CTSA-219ENST00000607841 MSL2Q9HCI7 577 aa12.16□□□□□ -0.46
CTSA-219ENST00000607841 TMEM100Q9NV29 134 aa12.16□□□□□ -0.46
CTSA-219ENST00000607841 FAM206AQ9NX38 181 aa12.16□□□□□ -0.46
CTSA-219ENST00000607841 NOP16Q9Y3C1 178 aaKnown RBP12.16□□□□□ -0.46
CTSA-219ENST00000607841 SNX5Q9Y5X3 404 aa12.16□□□□□ -0.46
CTSA-219ENST00000607841 R4GMQ9 66 aa12.16□□□□□ -0.46
CTSA-219ENST00000607841 ZSCAN5BA6NJL1 495 aa12.15□□□□□ -0.46
CTSA-219ENST00000607841 CD300LBA8K4G0 201 aa12.15□□□□□ -0.46
CTSA-219ENST00000607841 LOC110117498-PIK3R3F6TDL0 507 aa12.15□□□□□ -0.46
CTSA-219ENST00000607841 MAGEB4O15481 346 aaPredicted RBP12.15□□□□□ -0.46
CTSA-219ENST00000607841 IGHV1-46P01743 117 aa12.15□□□□□ -0.46
CTSA-219ENST00000607841 IGHA1P01876 353 aa12.15□□□□□ -0.46
CTSA-219ENST00000607841 DCKP27707 260 aa12.15□□□□□ -0.46
CTSA-219ENST00000607841 MAGEB1P43366 347 aa12.15□□□□□ -0.46
CTSA-219ENST00000607841 PDLIM4P50479 330 aa12.15□□□□□ -0.46
CTSA-219ENST00000607841 CSNK2BP67870 215 aa12.15□□□□□ -0.46
CTSA-219ENST00000607841 MRPS11P82912 194 aaKnown RBP12.15□□□□□ -0.46
CTSA-219ENST00000607841 TSTQ16762 297 aaKnown RBP12.15□□□□□ -0.46
CTSA-219ENST00000607841 GFOD2Q3B7J2 385 aa12.15□□□□□ -0.46
CTSA-219ENST00000607841 ZNF684Q5T5D7 378 aa12.15□□□□□ -0.46
CTSA-219ENST00000607841 LIPNQ5VXI9 398 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms