RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 SHOX2O60902 331 aaPredicted RBP12.55□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 KHDRBS3O75525 346 aaKnown RBP12.55□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 GRPP07492 148 aa12.55□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 CTLA4P16410 223 aa12.55□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 FAHP16930 419 aa12.55□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 ZNF26P17031 533 aaPredicted RBP12.55□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 MRPL19P49406 292 aaKnown RBP12.55□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 SLC35A2P78381 396 aa12.55□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 LRRC75BQ2VPJ9 315 aa12.55□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 FGFRL1Q8N441 504 aa12.55□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 GCSAMQ8N6F7 178 aa12.55□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 WFDC9Q8NEX5 89 aa12.55□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 ACOT11Q8WXI4 607 aaPredicted RBP12.55□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 H1FXQ92522 213 aaKnown RBP12.55□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 ZNF570Q96NI8 536 aa12.55□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 CCL13Q99616 98 aa12.55□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 RPS6KA6Q9UK32 745 aa12.55□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 BAG5Q9UL15 447 aa12.55□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 DNAH3Q8TD57 4116 aa12.54□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 WI2-2373I1.2A0A1W2PRP0 233 aa12.54□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 F5H5K5 113 aa12.54□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 SLC16A7O60669 478 aa12.54□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 PTBP3O95758 552 aaKnown RBP12.54□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 LCATP04180 440 aa12.54□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 PF4V1P10720 104 aa12.54□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 TNFRSF1BP20333 461 aa12.54□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 IFNA8P32881 189 aa12.54□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 CENPAP49450 140 aa12.54□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 MTPNP58546 118 aa12.54□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 COL10A1Q03692 680 aa12.54□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 MZT1Q08AG7 82 aa12.54□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 BLMHQ13867 455 aa12.54□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 KLHL22Q53GT1 634 aa12.54□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 MESTQ5EB52 335 aa12.54□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 TEX36Q5VZQ5 186 aa12.54□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 DLEU7Q6UYE1 221 aa12.54□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 LIAT1Q6ZQX7 453 aa12.54□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 ZNF826PQ6ZT77 177 aa12.54□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.54□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 Q8N7P7 452 aa12.54□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 RORBQ92753 470 aa12.54□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 DCTN5Q9BTE1 182 aa12.54□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 ADAM18Q9Y3Q7 739 aa12.54□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.53□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 EFCAB9A8MZ26 197 aa12.53□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 PF4P02776 101 aa12.53□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 MUC1P15941 1255 aaPredicted RBP12.53□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 ST3GAL3Q11203 375 aa12.53□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 IKZF1Q13422 519 aa12.53□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 DCTN2Q13561 401 aaKnown RBP12.53□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 AGKQ53H12 422 aa12.53□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 LRRC10Q5BKY1 277 aa12.53□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 ARSJQ5FYB0 599 aaPredicted RBP12.53□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 COLCA1Q6ZS62 124 aa12.53□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 DHDDSQ86SQ9 333 aa12.53□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 PAPD5Q8NDF8 572 aaKnown RBP12.53□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 TNFRSF14Q92956 283 aa12.53□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 RCC1LQ96I51 464 aaKnown RBP12.53□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 Q96M85 177 aa12.53□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 NDEL1Q9GZM8 345 aa12.53□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 SYT4Q9H2B2 425 aa12.53□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 METTL8Q9H825 291 aaKnown RBP12.53□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 C14orf119Q9NWQ9 140 aa12.53□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 PRPF19Q9UMS4 504 aaKnown RBP12.53□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 SF3B6Q9Y3B4 125 aaKnown RBP12.53□□□□□ -0.4
NEDD8-MDP1-204ENST00000605847 A0A1B0GW55 424 aa12.52□□□□□ -0.41
NEDD8-MDP1-204ENST00000605847 A0A1W2PRX2 142 aa12.52□□□□□ -0.41
NEDD8-MDP1-204ENST00000605847 GGT3PA6NGU5 568 aa12.52□□□□□ -0.41
NEDD8-MDP1-204ENST00000605847 CD300LBA8K4G0 201 aa12.52□□□□□ -0.41
NEDD8-MDP1-204ENST00000605847 ADARB2-AS1A8MUL3 147 aa12.52□□□□□ -0.41
NEDD8-MDP1-204ENST00000605847 DUS4LO95620 317 aaKnown RBP12.52□□□□□ -0.41
NEDD8-MDP1-204ENST00000605847 LHBP01229 141 aa12.52□□□□□ -0.41
NEDD8-MDP1-204ENST00000605847 CD14P08571 375 aa12.52□□□□□ -0.41
NEDD8-MDP1-204ENST00000605847 DUX4L2P0CJ85 424 aa12.52□□□□□ -0.41
NEDD8-MDP1-204ENST00000605847 DUX4L3P0CJ86 424 aa12.52□□□□□ -0.41
NEDD8-MDP1-204ENST00000605847 DUX4L4P0CJ87 422 aa12.52□□□□□ -0.41
NEDD8-MDP1-204ENST00000605847 DUX4L5P0CJ88 424 aa12.52□□□□□ -0.41
NEDD8-MDP1-204ENST00000605847 DUX4L6P0CJ89 424 aa12.52□□□□□ -0.41
NEDD8-MDP1-204ENST00000605847 DUX4L7P0CJ90 424 aa12.52□□□□□ -0.41
NEDD8-MDP1-204ENST00000605847 GRK5P34947 590 aa12.52□□□□□ -0.41
NEDD8-MDP1-204ENST00000605847 GGT2P36268 569 aa12.52□□□□□ -0.41
NEDD8-MDP1-204ENST00000605847 OR1E2P47887 323 aa12.52□□□□□ -0.41
NEDD8-MDP1-204ENST00000605847 SLC9A3P48764 834 aa12.52□□□□□ -0.41
NEDD8-MDP1-204ENST00000605847 DOC2BQ14184 412 aa12.52□□□□□ -0.41
NEDD8-MDP1-204ENST00000605847 SELPLGQ14242 412 aa12.52□□□□□ -0.41
NEDD8-MDP1-204ENST00000605847 HABP2Q14520 560 aaPredicted RBP12.52□□□□□ -0.41
NEDD8-MDP1-204ENST00000605847 WDR38Q5JTN6 314 aa12.52□□□□□ -0.41
NEDD8-MDP1-204ENST00000605847 PGM2L1Q6PCE3 622 aa12.52□□□□□ -0.41
NEDD8-MDP1-204ENST00000605847 DUX4L9Q6RFH8 374 aaPredicted RBP12.52□□□□□ -0.41
NEDD8-MDP1-204ENST00000605847 EPGNQ6UW88 154 aa12.52□□□□□ -0.41
NEDD8-MDP1-204ENST00000605847 FAM216BQ8N7L0 139 aa12.52□□□□□ -0.41
NEDD8-MDP1-204ENST00000605847 SERTAD4Q9NUC0 356 aa12.52□□□□□ -0.41
NEDD8-MDP1-204ENST00000605847 DUX4Q9UBX2 424 aa12.52□□□□□ -0.41
NEDD8-MDP1-204ENST00000605847 A0A1W2PQ09 198 aa12.51□□□□□ -0.41
NEDD8-MDP1-204ENST00000605847 C3orf84H3BNL1 204 aa12.51□□□□□ -0.41
NEDD8-MDP1-204ENST00000605847 M0R1W7 72 aa12.51□□□□□ -0.41
NEDD8-MDP1-204ENST00000605847 ACSM4P0C7M7 580 aa12.51□□□□□ -0.41
NEDD8-MDP1-204ENST00000605847 PAICSP22234 425 aaKnown RBP12.51□□□□□ -0.41
NEDD8-MDP1-204ENST00000605847 KRTAP10-11P60412 298 aa12.51□□□□□ -0.41
NEDD8-MDP1-204ENST00000605847 HIST1H3AP68431 136 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms