RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 ELF3P78545 371 aaPredicted RBP8.95□□□□□ -0.98
TUBE1-210ENST00000604967 LCN2P80188 198 aa8.95□□□□□ -0.98
TUBE1-210ENST00000604967 EFNB1P98172 346 aa8.95□□□□□ -0.98
TUBE1-210ENST00000604967 PAX2Q02962 417 aa8.95□□□□□ -0.98
TUBE1-210ENST00000604967 ATP6AP1Q15904 470 aa8.95□□□□□ -0.98
TUBE1-210ENST00000604967 SLC27A4Q6P1M0 643 aa8.95□□□□□ -0.98
TUBE1-210ENST00000604967 AMIGO2Q86SJ2 522 aa8.95□□□□□ -0.98
TUBE1-210ENST00000604967 MOGAT3Q86VF5 341 aa8.95□□□□□ -0.98
TUBE1-210ENST00000604967 LRRC28Q86X40 367 aaPredicted RBP8.95□□□□□ -0.98
TUBE1-210ENST00000604967 ERI1Q8IV48 349 aaKnown RBP8.95□□□□□ -0.98
TUBE1-210ENST00000604967 RFLNBQ8N5W9 214 aa8.95□□□□□ -0.98
TUBE1-210ENST00000604967 ATG16L2Q8NAA4 619 aa8.95□□□□□ -0.98
TUBE1-210ENST00000604967 OR13G1Q8NGZ3 307 aa8.95□□□□□ -0.98
TUBE1-210ENST00000604967 SPSB4Q96A44 273 aa8.95□□□□□ -0.98
TUBE1-210ENST00000604967 SGK3Q96BR1 496 aa8.95□□□□□ -0.98
TUBE1-210ENST00000604967 ZNF582Q96NG8 517 aaPredicted RBP8.95□□□□□ -0.98
TUBE1-210ENST00000604967 DIRC2Q96SL1 478 aa8.95□□□□□ -0.98
TUBE1-210ENST00000604967 INTS14Q96SY0 518 aa8.95□□□□□ -0.98
TUBE1-210ENST00000604967 TMEM165Q9HC07 324 aa8.95□□□□□ -0.98
TUBE1-210ENST00000604967 SLC25A19Q9HC21 320 aa8.95□□□□□ -0.98
TUBE1-210ENST00000604967 CENPMQ9NSP4 180 aa8.95□□□□□ -0.98
TUBE1-210ENST00000604967 UBAP1Q9NZ09 502 aa8.95□□□□□ -0.98
TUBE1-210ENST00000604967 PPP1R3CQ9UQK1 317 aa8.95□□□□□ -0.98
TUBE1-210ENST00000604967 ISPDA4D126 451 aa8.94□□□□□ -0.98
TUBE1-210ENST00000604967 RNF212BA8MTL3 300 aa8.94□□□□□ -0.98
TUBE1-210ENST00000604967 GNGT2O14610 69 aa8.94□□□□□ -0.98
TUBE1-210ENST00000604967 PRKYO43930 277 aa8.94□□□□□ -0.98
TUBE1-210ENST00000604967 E2F6O75461 281 aa8.94□□□□□ -0.98
TUBE1-210ENST00000604967 PTBP3O95758 552 aaKnown RBP8.94□□□□□ -0.98
TUBE1-210ENST00000604967 NAA10P41227 235 aaPredicted RBP8.94□□□□□ -0.98
TUBE1-210ENST00000604967 GATA4P43694 442 aa8.94□□□□□ -0.98
TUBE1-210ENST00000604967 TPTEP56180 551 aa8.94□□□□□ -0.98
TUBE1-210ENST00000604967 ZNF121P58317 390 aaPredicted RBP8.94□□□□□ -0.98
TUBE1-210ENST00000604967 BTG1P62324 171 aa8.94□□□□□ -0.98
TUBE1-210ENST00000604967 EIF2B1Q14232 305 aaKnown RBP8.94□□□□□ -0.98
TUBE1-210ENST00000604967 ZMAT1Q5H9K5 638 aa8.94□□□□□ -0.98
TUBE1-210ENST00000604967 LYPD2Q6UXB3 125 aa8.94□□□□□ -0.98
TUBE1-210ENST00000604967 PGAP1Q75T13 922 aa8.94□□□□□ -0.98
TUBE1-210ENST00000604967 ASRGL1Q7L266 308 aa8.94□□□□□ -0.98
TUBE1-210ENST00000604967 GLCCI1Q86VQ1 547 aa8.94□□□□□ -0.98
TUBE1-210ENST00000604967 C11orf53Q8IXP5 236 aa8.94□□□□□ -0.98
TUBE1-210ENST00000604967 DEFB108BQ8NET1 73 aa8.94□□□□□ -0.98
TUBE1-210ENST00000604967 OR5L1Q8NGL2 311 aa8.94□□□□□ -0.98
TUBE1-210ENST00000604967 OR6N2Q8NGY6 317 aa8.94□□□□□ -0.98
TUBE1-210ENST00000604967 OR51F2Q8NH61 342 aa8.94□□□□□ -0.98
TUBE1-210ENST00000604967 LRTOMTQ8WZ04 291 aa8.94□□□□□ -0.98
TUBE1-210ENST00000604967 RAB1CQ92928 201 aa8.94□□□□□ -0.98
TUBE1-210ENST00000604967 POP5Q969H6 163 aaKnown RBP8.94□□□□□ -0.98
TUBE1-210ENST00000604967 DACT3Q96B18 629 aaPredicted RBP8.94□□□□□ -0.98
TUBE1-210ENST00000604967 OTULINQ96BN8 352 aa8.94□□□□□ -0.98
TUBE1-210ENST00000604967 DUS3LQ96G46 650 aaKnown RBP8.94□□□□□ -0.98
TUBE1-210ENST00000604967 LYZL4Q96KX0 146 aa8.94□□□□□ -0.98
TUBE1-210ENST00000604967 COG8Q96MW5 612 aa8.94□□□□□ -0.98
TUBE1-210ENST00000604967 KCNJ15Q99712 375 aa8.94□□□□□ -0.98
TUBE1-210ENST00000604967 GAL3ST1Q99999 423 aa8.94□□□□□ -0.98
TUBE1-210ENST00000604967 COPS4Q9BT78 406 aa8.94□□□□□ -0.98
TUBE1-210ENST00000604967 DNAJC27Q9NZQ0 273 aa8.94□□□□□ -0.98
TUBE1-210ENST00000604967 COPS3Q9UNS2 423 aa8.94□□□□□ -0.98
TUBE1-210ENST00000604967 N6AMT1Q9Y5N5 214 aa8.94□□□□□ -0.98
TUBE1-210ENST00000604967 SOX21Q9Y651 276 aaPredicted RBP8.94□□□□□ -0.98
TUBE1-210ENST00000604967 FBN3Q75N90 2809 aa8.94□□□□□ -0.98
TUBE1-210ENST00000604967 TRAV20A0A0B4J274 112 aa8.93□□□□□ -0.98
TUBE1-210ENST00000604967 CEACAM18A8MTB9 384 aa8.93□□□□□ -0.98
TUBE1-210ENST00000604967 ZNF878C9JN71 531 aa8.93□□□□□ -0.98
TUBE1-210ENST00000604967 TNFRSF13BO14836 293 aaPredicted RBP8.93□□□□□ -0.98
TUBE1-210ENST00000604967 FAM20BO75063 409 aa8.93□□□□□ -0.98
TUBE1-210ENST00000604967 RGS9O75916 674 aaPredicted RBP8.93□□□□□ -0.98
TUBE1-210ENST00000604967 VENTXO95231 258 aa8.93□□□□□ -0.98
TUBE1-210ENST00000604967 IFNGP01579 166 aa8.93□□□□□ -0.98
TUBE1-210ENST00000604967 ANXA8P13928 327 aa8.93□□□□□ -0.98
TUBE1-210ENST00000604967 ACKR3P25106 362 aa8.93□□□□□ -0.98
TUBE1-210ENST00000604967 THBS2P35442 1172 aa8.93□□□□□ -0.98
TUBE1-210ENST00000604967 CD200P41217 278 aa8.93□□□□□ -0.98
TUBE1-210ENST00000604967 SLC6A9P48067 706 aa8.93□□□□□ -0.98
TUBE1-210ENST00000604967 CX3CR1P49238 355 aa8.93□□□□□ -0.98
TUBE1-210ENST00000604967 CRISP1P54107 249 aa8.93□□□□□ -0.98
TUBE1-210ENST00000604967 FAM3AP98173 230 aa8.93□□□□□ -0.98
TUBE1-210ENST00000604967 PTGES3Q15185 160 aaKnown RBP8.93□□□□□ -0.98
TUBE1-210ENST00000604967 TUSC1Q2TAM9 212 aa8.93□□□□□ -0.98
TUBE1-210ENST00000604967 KDM4DQ6B0I6 523 aa8.93□□□□□ -0.98
TUBE1-210ENST00000604967 FAHD2BQ6P2I3 314 aaPredicted RBP8.93□□□□□ -0.98
TUBE1-210ENST00000604967 DRAM2Q6UX65 266 aa8.93□□□□□ -0.98
TUBE1-210ENST00000604967 ZNF826PQ6ZT77 177 aa8.93□□□□□ -0.98
TUBE1-210ENST00000604967 OR56B2PQ8NGI1 322 aa8.93□□□□□ -0.98
TUBE1-210ENST00000604967 OTOSQ8NHW6 89 aa8.93□□□□□ -0.98
TUBE1-210ENST00000604967 SPTSSAQ969W0 71 aa8.93□□□□□ -0.98
TUBE1-210ENST00000604967 PPP1R14AQ96A00 147 aa8.93□□□□□ -0.98
TUBE1-210ENST00000604967 FAHD2AQ96GK7 314 aa8.93□□□□□ -0.98
TUBE1-210ENST00000604967 TMEM246Q9BRR3 403 aa8.93□□□□□ -0.98
TUBE1-210ENST00000604967 METTL17Q9H7H0 456 aaPredicted RBP8.93□□□□□ -0.98
TUBE1-210ENST00000604967 PATZ1Q9HBE1 687 aaKnown RBP8.93□□□□□ -0.98
TUBE1-210ENST00000604967 PAPOLBQ9NRJ5 636 aaKnown RBP8.93□□□□□ -0.98
TUBE1-210ENST00000604967 UFSP2Q9NUQ7 469 aa8.93□□□□□ -0.98
TUBE1-210ENST00000604967 TMEM100Q9NV29 134 aa8.93□□□□□ -0.98
TUBE1-210ENST00000604967 WNK2Q9Y3S1 2297 aa8.93□□□□□ -0.98
TUBE1-210ENST00000604967 hCG_38984A0A1B0GV85 526 aa8.92□□□□□ -0.98
TUBE1-210ENST00000604967 PRR23D1E9PI22 279 aaPredicted RBP8.92□□□□□ -0.98
TUBE1-210ENST00000604967 H3BNX3 289 aa8.92□□□□□ -0.98
TUBE1-210ENST00000604967 PSMD9O00233 223 aa8.92□□□□□ -0.98
TUBE1-210ENST00000604967 MAGEB4O15481 346 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms