RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 ALPK2Q86TB3 2170 aa10.32□□□□□ -0.76
VRK3-223ENST00000601341 PSMD9O00233 223 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 SULT1C2O00338 296 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 SLC17A2O00624 439 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 KHDRBS3O75525 346 aaKnown RBP10.31□□□□□ -0.76
VRK3-223ENST00000601341 NDUFB6O95139 128 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 ISG15P05161 165 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 CD2P06729 351 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 CSF1P09603 554 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 CTLA4P16410 223 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 HTR2BP41595 481 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 TAS2R20P59543 309 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 C3AR1Q16581 482 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 FAM166AQ6J272 317 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 FAM180AQ6UWF9 173 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 GLDNQ6ZMI3 551 aaPredicted RBP10.31□□□□□ -0.76
VRK3-223ENST00000601341 WDFY1Q8IWB7 410 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 PRSS35Q8N3Z0 413 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 ZIC4Q8N9L1 334 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 KDF1Q8NAX2 398 aaPredicted RBP10.31□□□□□ -0.76
VRK3-223ENST00000601341 NOXO1Q8NFA2 376 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 ANGPTL6Q8NI99 470 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 ABHD3Q8WU67 409 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 SNAPC3Q92966 411 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 SLX1AQ9BQ83 275 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 DLL4Q9NR61 685 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 ZNF407Q9C0G0 2248 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 IGKV3D-15A0A087WSY6 115 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 OR14I1A6ND48 311 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 TVP23AA6NH52 213 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 SSNA1O43805 119 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 ICMTO60725 284 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 RBBP9O75884 186 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 AQP8O94778 261 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 HRGP04196 525 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 MELTFP08582 738 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 KIR3DL2P43630 455 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 RIDAP52758 137 aaKnown RBP10.31□□□□□ -0.76
VRK3-223ENST00000601341 PER3P56645 1201 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 DHODHQ02127 395 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 RNPS1Q15287 305 aaKnown RBP10.31□□□□□ -0.76
VRK3-223ENST00000601341 HIST3H3Q16695 136 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 KRTCAP3Q53RY4 240 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 WDR38Q5JTN6 314 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 CARD17Q5XLA6 110 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 TEX261Q6UWH6 196 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 GLB1L2Q8IW92 636 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 FNDC9Q8TBE3 224 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 PTX4Q96A99 478 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 INTS12Q96CB8 462 aaKnown RBP10.31□□□□□ -0.76
VRK3-223ENST00000601341 ZNF436Q9C0F3 470 aaPredicted RBP10.31□□□□□ -0.76
VRK3-223ENST00000601341 SLCO5A1Q9H2Y9 848 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 ELOVL3Q9HB03 270 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 LUZP4Q9P127 313 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 CKLFQ9UBR5 152 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 KCNG2Q9UJ96 466 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 ZNF175Q9Y473 711 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 U3KQ87 197 aa10.31□□□□□ -0.76
VRK3-223ENST00000601341 TRAV8-7A0A075B6U6 113 aa10.3□□□□□ -0.76
VRK3-223ENST00000601341 LOC100289279A0A1B0GTE1 492 aa10.3□□□□□ -0.76
VRK3-223ENST00000601341 A0A1B0GTH9 108 aa10.3□□□□□ -0.76
VRK3-223ENST00000601341 GGT3PA6NGU5 568 aa10.3□□□□□ -0.76
VRK3-223ENST00000601341 SLC22A20A6NK97 555 aa10.3□□□□□ -0.76
VRK3-223ENST00000601341 AKR7A2O43488 359 aa10.3□□□□□ -0.76
VRK3-223ENST00000601341 GMDSO60547 372 aa10.3□□□□□ -0.76
VRK3-223ENST00000601341 WISP2O76076 250 aa10.3□□□□□ -0.76
VRK3-223ENST00000601341 HLA-DQA2P01906 255 aa10.3□□□□□ -0.76
VRK3-223ENST00000601341 GIPP09681 153 aaPredicted RBP10.3□□□□□ -0.76
VRK3-223ENST00000601341 FCGR2AP12318 317 aa10.3□□□□□ -0.76
VRK3-223ENST00000601341 CXCL3P19876 107 aa10.3□□□□□ -0.76
VRK3-223ENST00000601341 PTGS2P35354 604 aa10.3□□□□□ -0.76
VRK3-223ENST00000601341 CSNK1A1P48729 337 aa10.3□□□□□ -0.76
VRK3-223ENST00000601341 FMODQ06828 376 aa10.3□□□□□ -0.76
VRK3-223ENST00000601341 RBMS2Q15434 407 aaKnown RBP10.3□□□□□ -0.76
VRK3-223ENST00000601341 MEP1BQ16820 701 aa10.3□□□□□ -0.76
VRK3-223ENST00000601341 UTS2BQ765I0 119 aa10.3□□□□□ -0.76
VRK3-223ENST00000601341 MCEMP1Q8IX19 187 aa10.3□□□□□ -0.76
VRK3-223ENST00000601341 CDH26Q8IXH8 852 aa10.3□□□□□ -0.76
VRK3-223ENST00000601341 TMEM123Q8N131 208 aa10.3□□□□□ -0.76
VRK3-223ENST00000601341 OR6N1Q8NGY5 312 aa10.3□□□□□ -0.76
VRK3-223ENST00000601341 ZNF775Q96BV0 537 aaPredicted RBP10.3□□□□□ -0.76
VRK3-223ENST00000601341 SORCS2Q96PQ0 1159 aa10.3□□□□□ -0.76
VRK3-223ENST00000601341 TMPRSS13Q9BYE2 586 aa10.3□□□□□ -0.76
VRK3-223ENST00000601341 RNF122Q9H9V4 155 aa10.3□□□□□ -0.76
VRK3-223ENST00000601341 NOX3Q9HBY0 568 aa10.3□□□□□ -0.76
VRK3-223ENST00000601341 MRPL22Q9NWU5 206 aaKnown RBP10.3□□□□□ -0.76
VRK3-223ENST00000601341 KLK11Q9UBX7 282 aa10.3□□□□□ -0.76
VRK3-223ENST00000601341 COA3Q9Y2R0 106 aaPredicted RBP10.3□□□□□ -0.76
VRK3-223ENST00000601341 DNAJC13O75165 2243 aa10.3□□□□□ -0.76
VRK3-223ENST00000601341 LINC00862A6NCI5 91 aa10.29□□□□□ -0.76
VRK3-223ENST00000601341 TUBAL3A6NHL2 446 aa10.29□□□□□ -0.76
VRK3-223ENST00000601341 ZNF724A8MTY0 619 aa10.29□□□□□ -0.76
VRK3-223ENST00000601341 CREBL2O60519 120 aaPredicted RBP10.29□□□□□ -0.76
VRK3-223ENST00000601341 OR2A4O95047 310 aa10.29□□□□□ -0.76
VRK3-223ENST00000601341 DNASE1P24855 282 aa10.29□□□□□ -0.76
VRK3-223ENST00000601341 DCTDP32321 178 aa10.29□□□□□ -0.76
VRK3-223ENST00000601341 SOX2P48431 317 aa10.29□□□□□ -0.76
VRK3-223ENST00000601341 SELENOPP49908 381 aa10.29□□□□□ -0.76
VRK3-223ENST00000601341 ACTBP60709 375 aa10.29□□□□□ -0.76
VRK3-223ENST00000601341 RAP2BP61225 183 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms