RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 TPTEP56180 551 aa14.93□□□□□ -0.02
CHMP2A-208ENST00000601220 RELBQ01201 579 aa14.93□□□□□ -0.02
CHMP2A-208ENST00000601220 SPIBQ01892 262 aa14.93□□□□□ -0.02
CHMP2A-208ENST00000601220 MALLQ13021 153 aa14.93□□□□□ -0.02
CHMP2A-208ENST00000601220 SNAI3Q3KNW1 292 aa14.93□□□□□ -0.02
CHMP2A-208ENST00000601220 ZNF620Q6ZNG0 422 aa14.93□□□□□ -0.02
CHMP2A-208ENST00000601220 SPATC1Q76KD6 591 aa14.93□□□□□ -0.02
CHMP2A-208ENST00000601220 SPRYD4Q8WW59 207 aaPredicted RBP14.93□□□□□ -0.02
CHMP2A-208ENST00000601220 TBX15Q96SF7 602 aa14.93□□□□□ -0.02
CHMP2A-208ENST00000601220 NOX4Q9NPH5 578 aa14.93□□□□□ -0.02
CHMP2A-208ENST00000601220 RNF7Q9UBF6 113 aa14.93□□□□□ -0.02
CHMP2A-208ENST00000601220 KCNG2Q9UJ96 466 aa14.93□□□□□ -0.02
CHMP2A-208ENST00000601220 V9GYQ6 96 aa14.93□□□□□ -0.02
CHMP2A-208ENST00000601220 FAM181BA6NEQ2 426 aa14.92□□□□□ -0.02
CHMP2A-208ENST00000601220 M0R135 149 aa14.92□□□□□ -0.02
CHMP2A-208ENST00000601220 LGALS8O00214 317 aa14.92□□□□□ -0.02
CHMP2A-208ENST00000601220 ENSAO43768 121 aaKnown RBP14.92□□□□□ -0.02
CHMP2A-208ENST00000601220 OR10H3O60404 316 aa14.92□□□□□ -0.02
CHMP2A-208ENST00000601220 RPS27P42677 84 aaKnown RBP14.92□□□□□ -0.02
CHMP2A-208ENST00000601220 NPY4RP50391 375 aa14.92□□□□□ -0.02
CHMP2A-208ENST00000601220 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.92□□□□□ -0.02
CHMP2A-208ENST00000601220 SRSF4Q08170 494 aaKnown RBP14.92□□□□□ -0.02
CHMP2A-208ENST00000601220 TSPAN31Q12999 210 aa14.92□□□□□ -0.02
CHMP2A-208ENST00000601220 OR8G1Q15617 311 aa14.92□□□□□ -0.02
CHMP2A-208ENST00000601220 SLC35F1Q5T1Q4 408 aa14.92□□□□□ -0.02
CHMP2A-208ENST00000601220 RUSC1-AS1Q66K80 236 aa14.92□□□□□ -0.02
CHMP2A-208ENST00000601220 SFRP4Q6FHJ7 346 aaPredicted RBP14.92□□□□□ -0.02
CHMP2A-208ENST00000601220 PGBD2Q6P3X8 592 aa14.92□□□□□ -0.02
CHMP2A-208ENST00000601220 PLPP7Q8NBV4 271 aa14.92□□□□□ -0.02
CHMP2A-208ENST00000601220 ZNF799Q96GE5 643 aa14.92□□□□□ -0.02
CHMP2A-208ENST00000601220 SLC22A4Q9H015 551 aa14.92□□□□□ -0.02
CHMP2A-208ENST00000601220 ADA2Q9NZK5 511 aa14.92□□□□□ -0.02
CHMP2A-208ENST00000601220 CD300AQ9UGN4 299 aa14.92□□□□□ -0.02
CHMP2A-208ENST00000601220 CENPVL3A0A0U1RRI6 287 aa14.91□□□□□ -0.02
CHMP2A-208ENST00000601220 ZNF879B4DU55 563 aa14.91□□□□□ -0.02
CHMP2A-208ENST00000601220 BHLHE40O14503 412 aa14.91□□□□□ -0.02
CHMP2A-208ENST00000601220 GMDSO60547 372 aa14.91□□□□□ -0.02
CHMP2A-208ENST00000601220 HLA-DQA2P01906 255 aa14.91□□□□□ -0.02
CHMP2A-208ENST00000601220 HSD17B1P14061 328 aa14.91□□□□□ -0.02
CHMP2A-208ENST00000601220 NOS3P29474 1203 aa14.91□□□□□ -0.02
CHMP2A-208ENST00000601220 PYCR1P32322 319 aa14.91□□□□□ -0.02
CHMP2A-208ENST00000601220 OCLNQ16625 522 aa14.91□□□□□ -0.02
CHMP2A-208ENST00000601220 GLYATL3Q5SZD4 288 aa14.91□□□□□ -0.02
CHMP2A-208ENST00000601220 GPR157Q5UAW9 335 aa14.91□□□□□ -0.02
CHMP2A-208ENST00000601220 LYPD4Q6UWN0 246 aa14.91□□□□□ -0.02
CHMP2A-208ENST00000601220 MRPL21Q7Z2W9 205 aaKnown RBP14.91□□□□□ -0.02
CHMP2A-208ENST00000601220 OR2AE1Q8NHA4 323 aa14.91□□□□□ -0.02
CHMP2A-208ENST00000601220 GNPDA2Q8TDQ7 276 aa14.91□□□□□ -0.02
CHMP2A-208ENST00000601220 ZDHHC16Q969W1 377 aa14.91□□□□□ -0.02
CHMP2A-208ENST00000601220 CHIAQ9BZP6 476 aa14.91□□□□□ -0.02
CHMP2A-208ENST00000601220 FN3KRPQ9HA64 309 aa14.91□□□□□ -0.02
CHMP2A-208ENST00000601220 SMURF1Q9HCE7 757 aa14.91□□□□□ -0.02
CHMP2A-208ENST00000601220 C1RLQ9NZP8 487 aa14.91□□□□□ -0.02
CHMP2A-208ENST00000601220 TVP23AA6NH52 213 aa14.9□□□□□ -0.02
CHMP2A-208ENST00000601220 P2RY10O00398 339 aa14.9□□□□□ -0.02
CHMP2A-208ENST00000601220 LHBP01229 141 aa14.9□□□□□ -0.02
CHMP2A-208ENST00000601220 LIPFP07098 398 aa14.9□□□□□ -0.02
CHMP2A-208ENST00000601220 MELTFP08582 738 aa14.9□□□□□ -0.02
CHMP2A-208ENST00000601220 RRM2P31350 389 aa14.9□□□□□ -0.02
CHMP2A-208ENST00000601220 MSX2P35548 267 aaPredicted RBP14.9□□□□□ -0.02
CHMP2A-208ENST00000601220 HMGA2P52926 109 aa14.9□□□□□ -0.02
CHMP2A-208ENST00000601220 PCK2Q16822 640 aa14.9□□□□□ -0.02
CHMP2A-208ENST00000601220 PDLIM3Q53GG5 364 aaPredicted RBP14.9□□□□□ -0.02
CHMP2A-208ENST00000601220 CD276Q5ZPR3 534 aa14.9□□□□□ -0.02
CHMP2A-208ENST00000601220 FIP1L1Q6UN15 594 aaKnown RBP14.9□□□□□ -0.02
CHMP2A-208ENST00000601220 TMEM86BQ8N661 226 aa14.9□□□□□ -0.02
CHMP2A-208ENST00000601220 KIR3DL3Q8N743 410 aa14.9□□□□□ -0.02
CHMP2A-208ENST00000601220 CYB561A3Q8NBI2 242 aa14.9□□□□□ -0.02
CHMP2A-208ENST00000601220 WFDC12Q8WWY7 111 aa14.9□□□□□ -0.02
CHMP2A-208ENST00000601220 SPTSSAQ969W0 71 aa14.9□□□□□ -0.02
CHMP2A-208ENST00000601220 ELAC2Q9BQ52 826 aaKnown RBP14.9□□□□□ -0.02
CHMP2A-208ENST00000601220 PCGF1Q9BSM1 259 aa14.9□□□□□ -0.02
CHMP2A-208ENST00000601220 SIRPDQ9H106 197 aa14.9□□□□□ -0.02
CHMP2A-208ENST00000601220 RASSF4Q9H2L5 321 aa14.9□□□□□ -0.02
CHMP2A-208ENST00000601220 EGLN3Q9H6Z9 239 aa14.9□□□□□ -0.02
CHMP2A-208ENST00000601220 MARCH7Q9H992 704 aa14.9□□□□□ -0.02
CHMP2A-208ENST00000601220 IL1RAPQ9NPH3 570 aa14.9□□□□□ -0.02
CHMP2A-208ENST00000601220 MRPL15Q9P015 296 aaKnown RBP14.9□□□□□ -0.02
CHMP2A-208ENST00000601220 ERVK-18Q9QC07 812 aa14.9□□□□□ -0.02
CHMP2A-208ENST00000601220 A0A1B0GUS0 222 aa14.89□□□□□ -0.03
CHMP2A-208ENST00000601220 C3orf80F5H4A9 247 aa14.89□□□□□ -0.03
CHMP2A-208ENST00000601220 GMNNO75496 209 aa14.89□□□□□ -0.03
CHMP2A-208ENST00000601220 NDUFA7O95182 113 aa14.89□□□□□ -0.03
CHMP2A-208ENST00000601220 FABP3P05413 133 aa14.89□□□□□ -0.03
CHMP2A-208ENST00000601220 ZNF823P16415 610 aa14.89□□□□□ -0.03
CHMP2A-208ENST00000601220 IFNGR2P38484 337 aa14.89□□□□□ -0.03
CHMP2A-208ENST00000601220 DEFA6Q01524 100 aa14.89□□□□□ -0.03
CHMP2A-208ENST00000601220 DRAM2Q6UX65 266 aa14.89□□□□□ -0.03
CHMP2A-208ENST00000601220 ZNF826PQ6ZT77 177 aa14.89□□□□□ -0.03
CHMP2A-208ENST00000601220 C11orf53Q8IXP5 236 aa14.89□□□□□ -0.03
CHMP2A-208ENST00000601220 GCSAMQ8N6F7 178 aa14.89□□□□□ -0.03
CHMP2A-208ENST00000601220 WDFY2Q96P53 400 aa14.89□□□□□ -0.03
CHMP2A-208ENST00000601220 TECTBQ96PL2 329 aa14.89□□□□□ -0.03
CHMP2A-208ENST00000601220 ADAT1Q9BUB4 502 aaKnown RBP14.89□□□□□ -0.03
CHMP2A-208ENST00000601220 TNFRSF19Q9NS68 423 aa14.89□□□□□ -0.03
CHMP2A-208ENST00000601220 C1orf123Q9NWV4 160 aa14.89□□□□□ -0.03
CHMP2A-208ENST00000601220 IL20Q9NYY1 176 aa14.89□□□□□ -0.03
CHMP2A-208ENST00000601220 PDP1Q9P0J1 537 aaPredicted RBP14.89□□□□□ -0.03
CHMP2A-208ENST00000601220 MAGEL2Q9UJ55 1249 aa14.89□□□□□ -0.03
CHMP2A-208ENST00000601220 NOP16Q9Y3C1 178 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms