RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 GYPAP02724 150 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 CSF1P09603 554 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 DUX4L2P0CJ85 424 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 DUX4L3P0CJ86 424 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 DUX4L4P0CJ87 422 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 DUX4L5P0CJ88 424 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 DUX4L6P0CJ89 424 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 DUX4L7P0CJ90 424 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 IRF2P14316 349 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 CA6P23280 308 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 GGT2P36268 569 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 RPL4P36578 427 aaKnown RBP5.01□□□□□ -1.61
VRK3-220ENST00000600259 TGFBR2P37173 567 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 MDH1P40925 334 aaKnown RBP5.01□□□□□ -1.61
VRK3-220ENST00000600259 OMPP47874 163 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 TGM4P49221 684 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 EFNB2P52799 333 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 DLX1P56177 255 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 EGR3Q06889 387 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 POU4F2Q12837 409 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 C2orf68Q2NKX9 166 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 CDONQ4KMG0 1287 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 LRRC23Q53EV4 343 aaPredicted RBP5.01□□□□□ -1.61
VRK3-220ENST00000600259 COQ5Q5HYK3 327 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 METTL11BQ5VVY1 283 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 TEX36Q5VZQ5 186 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 SLC18B1Q6NT16 456 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 CRIP3Q6Q6R5 217 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 DUX4L9Q6RFH8 374 aaPredicted RBP5.01□□□□□ -1.61
VRK3-220ENST00000600259 GDPGP1Q6ZNW5 385 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 PDZD9Q8IXQ8 264 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 SLC26A10Q8NG04 563 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 OR11L1Q8NGX0 322 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 PPP1R35Q8TAP8 253 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 NPRL2Q8WTW4 380 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 TPD52L3Q96J77 140 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 DMRTB1Q96MA1 342 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 ZNF570Q96NI8 536 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 TECTBQ96PL2 329 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 DDOQ99489 341 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 SH3GL1Q99961 368 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 FUZQ9BT04 418 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 FNDC11Q9BVV2 318 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 HCAR1Q9BXC0 346 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 DPAGT1Q9H3H5 408 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 SRA1Q9HD15 236 aaKnown RBP5.01□□□□□ -1.61
VRK3-220ENST00000600259 CMTM6Q9NX76 183 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 ADA2Q9NZK5 511 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 ZNRD1Q9P1U0 126 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 DUX4Q9UBX2 424 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 CYB5R1Q9UHQ9 305 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 RPS6KA6Q9UK32 745 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 VPREB3Q9UKI3 123 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 SIGLEC9Q9Y336 463 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 IER3IP1Q9Y5U9 82 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 KPTNQ9Y664 436 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 PLXNB1O43157 2135 aa5□□□□□ -1.61
VRK3-220ENST00000600259 ELOVL7A1L3X0 281 aa5□□□□□ -1.61
VRK3-220ENST00000600259 FAM220BPB1ANY3 271 aa5□□□□□ -1.61
VRK3-220ENST00000600259 F5H5K5 113 aa5□□□□□ -1.61
VRK3-220ENST00000600259 MRASO14807 208 aa5□□□□□ -1.61
VRK3-220ENST00000600259 GMDSO60547 372 aa5□□□□□ -1.61
VRK3-220ENST00000600259 EDF1O60869 148 aaKnown RBP5□□□□□ -1.61
VRK3-220ENST00000600259 LCATP04180 440 aa5□□□□□ -1.61
VRK3-220ENST00000600259 IFNW1P05000 195 aa5□□□□□ -1.61
VRK3-220ENST00000600259 PSKH1P11801 424 aa5□□□□□ -1.61
VRK3-220ENST00000600259 CRABP1P29762 137 aa5□□□□□ -1.61
VRK3-220ENST00000600259 OTX1P32242 354 aaPredicted RBP5□□□□□ -1.61
VRK3-220ENST00000600259 KIR2DS4P43632 304 aa5□□□□□ -1.61
VRK3-220ENST00000600259 ZNF92Q03936 586 aa5□□□□□ -1.61
VRK3-220ENST00000600259 PRB3Q04118 309 aaPredicted RBP5□□□□□ -1.61
VRK3-220ENST00000600259 TRAP1Q12931 704 aaKnown RBP5□□□□□ -1.61
VRK3-220ENST00000600259 ECH1Q13011 328 aa5□□□□□ -1.61
VRK3-220ENST00000600259 KLF10Q13118 480 aa5□□□□□ -1.61
VRK3-220ENST00000600259 HERPUD1Q15011 391 aa5□□□□□ -1.61
VRK3-220ENST00000600259 SEC23BQ15437 767 aa5□□□□□ -1.61
VRK3-220ENST00000600259 OR8G1Q15617 311 aa5□□□□□ -1.61
VRK3-220ENST00000600259 KCNJ8Q15842 424 aa5□□□□□ -1.61
VRK3-220ENST00000600259 SNAI3Q3KNW1 292 aa5□□□□□ -1.61
VRK3-220ENST00000600259 ATPAF1Q5TC12 328 aaPredicted RBP5□□□□□ -1.61
VRK3-220ENST00000600259 HCP5Q6MZN7 132 aa5□□□□□ -1.61
VRK3-220ENST00000600259 PGM2L1Q6PCE3 622 aa5□□□□□ -1.61
VRK3-220ENST00000600259 ZNF730Q6ZMV8 503 aa5□□□□□ -1.61
VRK3-220ENST00000600259 DPY19L2P2Q6ZN68 376 aa5□□□□□ -1.61
VRK3-220ENST00000600259 CBLL1Q75N03 491 aa5□□□□□ -1.61
VRK3-220ENST00000600259 PGAP1Q75T13 922 aa5□□□□□ -1.61
VRK3-220ENST00000600259 VMO1Q7Z5L0 202 aa5□□□□□ -1.61
VRK3-220ENST00000600259 WDR86Q86TI4 376 aa5□□□□□ -1.61
VRK3-220ENST00000600259 ADCK1Q86TW2 530 aa5□□□□□ -1.61
VRK3-220ENST00000600259 ZBTB46Q86UZ6 589 aa5□□□□□ -1.61
VRK3-220ENST00000600259 LINC00346Q8IVM7 164 aa5□□□□□ -1.61
VRK3-220ENST00000600259 SLC15A3Q8IY34 581 aa5□□□□□ -1.61
VRK3-220ENST00000600259 PNKDQ8N490 385 aa5□□□□□ -1.61
VRK3-220ENST00000600259 BOLLQ8N9W6 283 aaKnown RBP5□□□□□ -1.61
VRK3-220ENST00000600259 OR2T12Q8NG77 320 aa5□□□□□ -1.61
VRK3-220ENST00000600259 LRTOMTQ8WZ04 291 aa5□□□□□ -1.61
VRK3-220ENST00000600259 SEH1LQ96EE3 360 aa5□□□□□ -1.61
VRK3-220ENST00000600259 FAM46AQ96IP4 442 aaKnown RBP5□□□□□ -1.61
VRK3-220ENST00000600259 MAP6Q96JE9 813 aa5□□□□□ -1.61
VRK3-220ENST00000600259 C7orf34Q96L11 122 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms