RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 TP53I3Q53FA7 332 aa16.17■□□□□ 0.18
CCDC9-205ENST00000600117 SPATA46Q5T0L3 261 aa16.17■□□□□ 0.18
CCDC9-205ENST00000600117 RGS7BPQ6MZT1 257 aaPredicted RBP16.17■□□□□ 0.18
CCDC9-205ENST00000600117 PLEKHG7Q6ZR37 379 aa16.17■□□□□ 0.18
CCDC9-205ENST00000600117 C1orf174Q8IYL3 243 aa16.17■□□□□ 0.18
CCDC9-205ENST00000600117 ZNF540Q8NDQ6 660 aa16.17■□□□□ 0.18
CCDC9-205ENST00000600117 SLC25A40Q8TBP6 338 aa16.17■□□□□ 0.18
CCDC9-205ENST00000600117 SNX33Q8WV41 574 aa16.17■□□□□ 0.18
CCDC9-205ENST00000600117 SGCDQ92629 289 aa16.17■□□□□ 0.18
CCDC9-205ENST00000600117 RNF166Q96A37 237 aaPredicted RBP16.17■□□□□ 0.18
CCDC9-205ENST00000600117 COX4I2Q96KJ9 171 aa16.17■□□□□ 0.18
CCDC9-205ENST00000600117 ALG8Q9BVK2 526 aa16.17■□□□□ 0.18
CCDC9-205ENST00000600117 OR2J1Q9GZK6 312 aa16.17■□□□□ 0.18
CCDC9-205ENST00000600117 BEX4Q9NWD9 120 aaPredicted RBP16.17■□□□□ 0.18
CCDC9-205ENST00000600117 FAM206AQ9NX38 181 aa16.17■□□□□ 0.18
CCDC9-205ENST00000600117 ZNF319Q9P2F9 582 aa16.17■□□□□ 0.18
CCDC9-205ENST00000600117 SONP18583 2426 aaKnown RBP16.16■□□□□ 0.18
CCDC9-205ENST00000600117 PNPP00491 289 aa16.16■□□□□ 0.18
CCDC9-205ENST00000600117 OR4A8P0C604 315 aa16.16■□□□□ 0.18
CCDC9-205ENST00000600117 ZNF250P15622 560 aa16.16■□□□□ 0.18
CCDC9-205ENST00000600117 TTKP33981 857 aa16.16■□□□□ 0.18
CCDC9-205ENST00000600117 MPV17P39210 176 aa16.16■□□□□ 0.18
CCDC9-205ENST00000600117 ETV1P50549 477 aa16.16■□□□□ 0.18
CCDC9-205ENST00000600117 FABP6P51161 128 aa16.16■□□□□ 0.18
CCDC9-205ENST00000600117 OR12D2P58182 307 aa16.16■□□□□ 0.18
CCDC9-205ENST00000600117 SLC35A2P78381 396 aa16.16■□□□□ 0.18
CCDC9-205ENST00000600117 MFGE8Q08431 387 aaPredicted RBP16.16■□□□□ 0.18
CCDC9-205ENST00000600117 MST1LQ2TV78 715 aa16.16■□□□□ 0.18
CCDC9-205ENST00000600117 TMEM255AQ5JRV8 349 aa16.16■□□□□ 0.18
CCDC9-205ENST00000600117 LIPNQ5VXI9 398 aa16.16■□□□□ 0.18
CCDC9-205ENST00000600117 UNQ6126/PRO20091Q6UXV3 157 aa16.16■□□□□ 0.18
CCDC9-205ENST00000600117 ZNF786Q8N393 782 aa16.16■□□□□ 0.18
CCDC9-205ENST00000600117 YIPF7Q8N8F6 280 aa16.16■□□□□ 0.18
CCDC9-205ENST00000600117 IGFBPL1Q8WX77 278 aa16.16■□□□□ 0.18
CCDC9-205ENST00000600117 MRPL24Q96A35 216 aaKnown RBP16.16■□□□□ 0.18
CCDC9-205ENST00000600117 SIGLEC11Q96RL6 698 aa16.16■□□□□ 0.18
CCDC9-205ENST00000600117 MRPL37Q9BZE1 423 aaKnown RBP16.16■□□□□ 0.18
CCDC9-205ENST00000600117 DUSP21Q9H596 190 aa16.16■□□□□ 0.18
CCDC9-205ENST00000600117 SCN3BQ9NY72 215 aa16.16■□□□□ 0.18
CCDC9-205ENST00000600117 EXOSC1Q9Y3B2 195 aaKnown RBP16.16■□□□□ 0.18
CCDC9-205ENST00000600117 CMAHPQ9Y471 501 aa16.16■□□□□ 0.18
CCDC9-205ENST00000600117 TMEM129A0AVI4 362 aa16.15■□□□□ 0.18
CCDC9-205ENST00000600117 PTGES3LE9PB15 166 aa16.15■□□□□ 0.18
CCDC9-205ENST00000600117 H3BSA7 217 aa16.15■□□□□ 0.18
CCDC9-205ENST00000600117 CDK1P06493 297 aa16.15■□□□□ 0.18
CCDC9-205ENST00000600117 TUBG1P23258 451 aa16.15■□□□□ 0.18
CCDC9-205ENST00000600117 C21orf33P30042 268 aaPredicted RBP16.15■□□□□ 0.18
CCDC9-205ENST00000600117 MMP16P51512 607 aa16.15■□□□□ 0.18
CCDC9-205ENST00000600117 ACTA2P62736 377 aa16.15■□□□□ 0.18
CCDC9-205ENST00000600117 ACTG2P63267 376 aa16.15■□□□□ 0.18
CCDC9-205ENST00000600117 MED21Q13503 144 aa16.15■□□□□ 0.18
CCDC9-205ENST00000600117 RBM48Q5RL73 367 aaKnown RBP16.15■□□□□ 0.18
CCDC9-205ENST00000600117 FAM57BQ71RH2 274 aa16.15■□□□□ 0.18
CCDC9-205ENST00000600117 KCTD20Q7Z5Y7 419 aa16.15■□□□□ 0.18
CCDC9-205ENST00000600117 DTX2Q86UW9 622 aa16.15■□□□□ 0.18
CCDC9-205ENST00000600117 LRP11Q86VZ4 500 aa16.15■□□□□ 0.18
CCDC9-205ENST00000600117 SYS1Q8N2H4 156 aa16.15■□□□□ 0.18
CCDC9-205ENST00000600117 KLF14Q8TD94 323 aaPredicted RBP16.15■□□□□ 0.18
CCDC9-205ENST00000600117 C4orf36Q96KX1 117 aa16.15■□□□□ 0.18
CCDC9-205ENST00000600117 COG8Q96MW5 612 aa16.15■□□□□ 0.18
CCDC9-205ENST00000600117 ISG20L2Q9H9L3 353 aaKnown RBP16.15■□□□□ 0.18
CCDC9-205ENST00000600117 BRD7Q9NPI1 651 aa16.15■□□□□ 0.18
CCDC9-205ENST00000600117 TUBG2Q9NRH3 451 aa16.15■□□□□ 0.18
CCDC9-205ENST00000600117 ACOXLQ9NUZ1 547 aa16.15■□□□□ 0.18
CCDC9-205ENST00000600117 PTTG3PQ9NZH4 202 aa16.15■□□□□ 0.18
CCDC9-205ENST00000600117 CLEC2DQ9UHP7 191 aa16.15■□□□□ 0.18
CCDC9-205ENST00000600117 GNG8Q9UK08 70 aa16.15■□□□□ 0.18
CCDC9-205ENST00000600117 FZR1Q9UM11 496 aa16.15■□□□□ 0.18
CCDC9-205ENST00000600117 TPRKBQ9Y3C4 175 aa16.15■□□□□ 0.18
CCDC9-205ENST00000600117 R4GMQ9 66 aa16.15■□□□□ 0.18
CCDC9-205ENST00000600117 IGLV3-9A0A075B6K5 115 aa16.14■□□□□ 0.17
CCDC9-205ENST00000600117 TMEM269A0A1B0GVZ9 245 aa16.14■□□□□ 0.17
CCDC9-205ENST00000600117 ACOD1A6NK06 481 aa16.14■□□□□ 0.17
CCDC9-205ENST00000600117 CLPTM1O96005 669 aa16.14■□□□□ 0.17
CCDC9-205ENST00000600117 CD8AP01732 235 aa16.14■□□□□ 0.17
CCDC9-205ENST00000600117 ANXA2P07355 339 aaKnown RBP16.14■□□□□ 0.17
CCDC9-205ENST00000600117 SOD3P08294 240 aa16.14■□□□□ 0.17
CCDC9-205ENST00000600117 CD53P19397 219 aa16.14■□□□□ 0.17
CCDC9-205ENST00000600117 SERPINF1P36955 418 aa16.14■□□□□ 0.17
CCDC9-205ENST00000600117 EFNB3Q15768 340 aa16.14■□□□□ 0.17
CCDC9-205ENST00000600117 ZNF829Q3KNS6 432 aaPredicted RBP16.14■□□□□ 0.17
CCDC9-205ENST00000600117 GLYATL3Q5SZD4 288 aa16.14■□□□□ 0.17
CCDC9-205ENST00000600117 MBNL2Q5VZF2 373 aaKnown RBP16.14■□□□□ 0.17
CCDC9-205ENST00000600117 C11orf71Q6IPW1 123 aa16.14■□□□□ 0.17
CCDC9-205ENST00000600117 FBXW12Q6X9E4 464 aa16.14■□□□□ 0.17
CCDC9-205ENST00000600117 C20orf204Q6ZNR8 217 aa16.14■□□□□ 0.17
CCDC9-205ENST00000600117 EGFL6Q8IUX8 553 aa16.14■□□□□ 0.17
CCDC9-205ENST00000600117 MUC15Q8N387 334 aa16.14■□□□□ 0.17
CCDC9-205ENST00000600117 STX19Q8N4C7 294 aa16.14■□□□□ 0.17
CCDC9-205ENST00000600117 OR8B12Q8NGG6 310 aa16.14■□□□□ 0.17
CCDC9-205ENST00000600117 OR5L1Q8NGL2 311 aa16.14■□□□□ 0.17
CCDC9-205ENST00000600117 RORBQ92753 470 aa16.14■□□□□ 0.17
CCDC9-205ENST00000600117 PELI1Q96FA3 418 aa16.14■□□□□ 0.17
CCDC9-205ENST00000600117 MRPL48Q96GC5 212 aaKnown RBP16.14■□□□□ 0.17
CCDC9-205ENST00000600117 SP140LQ9H930 580 aa16.14■□□□□ 0.17
CCDC9-205ENST00000600117 G6PC2Q9NQR9 355 aa16.14■□□□□ 0.17
CCDC9-205ENST00000600117 MYEF2Q9P2K5 600 aaKnown RBP16.14■□□□□ 0.17
CCDC9-205ENST00000600117 ERVK-18Q9QC07 812 aa16.14■□□□□ 0.17
CCDC9-205ENST00000600117 N6AMT1Q9Y5N5 214 aa16.14■□□□□ 0.17
CCDC9-205ENST00000600117 DSCAMO60469 2012 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms