RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 SPARCP09486 303 aa8.19□□□□□ -1.1
VRK3-216ENST00000599342 IGHV4-38-2P0DP08 117 aa8.19□□□□□ -1.1
VRK3-216ENST00000599342 HKR1P10072 659 aa8.19□□□□□ -1.1
VRK3-216ENST00000599342 CA6P23280 308 aa8.19□□□□□ -1.1
VRK3-216ENST00000599342 CD80P33681 288 aa8.19□□□□□ -1.1
VRK3-216ENST00000599342 MNAT1P51948 309 aa8.19□□□□□ -1.1
VRK3-216ENST00000599342 GNGT1P63211 74 aa8.19□□□□□ -1.1
VRK3-216ENST00000599342 MAB21L1Q13394 359 aa8.19□□□□□ -1.1
VRK3-216ENST00000599342 SNAI3Q3KNW1 292 aa8.19□□□□□ -1.1
VRK3-216ENST00000599342 PRAMEF6Q5VXH4 476 aa8.19□□□□□ -1.1
VRK3-216ENST00000599342 DRAM2Q6UX65 266 aa8.19□□□□□ -1.1
VRK3-216ENST00000599342 RASSF6Q6ZTQ3 369 aa8.19□□□□□ -1.1
VRK3-216ENST00000599342 DCXRQ7Z4W1 244 aa8.19□□□□□ -1.1
VRK3-216ENST00000599342 AQP11Q8NBQ7 271 aa8.19□□□□□ -1.1
VRK3-216ENST00000599342 SLC37A3Q8NCC5 494 aa8.19□□□□□ -1.1
VRK3-216ENST00000599342 OR51L1Q8NGJ5 315 aa8.19□□□□□ -1.1
VRK3-216ENST00000599342 UPRTQ96BW1 309 aa8.19□□□□□ -1.1
VRK3-216ENST00000599342 TECTBQ96PL2 329 aa8.19□□□□□ -1.1
VRK3-216ENST00000599342 NUDT16L1Q9BRJ7 211 aaKnown RBP8.19□□□□□ -1.1
VRK3-216ENST00000599342 BTBD10Q9BSF8 475 aa8.19□□□□□ -1.1
VRK3-216ENST00000599342 TRIM15Q9C019 465 aa8.19□□□□□ -1.1
VRK3-216ENST00000599342 MMADHCQ9H3L0 296 aaPredicted RBP8.19□□□□□ -1.1
VRK3-216ENST00000599342 OPA3Q9H6K4 179 aa8.19□□□□□ -1.1
VRK3-216ENST00000599342 IL20Q9NYY1 176 aa8.19□□□□□ -1.1
VRK3-216ENST00000599342 ACTR3BQ9P1U1 418 aa8.19□□□□□ -1.1
VRK3-216ENST00000599342 BAIAP2Q9UQB8 552 aa8.19□□□□□ -1.1
VRK3-216ENST00000599342 PCDHGB1Q9Y5G3 927 aa8.19□□□□□ -1.1
VRK3-216ENST00000599342 COMMD3-BMI1R4GMX3 469 aa8.19□□□□□ -1.1
VRK3-216ENST00000599342 ARHGAP32A7KAX9 2087 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.18□□□□□ -1.1
VRK3-216ENST00000599342 A6NLC8 198 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 ZNF878C9JN71 531 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 XRCC2O43543 280 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 ENSAO43768 121 aaKnown RBP8.18□□□□□ -1.1
VRK3-216ENST00000599342 GMDSO60547 372 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 IFNGP01579 166 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 RNASE1P07998 156 aaKnown RBP8.18□□□□□ -1.1
VRK3-216ENST00000599342 ATP6V1B2P21281 511 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 FMO3P31513 532 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 PMELP40967 661 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 ENTPD1P49961 510 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 NPY4RP50391 375 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 HMGA2P52926 109 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 PAX2Q02962 417 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 ZNF92Q03936 586 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 MZT1Q08AG7 82 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 CRMP1Q14194 572 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 OR8B8Q15620 311 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 MPPED2Q15777 294 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 TUSC1Q2TAM9 212 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 GLYATL3Q5SZD4 288 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 WDR25Q64LD2 544 aaPredicted RBP8.18□□□□□ -1.1
VRK3-216ENST00000599342 SHISA2Q6UWI4 295 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 LNX2Q8N448 690 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 BOLLQ8N9W6 283 aaKnown RBP8.18□□□□□ -1.1
VRK3-216ENST00000599342 C19orf18Q8NEA5 215 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 OR2T33Q8NG76 320 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 OR10S1Q8NGN2 331 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 OR9Q1Q8NGQ5 310 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 OR6K6Q8NGW6 343 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 OR2AE1Q8NHA4 323 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 ZNF48Q96MX3 618 aaPredicted RBP8.18□□□□□ -1.1
VRK3-216ENST00000599342 KCNJ15Q99712 375 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 TSSK6Q9BXA6 273 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 MUC13Q9H3R2 512 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 REEP1Q9H902 201 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 TRIM36Q9NQ86 728 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 CENPMQ9NSP4 180 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 MRPL15Q9P015 296 aaKnown RBP8.18□□□□□ -1.1
VRK3-216ENST00000599342 KIF17Q9P2E2 1029 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 ERVK-18Q9QC07 812 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 RNF7Q9UBF6 113 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 SAMHD1Q9Y3Z3 626 aaKnown RBP8.18□□□□□ -1.1
VRK3-216ENST00000599342 N6AMT1Q9Y5N5 214 aa8.18□□□□□ -1.1
VRK3-216ENST00000599342 WNK2Q9Y3S1 2297 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 TRAV38-1A0A0B4J264 116 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 KIR2DS1A0A191URI9 304 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 hCG_1807616A0A1W2PRN6 198 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 RIIAD1A6NNX1 92 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 C3orf80F5H4A9 247 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 CLDN34H7C241 214 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 LGALS8O00214 317 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 ZNF593O00488 134 aaPredicted RBP8.17□□□□□ -1.1
VRK3-216ENST00000599342 TBX1O43435 398 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 SOX14O95416 240 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 PLATP00750 562 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 GASTP01350 101 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 GYPBP06028 91 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 SLC2A1P11166 492 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 ZNF3P17036 446 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 EGR1P18146 543 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 HSD11B1P28845 292 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 OTX1P32242 354 aaPredicted RBP8.17□□□□□ -1.1
VRK3-216ENST00000599342 MAGEA2P43356 314 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 SLC15A1P46059 708 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 PRKXP51817 358 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 BLVRAP53004 296 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 GRB2P62993 217 aaKnown RBP8.17□□□□□ -1.1
VRK3-216ENST00000599342 IL13RA1P78552 427 aa8.17□□□□□ -1.1
VRK3-216ENST00000599342 FAM98BQ52LJ0 330 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms