RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 RAB39BQ96DA2 213 aa11.62□□□□□ -0.55
SCAF1-203ENST00000598359 DIRC2Q96SL1 478 aa11.62□□□□□ -0.55
SCAF1-203ENST00000598359 MYCBPQ99417 103 aaPredicted RBP11.62□□□□□ -0.55
SCAF1-203ENST00000598359 COQ7Q99807 217 aa11.62□□□□□ -0.55
SCAF1-203ENST00000598359 HDHD2Q9H0R4 259 aa11.62□□□□□ -0.55
SCAF1-203ENST00000598359 G6PC2Q9NQR9 355 aa11.62□□□□□ -0.55
SCAF1-203ENST00000598359 MRPL22Q9NWU5 206 aaKnown RBP11.62□□□□□ -0.55
SCAF1-203ENST00000598359 CGGBP1Q9UFW8 167 aaPredicted RBP11.62□□□□□ -0.55
SCAF1-203ENST00000598359 CDH10Q9Y6N8 788 aa11.62□□□□□ -0.55
SCAF1-203ENST00000598359 LOC105371242A0A075B767 164 aa11.61□□□□□ -0.55
SCAF1-203ENST00000598359 TRAV20A0A0B4J274 112 aa11.61□□□□□ -0.55
SCAF1-203ENST00000598359 F5H5K5 113 aa11.61□□□□□ -0.55
SCAF1-203ENST00000598359 H0YL77 283 aa11.61□□□□□ -0.55
SCAF1-203ENST00000598359 BHLHE40O14503 412 aa11.61□□□□□ -0.55
SCAF1-203ENST00000598359 MITFO75030 526 aaPredicted RBP11.61□□□□□ -0.55
SCAF1-203ENST00000598359 CCNB2O95067 398 aa11.61□□□□□ -0.55
SCAF1-203ENST00000598359 SOX14O95416 240 aa11.61□□□□□ -0.55
SCAF1-203ENST00000598359 RAC2P15153 192 aa11.61□□□□□ -0.55
SCAF1-203ENST00000598359 ATP6V1B1P15313 513 aa11.61□□□□□ -0.55
SCAF1-203ENST00000598359 PCMT1P22061 227 aa11.61□□□□□ -0.55
SCAF1-203ENST00000598359 ANOS1P23352 680 aa11.61□□□□□ -0.55
SCAF1-203ENST00000598359 GGT2P36268 569 aa11.61□□□□□ -0.55
SCAF1-203ENST00000598359 LCN2P80188 198 aa11.61□□□□□ -0.55
SCAF1-203ENST00000598359 MICAQ29983 383 aa11.61□□□□□ -0.55
SCAF1-203ENST00000598359 ATG16L2Q8NAA4 619 aa11.61□□□□□ -0.55
SCAF1-203ENST00000598359 AQP11Q8NBQ7 271 aa11.61□□□□□ -0.55
SCAF1-203ENST00000598359 OR9Q1Q8NGQ5 310 aa11.61□□□□□ -0.55
SCAF1-203ENST00000598359 APOBEC3DQ96AK3 386 aaPredicted RBP11.61□□□□□ -0.55
SCAF1-203ENST00000598359 OR2V2Q96R30 315 aa11.61□□□□□ -0.55
SCAF1-203ENST00000598359 CDADC1Q9BWV3 514 aa11.61□□□□□ -0.55
SCAF1-203ENST00000598359 OCEL1Q9H607 264 aa11.61□□□□□ -0.55
SCAF1-203ENST00000598359 KRT84Q9NSB2 600 aa11.61□□□□□ -0.55
SCAF1-203ENST00000598359 TMEM106BQ9NUM4 274 aa11.61□□□□□ -0.55
SCAF1-203ENST00000598359 CYB5R1Q9UHQ9 305 aa11.61□□□□□ -0.55
SCAF1-203ENST00000598359 ATPIF1Q9UII2 106 aa11.61□□□□□ -0.55
SCAF1-203ENST00000598359 TANC2Q9HCD6 1990 aa11.61□□□□□ -0.55
SCAF1-203ENST00000598359 IDH3BO43837 385 aa11.6□□□□□ -0.55
SCAF1-203ENST00000598359 ZNF205O95201 554 aa11.6□□□□□ -0.55
SCAF1-203ENST00000598359 PNPP00491 289 aa11.6□□□□□ -0.55
SCAF1-203ENST00000598359 IGHV2-70P01814 119 aa11.6□□□□□ -0.55
SCAF1-203ENST00000598359 GYPBP06028 91 aa11.6□□□□□ -0.55
SCAF1-203ENST00000598359 CCDC159P0C7I6 412 aa11.6□□□□□ -0.55
SCAF1-203ENST00000598359 ACSM4P0C7M7 580 aa11.6□□□□□ -0.55
SCAF1-203ENST00000598359 ADRA2CP18825 462 aa11.6□□□□□ -0.55
SCAF1-203ENST00000598359 TUBG1P23258 451 aa11.6□□□□□ -0.55
SCAF1-203ENST00000598359 TNFSF4P23510 183 aa11.6□□□□□ -0.55
SCAF1-203ENST00000598359 CRHBPP24387 322 aa11.6□□□□□ -0.55
SCAF1-203ENST00000598359 RGS6P49758 472 aa11.6□□□□□ -0.55
SCAF1-203ENST00000598359 CXCR4P61073 352 aa11.6□□□□□ -0.55
SCAF1-203ENST00000598359 C6orf141Q5SZD1 244 aa11.6□□□□□ -0.55
SCAF1-203ENST00000598359 ZNF362Q5T0B9 420 aaPredicted RBP11.6□□□□□ -0.55
SCAF1-203ENST00000598359 LAIR2Q6ISS4 152 aa11.6□□□□□ -0.55
SCAF1-203ENST00000598359 ZNF773Q6PK81 442 aa11.6□□□□□ -0.55
SCAF1-203ENST00000598359 FBXW12Q6X9E4 464 aa11.6□□□□□ -0.55
SCAF1-203ENST00000598359 PARP8Q8N3A8 854 aa11.6□□□□□ -0.55
SCAF1-203ENST00000598359 SLC37A3Q8NCC5 494 aa11.6□□□□□ -0.55
SCAF1-203ENST00000598359 PROKR2Q8NFJ6 384 aa11.6□□□□□ -0.55
SCAF1-203ENST00000598359 OR10G2Q8NGC3 310 aa11.6□□□□□ -0.55
SCAF1-203ENST00000598359 OR52L1Q8NGH7 329 aa11.6□□□□□ -0.55
SCAF1-203ENST00000598359 OR10S1Q8NGN2 331 aa11.6□□□□□ -0.55
SCAF1-203ENST00000598359 OR2AJ1Q8NGZ0 328 aa11.6□□□□□ -0.55
SCAF1-203ENST00000598359 OR4Q3Q8NH05 313 aa11.6□□□□□ -0.55
SCAF1-203ENST00000598359 ZNF420Q8TAQ5 688 aaPredicted RBP11.6□□□□□ -0.55
SCAF1-203ENST00000598359 MAP6Q96JE9 813 aa11.6□□□□□ -0.55
SCAF1-203ENST00000598359 COG8Q96MW5 612 aa11.6□□□□□ -0.55
SCAF1-203ENST00000598359 DDOQ99489 341 aa11.6□□□□□ -0.55
SCAF1-203ENST00000598359 TSSK6Q9BXA6 273 aa11.6□□□□□ -0.55
SCAF1-203ENST00000598359 TMPRSS13Q9BYE2 586 aa11.6□□□□□ -0.55
SCAF1-203ENST00000598359 PNRC2Q9NPJ4 139 aaKnown RBP11.6□□□□□ -0.55
SCAF1-203ENST00000598359 TUBG2Q9NRH3 451 aa11.6□□□□□ -0.55
SCAF1-203ENST00000598359 TBC1D23Q9NUY8 699 aa11.6□□□□□ -0.55
SCAF1-203ENST00000598359 KIF17Q9P2E2 1029 aa11.6□□□□□ -0.55
SCAF1-203ENST00000598359 METRNQ9UJH8 293 aa11.6□□□□□ -0.55
SCAF1-203ENST00000598359 PPP1R3CQ9UQK1 317 aa11.6□□□□□ -0.55
SCAF1-203ENST00000598359 NPTNQ9Y639 398 aa11.6□□□□□ -0.55
SCAF1-203ENST00000598359 C5orf63A6NC05 138 aa11.59□□□□□ -0.55
SCAF1-203ENST00000598359 MLNRO43193 412 aa11.59□□□□□ -0.55
SCAF1-203ENST00000598359 TCF21O43680 179 aa11.59□□□□□ -0.55
SCAF1-203ENST00000598359 SELEP16581 610 aa11.59□□□□□ -0.55
SCAF1-203ENST00000598359 JUNBP17275 347 aaPredicted RBP11.59□□□□□ -0.55
SCAF1-203ENST00000598359 ZFP36P26651 326 aaKnown RBP11.59□□□□□ -0.55
SCAF1-203ENST00000598359 SEC61A1P61619 476 aaKnown RBP11.59□□□□□ -0.55
SCAF1-203ENST00000598359 SLC3A1Q07837 685 aa11.59□□□□□ -0.55
SCAF1-203ENST00000598359 CRMP1Q14194 572 aa11.59□□□□□ -0.55
SCAF1-203ENST00000598359 ZMYND11Q15326 602 aa11.59□□□□□ -0.55
SCAF1-203ENST00000598359 CNPY1Q3B7I2 92 aa11.59□□□□□ -0.55
SCAF1-203ENST00000598359 KRTAP27-1Q3LI81 207 aa11.59□□□□□ -0.55
SCAF1-203ENST00000598359 RASSF6Q6ZTQ3 369 aa11.59□□□□□ -0.55
SCAF1-203ENST00000598359 PEG10Q86TG7 708 aaKnown RBP11.59□□□□□ -0.55
SCAF1-203ENST00000598359 RFLNBQ8N5W9 214 aa11.59□□□□□ -0.55
SCAF1-203ENST00000598359 ZNF283Q8N7M2 679 aa11.59□□□□□ -0.55
SCAF1-203ENST00000598359 OR8G5Q8NG78 346 aa11.59□□□□□ -0.55
SCAF1-203ENST00000598359 OR5L1Q8NGL2 311 aa11.59□□□□□ -0.55
SCAF1-203ENST00000598359 DGCR14Q96DF8 476 aaKnown RBP11.59□□□□□ -0.55
SCAF1-203ENST00000598359 HRASLS5Q96KN8 279 aa11.59□□□□□ -0.55
SCAF1-203ENST00000598359 SIGLEC11Q96RL6 698 aa11.59□□□□□ -0.55
SCAF1-203ENST00000598359 ATF6BQ99941 703 aa11.59□□□□□ -0.55
SCAF1-203ENST00000598359 APOL4Q9BPW4 351 aa11.59□□□□□ -0.55
SCAF1-203ENST00000598359 IL20Q9NYY1 176 aa11.59□□□□□ -0.55
SCAF1-203ENST00000598359 IL19Q9UHD0 177 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms