RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 ZNF829Q3KNS6 432 aaPredicted RBP19.33■□□□□ 0.69
SNRNP70-204ENST00000595231 GLYATL3Q5SZD4 288 aa19.33■□□□□ 0.69
SNRNP70-204ENST00000595231 OR2G6Q5TZ20 316 aa19.33■□□□□ 0.69
SNRNP70-204ENST00000595231 FBXW12Q6X9E4 464 aa19.33■□□□□ 0.69
SNRNP70-204ENST00000595231 FAM220AQ7Z4H9 259 aa19.33■□□□□ 0.69
SNRNP70-204ENST00000595231 DTX2Q86UW9 622 aa19.33■□□□□ 0.69
SNRNP70-204ENST00000595231 ZNF485Q8NCK3 441 aa19.33■□□□□ 0.69
SNRNP70-204ENST00000595231 OR8B12Q8NGG6 310 aa19.33■□□□□ 0.69
SNRNP70-204ENST00000595231 OR2AE1Q8NHA4 323 aa19.33■□□□□ 0.69
SNRNP70-204ENST00000595231 SYNPRQ8TBG9 265 aa19.33■□□□□ 0.69
SNRNP70-204ENST00000595231 IGFBPL1Q8WX77 278 aa19.33■□□□□ 0.69
SNRNP70-204ENST00000595231 SGK3Q96BR1 496 aa19.33■□□□□ 0.69
SNRNP70-204ENST00000595231 MRPL48Q96GC5 212 aaKnown RBP19.33■□□□□ 0.69
SNRNP70-204ENST00000595231 MYCBPQ99417 103 aaPredicted RBP19.33■□□□□ 0.69
SNRNP70-204ENST00000595231 CDCA4Q9BXL8 241 aa19.33■□□□□ 0.69
SNRNP70-204ENST00000595231 SP140LQ9H930 580 aa19.33■□□□□ 0.69
SNRNP70-204ENST00000595231 MYEF2Q9P2K5 600 aaKnown RBP19.33■□□□□ 0.69
SNRNP70-204ENST00000595231 DUSP13Q9UII6 198 aa19.33■□□□□ 0.69
SNRNP70-204ENST00000595231 H3BSA7 217 aa19.33■□□□□ 0.68
SNRNP70-204ENST00000595231 PSMB10P40306 273 aa19.33■□□□□ 0.68
SNRNP70-204ENST00000595231 ZNF92Q03936 586 aa19.33■□□□□ 0.68
SNRNP70-204ENST00000595231 PSG7Q13046 419 aa19.33■□□□□ 0.68
SNRNP70-204ENST00000595231 EFNB3Q15768 340 aa19.33■□□□□ 0.68
SNRNP70-204ENST00000595231 RNLSQ5VYX0 342 aa19.33■□□□□ 0.68
SNRNP70-204ENST00000595231 C20orf204Q6ZNR8 217 aa19.33■□□□□ 0.68
SNRNP70-204ENST00000595231 FBXL14Q8N1E6 418 aa19.33■□□□□ 0.68
SNRNP70-204ENST00000595231 SPSB4Q96A44 273 aa19.33■□□□□ 0.68
SNRNP70-204ENST00000595231 PGAM5Q96HS1 289 aa19.33■□□□□ 0.68
SNRNP70-204ENST00000595231 SYT3Q9BQG1 590 aa19.33■□□□□ 0.68
SNRNP70-204ENST00000595231 PBOV1Q9GZY1 135 aa19.33■□□□□ 0.68
SNRNP70-204ENST00000595231 PLK3Q9H4B4 646 aa19.33■□□□□ 0.68
SNRNP70-204ENST00000595231 FAIMQ9NVQ4 179 aa19.33■□□□□ 0.68
SNRNP70-204ENST00000595231 NUFIP1Q9UHK0 495 aaKnown RBP19.33■□□□□ 0.68
SNRNP70-204ENST00000595231 LOC110117498-PIK3R3F6TDL0 507 aa19.32■□□□□ 0.68
SNRNP70-204ENST00000595231 TBX1O43435 398 aa19.32■□□□□ 0.68
SNRNP70-204ENST00000595231 IGHV3-13P01766 116 aa19.32■□□□□ 0.68
SNRNP70-204ENST00000595231 HTR1AP08908 422 aa19.32■□□□□ 0.68
SNRNP70-204ENST00000595231 EVX1P49640 407 aa19.32■□□□□ 0.68
SNRNP70-204ENST00000595231 MALLQ13021 153 aa19.32■□□□□ 0.68
SNRNP70-204ENST00000595231 C11orf71Q6IPW1 123 aa19.32■□□□□ 0.68
SNRNP70-204ENST00000595231 SPRYD4Q8WW59 207 aaPredicted RBP19.32■□□□□ 0.68
SNRNP70-204ENST00000595231 HAVCR1Q96D42 359 aa19.32■□□□□ 0.68
SNRNP70-204ENST00000595231 CMBLQ96DG6 245 aa19.32■□□□□ 0.68
SNRNP70-204ENST00000595231 REPIN1Q9BWE0 567 aaKnown RBP19.32■□□□□ 0.68
SNRNP70-204ENST00000595231 YTHDF1Q9BYJ9 559 aaKnown RBP19.32■□□□□ 0.68
SNRNP70-204ENST00000595231 CBLN4Q9NTU7 201 aa19.32■□□□□ 0.68
SNRNP70-204ENST00000595231 CHCHD3Q9NX63 227 aaKnown RBP19.32■□□□□ 0.68
SNRNP70-204ENST00000595231 OR52A1Q9UKL2 312 aa19.32■□□□□ 0.68
SNRNP70-204ENST00000595231 BLOC1S6Q9UL45 172 aa19.32■□□□□ 0.68
SNRNP70-204ENST00000595231 LAMP3Q9UQV4 416 aa19.32■□□□□ 0.68
SNRNP70-204ENST00000595231 SNX5Q9Y5X3 404 aa19.32■□□□□ 0.68
SNRNP70-204ENST00000595231 ARFGEF3Q5TH69 2177 aa19.31■□□□□ 0.68
SNRNP70-204ENST00000595231 E9PI62 339 aa19.31■□□□□ 0.68
SNRNP70-204ENST00000595231 ATE1O95260 518 aa19.31■□□□□ 0.68
SNRNP70-204ENST00000595231 RAC2P15153 192 aa19.31■□□□□ 0.68
SNRNP70-204ENST00000595231 GCH1P30793 250 aa19.31■□□□□ 0.68
SNRNP70-204ENST00000595231 KLF3P57682 345 aaPredicted RBP19.31■□□□□ 0.68
SNRNP70-204ENST00000595231 NANOS3P60323 173 aaKnown RBP19.31■□□□□ 0.68
SNRNP70-204ENST00000595231 IRF3Q14653 427 aa19.31■□□□□ 0.68
SNRNP70-204ENST00000595231 ALKBH6Q3KRA9 238 aa19.31■□□□□ 0.68
SNRNP70-204ENST00000595231 AGAP6Q5VW22 663 aa19.31■□□□□ 0.68
SNRNP70-204ENST00000595231 FDX2Q6P4F2 183 aa19.31■□□□□ 0.68
SNRNP70-204ENST00000595231 CATSPERDQ86XM0 798 aa19.31■□□□□ 0.68
SNRNP70-204ENST00000595231 PRSS35Q8N3Z0 413 aa19.31■□□□□ 0.68
SNRNP70-204ENST00000595231 KLHL36Q8N4N3 616 aa19.31■□□□□ 0.68
SNRNP70-204ENST00000595231 NANOGP1Q8N7R0 232 aa19.31■□□□□ 0.68
SNRNP70-204ENST00000595231 OR52N1Q8NH53 320 aa19.31■□□□□ 0.68
SNRNP70-204ENST00000595231 TRAF4Q9BUZ4 470 aaPredicted RBP19.31■□□□□ 0.68
SNRNP70-204ENST00000595231 OR10A2Q9H208 303 aa19.31■□□□□ 0.68
SNRNP70-204ENST00000595231 POLQO75417 2590 aa19.31■□□□□ 0.68
SNRNP70-204ENST00000595231 B9A039 149 aa19.3■□□□□ 0.68
SNRNP70-204ENST00000595231 XRCC2O43543 280 aa19.3■□□□□ 0.68
SNRNP70-204ENST00000595231 RGS10O43665 173 aa19.3■□□□□ 0.68
SNRNP70-204ENST00000595231 TTRP02766 147 aa19.3■□□□□ 0.68
SNRNP70-204ENST00000595231 MT-ND5P03915 603 aa19.3■□□□□ 0.68
SNRNP70-204ENST00000595231 PRSS12P56730 875 aa19.3■□□□□ 0.68
SNRNP70-204ENST00000595231 TMPRSS11AQ6ZMR5 421 aa19.3■□□□□ 0.68
SNRNP70-204ENST00000595231 ELMOD2Q8IZ81 293 aa19.3■□□□□ 0.68
SNRNP70-204ENST00000595231 MOB1AQ9H8S9 216 aa19.3■□□□□ 0.68
SNRNP70-204ENST00000595231 SLC22A13Q9Y226 551 aa19.3■□□□□ 0.68
SNRNP70-204ENST00000595231 IGLV3-1P01715 115 aa19.3■□□□□ 0.68
SNRNP70-204ENST00000595231 MT-ND2P03891 347 aa19.3■□□□□ 0.68
SNRNP70-204ENST00000595231 DOC2BQ14184 412 aa19.3■□□□□ 0.68
SNRNP70-204ENST00000595231 WDR38Q5JTN6 314 aa19.3■□□□□ 0.68
SNRNP70-204ENST00000595231 PRSS48Q7RTY5 328 aa19.3■□□□□ 0.68
SNRNP70-204ENST00000595231 OR2G2Q8NGZ5 317 aa19.3■□□□□ 0.68
SNRNP70-204ENST00000595231 GATAD2BQ8WXI9 593 aa19.3■□□□□ 0.68
SNRNP70-204ENST00000595231 REEP6Q96HR9 211 aa19.3■□□□□ 0.68
SNRNP70-204ENST00000595231 LYZL4Q96KX0 146 aa19.3■□□□□ 0.68
SNRNP70-204ENST00000595231 FRRS1LQ9P0K9 344 aa19.3■□□□□ 0.68
SNRNP70-204ENST00000595231 GTF2A1LQ9UNN4 478 aa19.3■□□□□ 0.68
SNRNP70-204ENST00000595231 LRCH1Q9Y2L9 728 aa19.3■□□□□ 0.68
SNRNP70-204ENST00000595231 A0A0U1RQV5 110 aa19.29■□□□□ 0.68
SNRNP70-204ENST00000595231 LALBAP00709 142 aa19.29■□□□□ 0.68
SNRNP70-204ENST00000595231 KITLGP21583 273 aa19.29■□□□□ 0.68
SNRNP70-204ENST00000595231 EEF1B2P24534 225 aaKnown RBP19.29■□□□□ 0.68
SNRNP70-204ENST00000595231 GTF2A1P52655 376 aaPredicted RBP19.29■□□□□ 0.68
SNRNP70-204ENST00000595231 GABARAPL2P60520 117 aa19.29■□□□□ 0.68
SNRNP70-204ENST00000595231 TIGD6Q17RP2 521 aa19.29■□□□□ 0.68
SNRNP70-204ENST00000595231 BCL2L15Q5TBC7 163 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms