RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 IQCMA0A1B0GVH7 501 aa13.23□□□□□ -0.29
FOXA3-202ENST00000594297 A0A1W2PQL4 384 aaPredicted RBP13.23□□□□□ -0.29
FOXA3-202ENST00000594297 J3QRE1 110 aa13.23□□□□□ -0.29
FOXA3-202ENST00000594297 SGCEO43556 437 aa13.23□□□□□ -0.29
FOXA3-202ENST00000594297 SULT1C4O75897 302 aa13.23□□□□□ -0.29
FOXA3-202ENST00000594297 MT-ND5P03915 603 aa13.23□□□□□ -0.29
FOXA3-202ENST00000594297 H2BFMP0C1H6 154 aa13.23□□□□□ -0.29
FOXA3-202ENST00000594297 APEX1P27695 318 aaKnown RBP13.23□□□□□ -0.29
FOXA3-202ENST00000594297 COMPP49747 757 aaPredicted RBP13.23□□□□□ -0.29
FOXA3-202ENST00000594297 TUBA4AP68366 448 aa13.23□□□□□ -0.29
FOXA3-202ENST00000594297 DBPQ10586 325 aaPredicted RBP13.23□□□□□ -0.29
FOXA3-202ENST00000594297 GSG1Q2KHT4 349 aa13.23□□□□□ -0.29
FOXA3-202ENST00000594297 DEGS2Q6QHC5 323 aa13.23□□□□□ -0.29
FOXA3-202ENST00000594297 LYPD4Q6UWN0 246 aa13.23□□□□□ -0.29
FOXA3-202ENST00000594297 LINC00346Q8IVM7 164 aa13.23□□□□□ -0.29
FOXA3-202ENST00000594297 ZFAND2BQ8WV99 257 aa13.23□□□□□ -0.29
FOXA3-202ENST00000594297 ABHD6Q9BV23 337 aa13.23□□□□□ -0.29
FOXA3-202ENST00000594297 ALG8Q9BVK2 526 aa13.23□□□□□ -0.29
FOXA3-202ENST00000594297 HDHD2Q9H0R4 259 aa13.23□□□□□ -0.29
FOXA3-202ENST00000594297 HEATR1Q9H583 2144 aaKnown RBP13.23□□□□□ -0.29
FOXA3-202ENST00000594297 NIPAL2Q9H841 368 aa13.23□□□□□ -0.29
FOXA3-202ENST00000594297 SLC17A5Q9NRA2 495 aa13.23□□□□□ -0.29
FOXA3-202ENST00000594297 CENPMQ9NSP4 180 aa13.23□□□□□ -0.29
FOXA3-202ENST00000594297 PLEK2Q9NYT0 353 aa13.23□□□□□ -0.29
FOXA3-202ENST00000594297 CAB39Q9Y376 341 aaPredicted RBP13.23□□□□□ -0.29
FOXA3-202ENST00000594297 LHFPL6Q9Y693 200 aa13.23□□□□□ -0.29
FOXA3-202ENST00000594297 ARPC4-TTLL3A0A0A6YYG9 625 aa13.22□□□□□ -0.29
FOXA3-202ENST00000594297 TMEM129A0AVI4 362 aa13.22□□□□□ -0.29
FOXA3-202ENST00000594297 ZNF878C9JN71 531 aa13.22□□□□□ -0.29
FOXA3-202ENST00000594297 MT-ND2P03891 347 aa13.22□□□□□ -0.29
FOXA3-202ENST00000594297 HSD11B1P28845 292 aa13.22□□□□□ -0.29
FOXA3-202ENST00000594297 C21orf33P30042 268 aaPredicted RBP13.22□□□□□ -0.29
FOXA3-202ENST00000594297 GBX2P52951 348 aaPredicted RBP13.22□□□□□ -0.29
FOXA3-202ENST00000594297 HCCSP53701 268 aa13.22□□□□□ -0.29
FOXA3-202ENST00000594297 CDH15P55291 814 aa13.22□□□□□ -0.29
FOXA3-202ENST00000594297 RAB1AP62820 205 aa13.22□□□□□ -0.29
FOXA3-202ENST00000594297 GRB2P62993 217 aaKnown RBP13.22□□□□□ -0.29
FOXA3-202ENST00000594297 ENDOGQ14249 297 aaKnown RBP13.22□□□□□ -0.29
FOXA3-202ENST00000594297 HIKESHIQ53FT3 197 aa13.22□□□□□ -0.29
FOXA3-202ENST00000594297 TMEM154Q6P9G4 183 aa13.22□□□□□ -0.29
FOXA3-202ENST00000594297 CORO6Q6QEF8 472 aa13.22□□□□□ -0.29
FOXA3-202ENST00000594297 ZNF679Q8IYX0 411 aa13.22□□□□□ -0.29
FOXA3-202ENST00000594297 SYS1Q8N2H4 156 aa13.22□□□□□ -0.29
FOXA3-202ENST00000594297 C3orf56Q8N813 242 aa13.22□□□□□ -0.29
FOXA3-202ENST00000594297 YIPF7Q8N8F6 280 aa13.22□□□□□ -0.29
FOXA3-202ENST00000594297 LINC01356Q8N9X3 169 aa13.22□□□□□ -0.29
FOXA3-202ENST00000594297 OR52N1Q8NH53 320 aa13.22□□□□□ -0.29
FOXA3-202ENST00000594297 SPTSSAQ969W0 71 aa13.22□□□□□ -0.29
FOXA3-202ENST00000594297 SLAMF6Q96DU3 332 aa13.22□□□□□ -0.29
FOXA3-202ENST00000594297 MRPS26Q9BYN8 205 aaKnown RBP13.22□□□□□ -0.29
FOXA3-202ENST00000594297 SP140LQ9H930 580 aa13.22□□□□□ -0.29
FOXA3-202ENST00000594297 PAK1IP1Q9NWT1 392 aaPredicted RBP13.22□□□□□ -0.29
FOXA3-202ENST00000594297 METRNQ9UJH8 293 aa13.22□□□□□ -0.29
FOXA3-202ENST00000594297 METTL15A6NJ78 407 aa13.21□□□□□ -0.29
FOXA3-202ENST00000594297 J3QLW9 94 aa13.21□□□□□ -0.29
FOXA3-202ENST00000594297 LILRA1O75019 489 aa13.21□□□□□ -0.29
FOXA3-202ENST00000594297 RGS9O75916 674 aaPredicted RBP13.21□□□□□ -0.29
FOXA3-202ENST00000594297 CLPTM1O96005 669 aa13.21□□□□□ -0.29
FOXA3-202ENST00000594297 HLA-HP01893 362 aa13.21□□□□□ -0.29
FOXA3-202ENST00000594297 SCG5P05408 212 aa13.21□□□□□ -0.29
FOXA3-202ENST00000594297 ATP6V1B1P15313 513 aa13.21□□□□□ -0.29
FOXA3-202ENST00000594297 ZNF19P17023 458 aa13.21□□□□□ -0.29
FOXA3-202ENST00000594297 ZNF32P17041 273 aa13.21□□□□□ -0.29
FOXA3-202ENST00000594297 RPS27P42677 84 aaKnown RBP13.21□□□□□ -0.29
FOXA3-202ENST00000594297 ETV1P50549 477 aa13.21□□□□□ -0.29
FOXA3-202ENST00000594297 RIDAP52758 137 aaKnown RBP13.21□□□□□ -0.29
FOXA3-202ENST00000594297 ROM1Q03395 351 aa13.21□□□□□ -0.29
FOXA3-202ENST00000594297 PIGFQ07326 219 aa13.21□□□□□ -0.29
FOXA3-202ENST00000594297 ELFN2Q5R3F8 820 aa13.21□□□□□ -0.29
FOXA3-202ENST00000594297 SPARTQ8N0X7 666 aa13.21□□□□□ -0.29
FOXA3-202ENST00000594297 NANOGP1Q8N7R0 232 aa13.21□□□□□ -0.29
FOXA3-202ENST00000594297 OR1J2Q8NGS2 313 aa13.21□□□□□ -0.29
FOXA3-202ENST00000594297 RNF133Q8WVZ7 376 aa13.21□□□□□ -0.29
FOXA3-202ENST00000594297 RORBQ92753 470 aa13.21□□□□□ -0.29
FOXA3-202ENST00000594297 ATF6BQ99941 703 aa13.21□□□□□ -0.29
FOXA3-202ENST00000594297 OR2H1Q9GZK4 316 aa13.21□□□□□ -0.29
FOXA3-202ENST00000594297 METTL17Q9H7H0 456 aaPredicted RBP13.21□□□□□ -0.29
FOXA3-202ENST00000594297 GNG8Q9UK08 70 aa13.21□□□□□ -0.29
FOXA3-202ENST00000594297 A0A0A6YYJ9 748 aa13.2□□□□□ -0.3
FOXA3-202ENST00000594297 OR6C6A6NF89 314 aa13.2□□□□□ -0.3
FOXA3-202ENST00000594297 RER1O15258 196 aa13.2□□□□□ -0.3
FOXA3-202ENST00000594297 DOK2O60496 412 aa13.2□□□□□ -0.3
FOXA3-202ENST00000594297 LIMS3P0CW19 117 aa13.2□□□□□ -0.3
FOXA3-202ENST00000594297 LIMS4P0CW20 117 aa13.2□□□□□ -0.3
FOXA3-202ENST00000594297 COX5BP10606 129 aa13.2□□□□□ -0.3
FOXA3-202ENST00000594297 GIFP27352 417 aa13.2□□□□□ -0.3
FOXA3-202ENST00000594297 APLNRP35414 380 aa13.2□□□□□ -0.3
FOXA3-202ENST00000594297 WNT4P56705 351 aa13.2□□□□□ -0.3
FOXA3-202ENST00000594297 TAS2R43P59537 309 aa13.2□□□□□ -0.3
FOXA3-202ENST00000594297 HIST1H3AP68431 136 aa13.2□□□□□ -0.3
FOXA3-202ENST00000594297 ZNF85Q03923 595 aa13.2□□□□□ -0.3
FOXA3-202ENST00000594297 SPHARQ15513 63 aa13.2□□□□□ -0.3
FOXA3-202ENST00000594297 MED22Q15528 200 aa13.2□□□□□ -0.3
FOXA3-202ENST00000594297 TBCEQ15813 527 aaPredicted RBP13.2□□□□□ -0.3
FOXA3-202ENST00000594297 CDONQ4KMG0 1287 aa13.2□□□□□ -0.3
FOXA3-202ENST00000594297 PABPC1L2AQ5JQF8 200 aa13.2□□□□□ -0.3
FOXA3-202ENST00000594297 HIST2H3PS2Q5TEC6 136 aa13.2□□□□□ -0.3
FOXA3-202ENST00000594297 ARL9Q6T311 187 aa13.2□□□□□ -0.3
FOXA3-202ENST00000594297 HIST2H3AQ71DI3 136 aa13.2□□□□□ -0.3
FOXA3-202ENST00000594297 OR1F12Q8NHA8 337 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms