RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 RNF133Q8WVZ7 376 aa14.68□□□□□ -0.06
LIG1-206ENST00000594067 SLAMF6Q96DU3 332 aa14.68□□□□□ -0.06
LIG1-206ENST00000594067 A0A1B0GX78 115 aa14.67□□□□□ -0.06
LIG1-206ENST00000594067 C9orf170A2RU37 121 aa14.67□□□□□ -0.06
LIG1-206ENST00000594067 SYT7O43581 403 aa14.67□□□□□ -0.06
LIG1-206ENST00000594067 PRKXP51817 358 aa14.67□□□□□ -0.06
LIG1-206ENST00000594067 HNRNPKP61978 463 aaKnown RBP eCLIP14.67□□□□□ -0.06
LIG1-206ENST00000594067 SCRN3Q0VDG4 424 aa14.67□□□□□ -0.06
LIG1-206ENST00000594067 ZP4Q12836 540 aa14.67□□□□□ -0.06
LIG1-206ENST00000594067 ARMC10Q8N2F6 343 aa14.67□□□□□ -0.06
LIG1-206ENST00000594067 OR10H5Q8NGA6 315 aa14.67□□□□□ -0.06
LIG1-206ENST00000594067 OR13C9Q8NGT0 318 aa14.67□□□□□ -0.06
LIG1-206ENST00000594067 THAP6Q8TBB0 222 aa14.67□□□□□ -0.06
LIG1-206ENST00000594067 SLC2A8Q9NY64 477 aa14.67□□□□□ -0.06
LIG1-206ENST00000594067 ANKUB1A6NFN9 424 aa14.67□□□□□ -0.06
LIG1-206ENST00000594067 ZNF217O75362 1048 aa14.67□□□□□ -0.06
LIG1-206ENST00000594067 ACTL6AO96019 429 aa14.67□□□□□ -0.06
LIG1-206ENST00000594067 VSIG8P0DPA2 414 aa14.67□□□□□ -0.06
LIG1-206ENST00000594067 HRH1P35367 487 aa14.67□□□□□ -0.06
LIG1-206ENST00000594067 AKR1D1P51857 326 aa14.67□□□□□ -0.06
LIG1-206ENST00000594067 BIDP55957 195 aa14.67□□□□□ -0.06
LIG1-206ENST00000594067 SMAD2Q15796 467 aaKnown RBP14.67□□□□□ -0.06
LIG1-206ENST00000594067 PHF19Q5T6S3 580 aa14.67□□□□□ -0.06
LIG1-206ENST00000594067 RAB12Q6IQ22 244 aa14.67□□□□□ -0.06
LIG1-206ENST00000594067 HAGHLQ6PII5 290 aaPredicted RBP14.67□□□□□ -0.06
LIG1-206ENST00000594067 RNF144BQ7Z419 303 aa14.67□□□□□ -0.06
LIG1-206ENST00000594067 D2HGDHQ8N465 521 aa14.67□□□□□ -0.06
LIG1-206ENST00000594067 ADAD2Q8NCV1 583 aaKnown RBP14.67□□□□□ -0.06
LIG1-206ENST00000594067 OR1M1Q8NGA1 313 aa14.67□□□□□ -0.06
LIG1-206ENST00000594067 MFSD8Q8NHS3 518 aa14.67□□□□□ -0.06
LIG1-206ENST00000594067 PBOV1Q9GZY1 135 aa14.67□□□□□ -0.06
LIG1-206ENST00000594067 CHST11Q9NPF2 352 aa14.67□□□□□ -0.06
LIG1-206ENST00000594067 MBD2Q9UBB5 411 aa14.67□□□□□ -0.06
LIG1-206ENST00000594067 OR2AT4A6NND4 320 aa14.66□□□□□ -0.06
LIG1-206ENST00000594067 STK17BO94768 372 aa14.66□□□□□ -0.06
LIG1-206ENST00000594067 MMP16P51512 607 aa14.66□□□□□ -0.06
LIG1-206ENST00000594067 IL13RA1P78552 427 aa14.66□□□□□ -0.06
LIG1-206ENST00000594067 FOXF1Q12946 379 aa14.66□□□□□ -0.06
LIG1-206ENST00000594067 DEGS2Q6QHC5 323 aa14.66□□□□□ -0.06
LIG1-206ENST00000594067 KLHL24Q6TFL4 600 aa14.66□□□□□ -0.06
LIG1-206ENST00000594067 KCTD9Q7L273 389 aa14.66□□□□□ -0.06
LIG1-206ENST00000594067 CBLN2Q8IUK8 224 aa14.66□□□□□ -0.06
LIG1-206ENST00000594067 INO80EQ8NBZ0 244 aaPredicted RBP14.66□□□□□ -0.06
LIG1-206ENST00000594067 SPACA5Q96QH8 159 aa14.66□□□□□ -0.06
LIG1-206ENST00000594067 SELENOIQ9C0D9 397 aa14.66□□□□□ -0.06
LIG1-206ENST00000594067 ESRP2Q9H6T0 727 aaKnown RBP14.66□□□□□ -0.06
LIG1-206ENST00000594067 OPN1LWP04000 364 aa14.66□□□□□ -0.06
LIG1-206ENST00000594067 AKR1C4P17516 323 aa14.66□□□□□ -0.06
LIG1-206ENST00000594067 VAMP1P23763 118 aa14.66□□□□□ -0.06
LIG1-206ENST00000594067 HSD11B1P28845 292 aa14.66□□□□□ -0.06
LIG1-206ENST00000594067 DCDP81605 110 aaKnown RBP14.66□□□□□ -0.06
LIG1-206ENST00000594067 SRSF3P84103 164 aaKnown RBP14.66□□□□□ -0.06
LIG1-206ENST00000594067 C10orf91Q5T1B1 145 aa14.66□□□□□ -0.06
LIG1-206ENST00000594067 LMAN1LQ9HAT1 526 aa14.66□□□□□ -0.06
LIG1-206ENST00000594067 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.65□□□□□ -0.06
LIG1-206ENST00000594067 ERCC1P07992 297 aaPredicted RBP14.65□□□□□ -0.06
LIG1-206ENST00000594067 CSNK1EP49674 416 aaKnown RBP14.65□□□□□ -0.06
LIG1-206ENST00000594067 QRFPP83859 136 aa14.65□□□□□ -0.06
LIG1-206ENST00000594067 TMEM71Q6P5X7 295 aa14.65□□□□□ -0.06
LIG1-206ENST00000594067 PLXDC1Q8IUK5 500 aa14.65□□□□□ -0.06
LIG1-206ENST00000594067 GTPBP8Q8N3Z3 284 aaPredicted RBP14.65□□□□□ -0.06
LIG1-206ENST00000594067 SLC22A24Q8N4F4 322 aa14.65□□□□□ -0.06
LIG1-206ENST00000594067 OR10S1Q8NGN2 331 aa14.65□□□□□ -0.06
LIG1-206ENST00000594067 ST8SIA1Q92185 356 aa14.65□□□□□ -0.06
LIG1-206ENST00000594067 PIK3IP1Q96FE7 263 aa14.65□□□□□ -0.06
LIG1-206ENST00000594067 ZNF768Q9H5H4 540 aaKnown RBP14.65□□□□□ -0.06
LIG1-206ENST00000594067 FGF21Q9NSA1 209 aa14.65□□□□□ -0.06
LIG1-206ENST00000594067 ZNF629Q9UEG4 869 aaPredicted RBP14.65□□□□□ -0.06
LIG1-206ENST00000594067 SLC5A6Q9Y289 635 aa14.65□□□□□ -0.06
LIG1-206ENST00000594067 EEF1E1-BLOC1S5C9J1V9 151 aa14.65□□□□□ -0.06
LIG1-206ENST00000594067 PMP2P02689 132 aa14.65□□□□□ -0.06
LIG1-206ENST00000594067 C17orf67Q0P5P2 114 aa14.65□□□□□ -0.06
LIG1-206ENST00000594067 MICBQ29980 383 aa14.65□□□□□ -0.06
LIG1-206ENST00000594067 AWAT2Q6E213 333 aa14.65□□□□□ -0.06
LIG1-206ENST00000594067 DHRS7BQ6IAN0 325 aaPredicted RBP14.65□□□□□ -0.06
LIG1-206ENST00000594067 RAB11FIP2Q7L804 512 aa14.65□□□□□ -0.06
LIG1-206ENST00000594067 MISPQ8IVT2 679 aa14.65□□□□□ -0.06
LIG1-206ENST00000594067 PHB2Q99623 299 aa14.65□□□□□ -0.06
LIG1-206ENST00000594067 TLNRD1Q9H1K6 362 aa14.65□□□□□ -0.06
LIG1-206ENST00000594067 SLC22A11Q9NSA0 550 aa14.65□□□□□ -0.06
LIG1-206ENST00000594067 TMEM100Q9NV29 134 aa14.65□□□□□ -0.06
LIG1-206ENST00000594067 UNC13CQ8NB66 2214 aa14.64□□□□□ -0.07
LIG1-206ENST00000594067 F8VVB4 439 aa14.64□□□□□ -0.07
LIG1-206ENST00000594067 F8VWA3 439 aa14.64□□□□□ -0.07
LIG1-206ENST00000594067 ZNF208O43345 1280 aa14.64□□□□□ -0.07
LIG1-206ENST00000594067 DUX1O43812 170 aa14.64□□□□□ -0.07
LIG1-206ENST00000594067 CD79AP11912 226 aa14.64□□□□□ -0.07
LIG1-206ENST00000594067 PGAM2P15259 253 aa14.64□□□□□ -0.07
LIG1-206ENST00000594067 PVALBP20472 110 aaPredicted RBP14.64□□□□□ -0.07
LIG1-206ENST00000594067 APOBEC1P41238 236 aaKnown RBP14.64□□□□□ -0.07
LIG1-206ENST00000594067 CBX5P45973 191 aa14.64□□□□□ -0.07
LIG1-206ENST00000594067 RAB13P51153 203 aa14.64□□□□□ -0.07
LIG1-206ENST00000594067 CLDN6P56747 220 aa14.64□□□□□ -0.07
LIG1-206ENST00000594067 PTCRAQ6ISU1 281 aaPredicted RBP14.64□□□□□ -0.07
LIG1-206ENST00000594067 COX15Q7KZN9 410 aa14.64□□□□□ -0.07
LIG1-206ENST00000594067 ANGPTL5Q86XS5 388 aa14.64□□□□□ -0.07
LIG1-206ENST00000594067 ZDHHC22Q8N966 263 aa14.64□□□□□ -0.07
LIG1-206ENST00000594067 PLPP5Q8NEB5 264 aa14.64□□□□□ -0.07
LIG1-206ENST00000594067 STOML3Q8TAV4 291 aa14.64□□□□□ -0.07
LIG1-206ENST00000594067 DDIT4LQ96D03 193 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms